RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 LOC101927531A0A1B0GV80 90 aa9.57□□□□□ -0.88
APH1B-207ENST00000559971 PRR4Q16378 134 aa9.55□□□□□ -0.88
APH1B-207ENST00000559971 LIMD2Q9BT23 127 aa9.54□□□□□ -0.88
APH1B-207ENST00000559971 LINC00336Q6ZUF6 198 aa9.53□□□□□ -0.88
APH1B-207ENST00000559971 DNAH2Q9P225 4427 aa9.52□□□□□ -0.89
APH1B-207ENST00000559971 SPINK6Q6UWN8 80 aa9.52□□□□□ -0.89
APH1B-207ENST00000559971 KRTAP10-1P60331 282 aa9.51□□□□□ -0.89
APH1B-207ENST00000559971 SRRM2Q9UQ35 2752 aaKnown RBP9.51□□□□□ -0.89
APH1B-207ENST00000559971 LINC00313P59037 77 aa9.48□□□□□ -0.89
APH1B-207ENST00000559971 ALMS1Q8TCU4 4167 aa9.48□□□□□ -0.89
APH1B-207ENST00000559971 COA5Q86WW8 74 aa9.47□□□□□ -0.89
APH1B-207ENST00000559971 FAM229AH3BQW9 127 aa9.46□□□□□ -0.9
APH1B-207ENST00000559971 PCOTHQ58A44 107 aa9.46□□□□□ -0.9
APH1B-207ENST00000559971 A0A087X002 238 aa9.45□□□□□ -0.9
APH1B-207ENST00000559971 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
APH1B-207ENST00000559971 NOTCH2NLQ7Z3S9 236 aa9.45□□□□□ -0.9
APH1B-207ENST00000559971 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
APH1B-207ENST00000559971 KRTAP13-2Q52LG2 175 aa9.44□□□□□ -0.9
APH1B-207ENST00000559971 BRK1Q8WUW1 75 aa9.44□□□□□ -0.9
APH1B-207ENST00000559971 Q8N9P0 234 aaPredicted RBP9.42□□□□□ -0.9
APH1B-207ENST00000559971 KRTAP13-3Q3SY46 172 aa9.41□□□□□ -0.9
APH1B-207ENST00000559971 DNAH8Q96JB1 4490 aa9.41□□□□□ -0.9
APH1B-207ENST00000559971 SPINK1P00995 79 aa9.4□□□□□ -0.91
APH1B-207ENST00000559971 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
APH1B-207ENST00000559971 RPS29P62273 56 aaKnown RBP9.39□□□□□ -0.91
APH1B-207ENST00000559971 SPAG11AQ6PDA7 123 aa9.36□□□□□ -0.91
APH1B-207ENST00000559971 TYMSOSQ8TAI1 123 aa9.36□□□□□ -0.91
APH1B-207ENST00000559971 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
APH1B-207ENST00000559971 PSPHP1O15172 72 aa9.34□□□□□ -0.91
APH1B-207ENST00000559971 Q5W150 140 aa9.34□□□□□ -0.91
APH1B-207ENST00000559971 SACSQ9NZJ4 4579 aa9.34□□□□□ -0.91
APH1B-207ENST00000559971 ACYP2P14621 99 aa9.34□□□□□ -0.91
APH1B-207ENST00000559971 A8MUN3 132 aa9.32□□□□□ -0.92
APH1B-207ENST00000559971 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
APH1B-207ENST00000559971 HRES1P13985 223 aa9.29□□□□□ -0.92
APH1B-207ENST00000559971 Q5VV11 94 aa9.29□□□□□ -0.92
APH1B-207ENST00000559971 Q75L30 129 aa9.29□□□□□ -0.92
APH1B-207ENST00000559971 IGKV2-30P06310 120 aa9.28□□□□□ -0.92
APH1B-207ENST00000559971 PRR15LQ9BU68 103 aa9.28□□□□□ -0.92
APH1B-207ENST00000559971 KMT2CQ8NEZ4 4911 aaKnown RBP9.28□□□□□ -0.92
APH1B-207ENST00000559971 DNAH11Q96DT5 4516 aa9.27□□□□□ -0.92
APH1B-207ENST00000559971 FRAS1Q86XX4 4008 aa9.27□□□□□ -0.93
APH1B-207ENST00000559971 DNAH5Q8TE73 4624 aa9.27□□□□□ -0.93
APH1B-207ENST00000559971 KRTAP16-1A8MUX0 517 aa9.27□□□□□ -0.93
APH1B-207ENST00000559971 DMAC1Q96GE9 116 aa9.26□□□□□ -0.93
APH1B-207ENST00000559971 HYDINQ4G0P3 5121 aa9.24□□□□□ -0.93
APH1B-207ENST00000559971 CHKB-CPT1BH3BT56 60 aa9.24□□□□□ -0.93
APH1B-207ENST00000559971 LINC00304Q8N9R0 145 aa9.24□□□□□ -0.93
APH1B-207ENST00000559971 RYR2Q92736 4967 aa9.23□□□□□ -0.93
APH1B-207ENST00000559971 PRR26Q8N8Z3 221 aa9.19□□□□□ -0.94
APH1B-207ENST00000559971 PKD1P98161 4303 aa9.16□□□□□ -0.94
APH1B-207ENST00000559971 A6NED7 52 aa9.15□□□□□ -0.95
APH1B-207ENST00000559971 FAT2Q9NYQ8 4349 aa9.13□□□□□ -0.95
APH1B-207ENST00000559971 A0A1B0GVY2 172 aa9.13□□□□□ -0.95
APH1B-207ENST00000559971 ATP11AUNQ6ZP68 121 aa9.09□□□□□ -0.95
APH1B-207ENST00000559971 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
APH1B-207ENST00000559971 RETNLBQ9BQ08 111 aa9.09□□□□□ -0.95
APH1B-207ENST00000559971 CDC42SE1Q9NRR8 79 aa9.09□□□□□ -0.95
APH1B-207ENST00000559971 LRP1BQ9NZR2 4599 aa9.08□□□□□ -0.96
APH1B-207ENST00000559971 RYR3Q15413 4870 aa9.08□□□□□ -0.96
APH1B-207ENST00000559971 IGKV2D-30A0A075B6S6 120 aa9.08□□□□□ -0.96
APH1B-207ENST00000559971 VPS13BQ7Z7G8 4022 aa9.02□□□□□ -0.97
APH1B-207ENST00000559971 SMR3BP02814 79 aaPredicted RBP9.02□□□□□ -0.97
APH1B-207ENST00000559971 C20orf166-AS1Q96NR2 134 aa9.02□□□□□ -0.97
APH1B-207ENST00000559971 A8MUU9 505 aa9.01□□□□□ -0.97
APH1B-207ENST00000559971 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
APH1B-207ENST00000559971 LCA10Q71F78 164 aa8.99□□□□□ -0.97
APH1B-207ENST00000559971 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
APH1B-207ENST00000559971 A0A1B0GU69 56 aa8.97□□□□□ -0.97
APH1B-207ENST00000559971 PMAIP1Q13794 54 aa8.97□□□□□ -0.97
APH1B-207ENST00000559971 PKHD1P08F94 4074 aa8.93□□□□□ -0.98
APH1B-207ENST00000559971 SPINK7P58062 85 aa8.91□□□□□ -0.98
APH1B-207ENST00000559971 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
APH1B-207ENST00000559971 A8MU10 97 aa8.85□□□□□ -0.99
APH1B-207ENST00000559971 SEC61GP60059 68 aa8.85□□□□□ -0.99
APH1B-207ENST00000559971 UQCR11O14957 56 aa8.84□□□□□ -0.99
APH1B-207ENST00000559971 C9orf92A6NGG3 77 aa8.83□□□□□ -1
APH1B-207ENST00000559971 SPATA8Q6RVD6 105 aa8.82□□□□□ -1
APH1B-207ENST00000559971 A6NN06 94 aa8.81□□□□□ -1
APH1B-207ENST00000559971 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
APH1B-207ENST00000559971 Q8N1X5 172 aa8.78□□□□□ -1
APH1B-207ENST00000559971 PKHD1L1Q86WI1 4243 aa8.78□□□□□ -1
APH1B-207ENST00000559971 KRTAP10-8P60410 259 aa8.77□□□□□ -1.01
APH1B-207ENST00000559971 MIR22HGQ0VDD5 57 aa8.76□□□□□ -1.01
APH1B-207ENST00000559971 APOBP04114 4563 aaKnown RBP8.74□□□□□ -1.01
APH1B-207ENST00000559971 EPPK1P58107 5090 aaKnown RBP8.74□□□□□ -1.01
APH1B-207ENST00000559971 Q5VSD8 79 aa8.7□□□□□ -1.02
APH1B-207ENST00000559971 COX6B2Q6YFQ2 88 aa8.69□□□□□ -1.02
APH1B-207ENST00000559971 RYR1P21817 5038 aa8.68□□□□□ -1.02
APH1B-207ENST00000559971 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
APH1B-207ENST00000559971 RPL37P61927 97 aaKnown RBP8.62□□□□□ -1.03
APH1B-207ENST00000559971 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
APH1B-207ENST00000559971 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
APH1B-207ENST00000559971 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
APH1B-207ENST00000559971 HSPG2P98160 4391 aa8.61□□□□□ -1.03
APH1B-207ENST00000559971 FAT1Q14517 4588 aa8.57□□□□□ -1.04
APH1B-207ENST00000559971 A0A1B0GU33 70 aa8.52□□□□□ -1.05
APH1B-207ENST00000559971 XP32Q5T750 250 aa8.51□□□□□ -1.05
APH1B-207ENST00000559971 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
APH1B-207ENST00000559971 HERC2O95714 4834 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms