RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 H3BPC8 53 aa5.95□□□□□ -1.46
LRRC28-216ENST00000559819 NDUFS5O43920 106 aa5.95□□□□□ -1.46
LRRC28-216ENST00000559819 KRTAP10-2P60368 255 aa5.94□□□□□ -1.46
LRRC28-216ENST00000559819 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
LRRC28-216ENST00000559819 CDK2AP2O75956 126 aa5.93□□□□□ -1.46
LRRC28-216ENST00000559819 PCOTHQ58A44 107 aa5.93□□□□□ -1.46
LRRC28-216ENST00000559819 CIRBP-AS1Q8TBR5 109 aa5.93□□□□□ -1.46
LRRC28-216ENST00000559819 BRK1Q8WUW1 75 aa5.93□□□□□ -1.46
LRRC28-216ENST00000559819 HYDINQ4G0P3 5121 aa5.92□□□□□ -1.46
LRRC28-216ENST00000559819 CD164Q04900 197 aa5.92□□□□□ -1.46
LRRC28-216ENST00000559819 SPANXA2-OT1Q8N9U9 137 aa5.92□□□□□ -1.46
LRRC28-216ENST00000559819 PSPHP1O15172 72 aa5.91□□□□□ -1.46
LRRC28-216ENST00000559819 Q1T7F1 81 aa5.91□□□□□ -1.46
LRRC28-216ENST00000559819 LRP1BQ9NZR2 4599 aa5.91□□□□□ -1.46
LRRC28-216ENST00000559819 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.46
LRRC28-216ENST00000559819 TP53AIP1Q9HCN2 124 aa5.9□□□□□ -1.46
LRRC28-216ENST00000559819 FAT2Q9NYQ8 4349 aa5.89□□□□□ -1.47
LRRC28-216ENST00000559819 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
LRRC28-216ENST00000559819 PKD1P98161 4303 aa5.89□□□□□ -1.47
LRRC28-216ENST00000559819 IGLV7-46A0A075B6I9 117 aa5.87□□□□□ -1.47
LRRC28-216ENST00000559819 KRTAP10-1P60331 282 aa5.86□□□□□ -1.47
LRRC28-216ENST00000559819 H3BS24 57 aa5.86□□□□□ -1.47
LRRC28-216ENST00000559819 A8MUN3 132 aa5.85□□□□□ -1.47
LRRC28-216ENST00000559819 COA5Q86WW8 74 aa5.85□□□□□ -1.47
LRRC28-216ENST00000559819 Q5W150 140 aa5.84□□□□□ -1.47
LRRC28-216ENST00000559819 KRTAP13-2Q52LG2 175 aa5.84□□□□□ -1.47
LRRC28-216ENST00000559819 SSBP3-AS1Q7Z2R9 100 aa5.83□□□□□ -1.48
LRRC28-216ENST00000559819 Q8N9P0 234 aaPredicted RBP5.83□□□□□ -1.48
LRRC28-216ENST00000559819 Q5VV11 94 aa5.81□□□□□ -1.48
LRRC28-216ENST00000559819 Q6ZSA8 131 aa5.81□□□□□ -1.48
LRRC28-216ENST00000559819 VPS13BQ7Z7G8 4022 aa5.8□□□□□ -1.48
LRRC28-216ENST00000559819 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
LRRC28-216ENST00000559819 RETNLBQ9BQ08 111 aa5.8□□□□□ -1.48
LRRC28-216ENST00000559819 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
LRRC28-216ENST00000559819 A8MU10 97 aa5.78□□□□□ -1.48
LRRC28-216ENST00000559819 HRES1P13985 223 aa5.77□□□□□ -1.49
LRRC28-216ENST00000559819 LOC101927531A0A1B0GV80 90 aa5.77□□□□□ -1.49
LRRC28-216ENST00000559819 C8orf87E5RJ46 101 aa5.76□□□□□ -1.49
LRRC28-216ENST00000559819 KRTAP1-4P0C5Y4 121 aa5.76□□□□□ -1.49
LRRC28-216ENST00000559819 LINC00313P59037 77 aa5.76□□□□□ -1.49
LRRC28-216ENST00000559819 LIMD2Q9BT23 127 aa5.76□□□□□ -1.49
LRRC28-216ENST00000559819 CHKB-CPT1BH3BT56 60 aa5.75□□□□□ -1.49
LRRC28-216ENST00000559819 SPAG11AQ6PDA7 123 aa5.75□□□□□ -1.49
LRRC28-216ENST00000559819 SACSQ9NZJ4 4579 aa5.73□□□□□ -1.49
LRRC28-216ENST00000559819 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
LRRC28-216ENST00000559819 DYNC1H1Q14204 4646 aaKnown RBP5.71□□□□□ -1.5
LRRC28-216ENST00000559819 PKHD1P08F94 4074 aa5.71□□□□□ -1.5
LRRC28-216ENST00000559819 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
LRRC28-216ENST00000559819 PLA2G1BP04054 148 aaKnown RBP5.69□□□□□ -1.5
LRRC28-216ENST00000559819 Q75L30 129 aa5.69□□□□□ -1.5
LRRC28-216ENST00000559819 FAM229AH3BQW9 127 aa5.68□□□□□ -1.5
LRRC28-216ENST00000559819 RBM12B-AS1Q9P1G2 102 aa5.68□□□□□ -1.5
LRRC28-216ENST00000559819 LINC01558Q9Y6Z2 57 aa5.68□□□□□ -1.5
LRRC28-216ENST00000559819 TYMSOSQ8TAI1 123 aa5.68□□□□□ -1.5
LRRC28-216ENST00000559819 A6NED7 52 aa5.67□□□□□ -1.5
LRRC28-216ENST00000559819 IGKV2-30P06310 120 aa5.67□□□□□ -1.5
LRRC28-216ENST00000559819 LCA10Q71F78 164 aa5.66□□□□□ -1.5
LRRC28-216ENST00000559819 SMR3BP02814 79 aaPredicted RBP5.64□□□□□ -1.51
LRRC28-216ENST00000559819 ACYP2P14621 99 aa5.64□□□□□ -1.51
LRRC28-216ENST00000559819 IGKV2D-30A0A075B6S6 120 aa5.64□□□□□ -1.51
LRRC28-216ENST00000559819 DMAC1Q96GE9 116 aa5.64□□□□□ -1.51
LRRC28-216ENST00000559819 FAT1Q14517 4588 aa5.63□□□□□ -1.51
LRRC28-216ENST00000559819 SPINK7P58062 85 aa5.62□□□□□ -1.51
LRRC28-216ENST00000559819 SPTSSBQ8NFR3 76 aa5.61□□□□□ -1.51
LRRC28-216ENST00000559819 APOBP04114 4563 aaKnown RBP5.61□□□□□ -1.51
LRRC28-216ENST00000559819 SPINK1P00995 79 aa5.61□□□□□ -1.51
LRRC28-216ENST00000559819 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
LRRC28-216ENST00000559819 CDC42SE1Q9NRR8 79 aa5.58□□□□□ -1.52
LRRC28-216ENST00000559819 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
LRRC28-216ENST00000559819 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
LRRC28-216ENST00000559819 C7orf65Q6ZTY9 151 aa5.55□□□□□ -1.52
LRRC28-216ENST00000559819 RYR2Q92736 4967 aa5.55□□□□□ -1.52
LRRC28-216ENST00000559819 ATP11AUNQ6ZP68 121 aa5.54□□□□□ -1.52
LRRC28-216ENST00000559819 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
LRRC28-216ENST00000559819 A0A1B0GVY2 172 aa5.53□□□□□ -1.52
LRRC28-216ENST00000559819 KRTAP10-4P60372 401 aaPredicted RBP5.52□□□□□ -1.53
LRRC28-216ENST00000559819 Q8N1X5 172 aa5.52□□□□□ -1.53
LRRC28-216ENST00000559819 RPS29P62273 56 aaKnown RBP5.5□□□□□ -1.53
LRRC28-216ENST00000559819 A0A1B0GU69 56 aa5.5□□□□□ -1.53
LRRC28-216ENST00000559819 A6NN06 94 aa5.49□□□□□ -1.53
LRRC28-216ENST00000559819 KMT2CQ8NEZ4 4911 aaKnown RBP5.47□□□□□ -1.53
LRRC28-216ENST00000559819 A0A0A0MQY5 61 aa5.46□□□□□ -1.54
LRRC28-216ENST00000559819 A8MUU9 505 aa5.44□□□□□ -1.54
LRRC28-216ENST00000559819 C20orf166-AS1Q96NR2 134 aa5.43□□□□□ -1.54
LRRC28-216ENST00000559819 FAT3Q8TDW7 4589 aa5.42□□□□□ -1.54
LRRC28-216ENST00000559819 LRP1Q07954 4544 aaKnown RBP5.41□□□□□ -1.54
LRRC28-216ENST00000559819 TNXBP22105 4242 aa5.4□□□□□ -1.55
LRRC28-216ENST00000559819 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
LRRC28-216ENST00000559819 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
LRRC28-216ENST00000559819 MIR22HGQ0VDD5 57 aa5.38□□□□□ -1.55
LRRC28-216ENST00000559819 UQCR11O14957 56 aa5.37□□□□□ -1.55
LRRC28-216ENST00000559819 HSPG2P98160 4391 aa5.35□□□□□ -1.55
LRRC28-216ENST00000559819 FLG2Q5D862 2391 aaPredicted RBP5.35□□□□□ -1.55
LRRC28-216ENST00000559819 RYR3Q15413 4870 aa5.33□□□□□ -1.56
LRRC28-216ENST00000559819 RYR1P21817 5038 aa5.31□□□□□ -1.56
LRRC28-216ENST00000559819 ADM2Q7Z4H4 148 aa5.31□□□□□ -1.56
LRRC28-216ENST00000559819 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
LRRC28-216ENST00000559819 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
LRRC28-216ENST00000559819 Q5VSD8 79 aa5.29□□□□□ -1.56
LRRC28-216ENST00000559819 KRTAP10-8P60410 259 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms