RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 USH2AO75445 5202 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 H1FX-AS1Q4G0G2 97 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 FXYD6Q9H0Q3 95 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 CDKN2A-AS1Q9UH64 79 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 TRIOO75962 3097 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 RELNP78509 3460 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 EEA1Q15075 1411 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 SPEGQ15772 3267 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 IQGAP2Q13576 1575 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 SAMD9LQ8IVG5 1584 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 FRYQ5TBA9 3013 aa0.61□□□□□ -2.31
SPG11-218ENST00000559754 LOC400499M0QZD8 3231 aa0.6□□□□□ -2.31
SPG11-218ENST00000559754 LAMA5O15230 3695 aa0.6□□□□□ -2.31
SPG11-218ENST00000559754 DSPP15924 2871 aaKnown RBP0.6□□□□□ -2.31
SPG11-218ENST00000559754 UTP20O75691 2785 aaKnown RBP0.6□□□□□ -2.31
SPG11-218ENST00000559754 C3P01024 1663 aa0.6□□□□□ -2.31
SPG11-218ENST00000559754 DMDP11532 3685 aa0.6□□□□□ -2.31
SPG11-218ENST00000559754 ATXN8Q156A1 80 aa0.6□□□□□ -2.31
SPG11-218ENST00000559754 HILPDAQ9Y5L2 63 aa0.6□□□□□ -2.31
SPG11-218ENST00000559754 TEX15Q9BXT5 2789 aa0.6□□□□□ -2.31
SPG11-218ENST00000559754 PRXQ9BXM0 1461 aa0.6□□□□□ -2.31
SPG11-218ENST00000559754 NBEAL1Q6ZS30 2694 aa0.6□□□□□ -2.31
SPG11-218ENST00000559754 NBEAQ8NFP9 2946 aa0.59□□□□□ -2.31
SPG11-218ENST00000559754 APC2O95996 2303 aa0.59□□□□□ -2.31
SPG11-218ENST00000559754 LMO7Q8WWI1 1683 aa0.59□□□□□ -2.32
SPG11-218ENST00000559754 FRYLO94915 3013 aa0.59□□□□□ -2.32
SPG11-218ENST00000559754 TLN1Q9Y490 2541 aaKnown RBP0.59□□□□□ -2.32
SPG11-218ENST00000559754 PLXNC1O60486 1568 aa0.58□□□□□ -2.32
SPG11-218ENST00000559754 WDFY3Q8IZQ1 3526 aa0.58□□□□□ -2.32
SPG11-218ENST00000559754 NIPBLQ6KC79 2804 aaeCLIP0.58□□□□□ -2.32
SPG11-218ENST00000559754 DMXL2Q8TDJ6 3036 aa0.58□□□□□ -2.32
SPG11-218ENST00000559754 ACACAQ13085 2346 aa0.58□□□□□ -2.32
SPG11-218ENST00000559754 TLN2Q9Y4G6 2542 aa0.58□□□□□ -2.32
SPG11-218ENST00000559754 ABCA6Q8N139 1617 aa0.58□□□□□ -2.32
SPG11-218ENST00000559754 KLK9Q2XQG4 91 aa0.58□□□□□ -2.32
SPG11-218ENST00000559754 COL7A1Q02388 2944 aa0.58□□□□□ -2.32
SPG11-218ENST00000559754 ZZEF1O43149 2961 aa0.58□□□□□ -2.32
SPG11-218ENST00000559754 TRPM2O94759 1503 aa0.58□□□□□ -2.32
SPG11-218ENST00000559754 WNK1Q9H4A3 2382 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 HERC2O95714 4834 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 DMXL1Q9Y485 3027 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 PREX2Q70Z35 1606 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 CFAP46Q8IYW2 2715 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 AKAP6Q13023 2319 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 A0A087WWC5 75 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 U3KQA8 63 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 ABCC6O95255 1503 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 LAMA1P25391 3075 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 TGP01266 2768 aa0.57□□□□□ -2.32
SPG11-218ENST00000559754 CSPG4Q6UVK1 2322 aa0.56□□□□□ -2.32
SPG11-218ENST00000559754 IGF2RP11717 2491 aa0.56□□□□□ -2.32
SPG11-218ENST00000559754 NBPF19A0A087WUL8 3843 aa0.56□□□□□ -2.32
SPG11-218ENST00000559754 LELP1Q5T871 98 aa0.56□□□□□ -2.32
SPG11-218ENST00000559754 GNG13Q9P2W3 67 aa0.56□□□□□ -2.32
SPG11-218ENST00000559754 ATMQ13315 3056 aa0.56□□□□□ -2.32
SPG11-218ENST00000559754 NRXN3Q9Y4C0 1643 aa0.56□□□□□ -2.32
SPG11-218ENST00000559754 ITPR2Q14571 2701 aa0.56□□□□□ -2.32
SPG11-218ENST00000559754 CHD7Q9P2D1 2997 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 MUC12Q9UKN1 5478 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 MAST1Q9Y2H9 1570 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 NDUFA3O95167 84 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 ENHOQ6UWT2 76 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 UBL5Q9BZL1 73 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 KCNQ1DNQ9H478 68 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 KIF1AQ12756 1690 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 ITSN2Q9NZM3 1697 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 CENPEQ02224 2701 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 ACANP16112 2415 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 MGAM2Q2M2H8 2515 aa0.55□□□□□ -2.32
SPG11-218ENST00000559754 MGAQ8IWI9 3026 aa0.54□□□□□ -2.32
SPG11-218ENST00000559754 CLTCL1P53675 1640 aa0.54□□□□□ -2.32
SPG11-218ENST00000559754 LRBAP50851 2863 aa0.54□□□□□ -2.32
SPG11-218ENST00000559754 MRPL33O75394 65 aaKnown RBP0.54□□□□□ -2.32
SPG11-218ENST00000559754 WFDC13Q8IUB5 93 aa0.54□□□□□ -2.32
SPG11-218ENST00000559754 ADGRG4Q8IZF6 3080 aa0.54□□□□□ -2.32
SPG11-218ENST00000559754 NF1P21359 2839 aa0.53□□□□□ -2.32
SPG11-218ENST00000559754 KNL1Q8NG31 2342 aa0.53□□□□□ -2.32
SPG11-218ENST00000559754 DMBT1Q9UGM3 2413 aaPredicted RBP0.53□□□□□ -2.32
SPG11-218ENST00000559754 SPENQ96T58 3664 aaKnown RBP0.53□□□□□ -2.32
SPG11-218ENST00000559754 DEFB131BA0A096LNP1 70 aa0.53□□□□□ -2.32
SPG11-218ENST00000559754 LOC730098B7Z3J9 87 aa0.53□□□□□ -2.32
SPG11-218ENST00000559754 C3orf79P0CE67 100 aa0.53□□□□□ -2.32
SPG11-218ENST00000559754 CSMD2Q7Z408 3487 aa0.53□□□□□ -2.32
SPG11-218ENST00000559754 CRYBG3Q68DQ2 2970 aa0.53□□□□□ -2.33
SPG11-218ENST00000559754 VPS13CQ709C8 3753 aa0.53□□□□□ -2.33
SPG11-218ENST00000559754 WNK2Q9Y3S1 2297 aa0.52□□□□□ -2.33
SPG11-218ENST00000559754 Q9Y3F1 56 aa0.52□□□□□ -2.33
SPG11-218ENST00000559754 MAP1AP78559 2803 aaPredicted RBP0.52□□□□□ -2.33
SPG11-218ENST00000559754 ALS2Q96Q42 1657 aa0.52□□□□□ -2.33
SPG11-218ENST00000559754 SVEP1Q4LDE5 3571 aa0.52□□□□□ -2.33
SPG11-218ENST00000559754 DCHS2Q6V1P9 2916 aa0.51□□□□□ -2.33
SPG11-218ENST00000559754 LY75O60449 1722 aa0.5□□□□□ -2.33
SPG11-218ENST00000559754 DUOX1Q9NRD9 1551 aa0.5□□□□□ -2.33
SPG11-218ENST00000559754 DEFB114Q30KQ6 69 aa0.5□□□□□ -2.33
SPG11-218ENST00000559754 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
SPG11-218ENST00000559754 S100ZQ8WXG8 99 aa0.5□□□□□ -2.33
SPG11-218ENST00000559754 TACC2O95359 2948 aa0.49□□□□□ -2.33
SPG11-218ENST00000559754 LINC00158P58513 81 aa0.49□□□□□ -2.33
SPG11-218ENST00000559754 CUBNO60494 3623 aa0.49□□□□□ -2.33
SPG11-218ENST00000559754 CDC42BPAQ5VT25 1732 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms