RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 TRBV20-1A0A075B6N2 111 aa9.69□□□□□ -0.86
KNSTRN-208ENST00000559604 J3QR89 54 aa9.69□□□□□ -0.86
KNSTRN-208ENST00000559604 SCGB1C2P0DMR2 95 aa9.69□□□□□ -0.86
KNSTRN-208ENST00000559604 LINC00472Q9H8W2 130 aa9.69□□□□□ -0.86
KNSTRN-208ENST00000559604 DEFB116Q30KQ4 102 aa9.68□□□□□ -0.86
KNSTRN-208ENST00000559604 NOTCH2NLQ7Z3S9 236 aa9.68□□□□□ -0.86
KNSTRN-208ENST00000559604 CCKP06307 115 aa9.67□□□□□ -0.86
KNSTRN-208ENST00000559604 LYRM7Q5U5X0 104 aa9.66□□□□□ -0.86
KNSTRN-208ENST00000559604 TRACP01848 142 aa9.65□□□□□ -0.86
KNSTRN-208ENST00000559604 KRTAP9-8Q9BYQ0 159 aa9.65□□□□□ -0.86
KNSTRN-208ENST00000559604 SCGB1A1P11684 91 aa9.64□□□□□ -0.87
KNSTRN-208ENST00000559604 USH2AO75445 5202 aa9.61□□□□□ -0.87
KNSTRN-208ENST00000559604 IGHV6-1A0A0B4J1U7 121 aa9.61□□□□□ -0.87
KNSTRN-208ENST00000559604 C21orf62-AS1Q17RA5 79 aa9.6□□□□□ -0.87
KNSTRN-208ENST00000559604 HRES1P13985 223 aa9.58□□□□□ -0.88
KNSTRN-208ENST00000559604 MPLKIPQ8TAP9 179 aa9.58□□□□□ -0.88
KNSTRN-208ENST00000559604 NAA38Q9BRA0 125 aaKnown RBP9.57□□□□□ -0.88
KNSTRN-208ENST00000559604 SSPOA2VEC9 5147 aa9.57□□□□□ -0.88
KNSTRN-208ENST00000559604 RBM3P98179 157 aaKnown RBP9.56□□□□□ -0.88
KNSTRN-208ENST00000559604 ATXN8Q156A1 80 aa9.56□□□□□ -0.88
KNSTRN-208ENST00000559604 FAM236DA0A1B0GTK5 79 aa9.55□□□□□ -0.88
KNSTRN-208ENST00000559604 FAM236CP0DP71 79 aa9.55□□□□□ -0.88
KNSTRN-208ENST00000559604 A0A1B0GVX0 72 aa9.54□□□□□ -0.88
KNSTRN-208ENST00000559604 DSCR8Q96T75 97 aa9.53□□□□□ -0.88
KNSTRN-208ENST00000559604 PRO0461Q9UI25 63 aa9.53□□□□□ -0.88
KNSTRN-208ENST00000559604 C8orf87E5RJ46 101 aa9.52□□□□□ -0.89
KNSTRN-208ENST00000559604 RBM12B-AS1Q9P1G2 102 aa9.52□□□□□ -0.89
KNSTRN-208ENST00000559604 MT2AP02795 61 aa9.5□□□□□ -0.89
KNSTRN-208ENST00000559604 BAALC-AS2P0C853 105 aa9.5□□□□□ -0.89
KNSTRN-208ENST00000559604 C9JAW5 83 aa9.47□□□□□ -0.89
KNSTRN-208ENST00000559604 Q6ZQT0 140 aa9.46□□□□□ -0.9
KNSTRN-208ENST00000559604 J3KT08 172 aa9.45□□□□□ -0.9
KNSTRN-208ENST00000559604 ETDBQ3ZM63 59 aa9.45□□□□□ -0.9
KNSTRN-208ENST00000559604 MTURNQ8N3F0 131 aa9.45□□□□□ -0.9
KNSTRN-208ENST00000559604 ZCCHC13Q8WW36 166 aaKnown RBP9.44□□□□□ -0.9
KNSTRN-208ENST00000559604 MT1FP04733 61 aa9.42□□□□□ -0.9
KNSTRN-208ENST00000559604 JMJD7-PLA2G4BH0Y9G9 81 aa9.39□□□□□ -0.91
KNSTRN-208ENST00000559604 Q8N9P0 234 aaPredicted RBP9.39□□□□□ -0.91
KNSTRN-208ENST00000559604 SMCPP49901 116 aaPredicted RBP9.38□□□□□ -0.91
KNSTRN-208ENST00000559604 SPINK7P58062 85 aa9.38□□□□□ -0.91
KNSTRN-208ENST00000559604 NDUFB1O75438 58 aa9.37□□□□□ -0.91
KNSTRN-208ENST00000559604 LOC110117498A0A087WWA1 95 aa9.36□□□□□ -0.91
KNSTRN-208ENST00000559604 H3BT86 120 aa9.36□□□□□ -0.91
KNSTRN-208ENST00000559604 A8MWP4 228 aa9.35□□□□□ -0.91
KNSTRN-208ENST00000559604 LCE2BO14633 110 aa9.35□□□□□ -0.91
KNSTRN-208ENST00000559604 KRTAP9-3Q9BYQ3 159 aa9.35□□□□□ -0.91
KNSTRN-208ENST00000559604 A0A1B0GW54 56 aa9.34□□□□□ -0.91
KNSTRN-208ENST00000559604 KRTAP10-10P60014 251 aa9.34□□□□□ -0.91
KNSTRN-208ENST00000559604 C8orf17Q9NRJ1 99 aa9.34□□□□□ -0.91
KNSTRN-208ENST00000559604 FCGBPQ9Y6R7 5405 aaPredicted RBP9.34□□□□□ -0.91
KNSTRN-208ENST00000559604 IGKV3D-7A0A0C4DH55 119 aa9.33□□□□□ -0.92
KNSTRN-208ENST00000559604 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.33□□□□□ -0.92
KNSTRN-208ENST00000559604 PDE6GP18545 87 aa9.33□□□□□ -0.92
KNSTRN-208ENST00000559604 C14orf132Q9NPU4 83 aa9.31□□□□□ -0.92
KNSTRN-208ENST00000559604 Q6ZVQ6 151 aa9.26□□□□□ -0.93
KNSTRN-208ENST00000559604 WFDC13Q8IUB5 93 aa9.25□□□□□ -0.93
KNSTRN-208ENST00000559604 PRR15Q8IV56 129 aa9.25□□□□□ -0.93
KNSTRN-208ENST00000559604 KRTAP9-7A8MTY7 169 aa9.24□□□□□ -0.93
KNSTRN-208ENST00000559604 KRTAP19-1Q8IUB9 90 aa9.24□□□□□ -0.93
KNSTRN-208ENST00000559604 FAM240AA0A1B0GVK7 77 aa9.23□□□□□ -0.93
KNSTRN-208ENST00000559604 NREPQ16612 68 aa9.22□□□□□ -0.93
KNSTRN-208ENST00000559604 MMP24-AS1A0A0U1RRL7 71 aa9.2□□□□□ -0.94
KNSTRN-208ENST00000559604 ACYP1P07311 99 aa9.2□□□□□ -0.94
KNSTRN-208ENST00000559604 MT-ATP8P03928 68 aa9.19□□□□□ -0.94
KNSTRN-208ENST00000559604 TMEM254Q8TBM7 123 aa9.18□□□□□ -0.94
KNSTRN-208ENST00000559604 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
KNSTRN-208ENST00000559604 K7EQZ3 153 aa9.14□□□□□ -0.95
KNSTRN-208ENST00000559604 hDV103S1A0JD37 113 aa9.12□□□□□ -0.95
KNSTRN-208ENST00000559604 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
KNSTRN-208ENST00000559604 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
KNSTRN-208ENST00000559604 MACF1Q9UPN3 7388 aaKnown RBP9.12□□□□□ -0.95
KNSTRN-208ENST00000559604 SYNE2Q8WXH0 6885 aaKnown RBP9.09□□□□□ -0.96
KNSTRN-208ENST00000559604 NDUFS5O43920 106 aa9.08□□□□□ -0.96
KNSTRN-208ENST00000559604 H1FX-AS1Q4G0G2 97 aa9.06□□□□□ -0.96
KNSTRN-208ENST00000559604 BPY2O14599 106 aa9.04□□□□□ -0.96
KNSTRN-208ENST00000559604 KRTAP19-6Q3LI70 58 aa9.03□□□□□ -0.96
KNSTRN-208ENST00000559604 Q5W150 140 aa9.03□□□□□ -0.96
KNSTRN-208ENST00000559604 LINC00643Q86TS7 51 aa9.03□□□□□ -0.96
KNSTRN-208ENST00000559604 IGKV2D-30A0A075B6S6 120 aa9.01□□□□□ -0.97
KNSTRN-208ENST00000559604 IGKV2-30P06310 120 aa9.01□□□□□ -0.97
KNSTRN-208ENST00000559604 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
KNSTRN-208ENST00000559604 Q8N9L7 120 aa8.98□□□□□ -0.97
KNSTRN-208ENST00000559604 LINC00846Q9NV44 126 aa8.97□□□□□ -0.97
KNSTRN-208ENST00000559604 UBL5Q9BZL1 73 aa8.96□□□□□ -0.98
KNSTRN-208ENST00000559604 CASC2Q6XLA1 102 aa8.95□□□□□ -0.98
KNSTRN-208ENST00000559604 HCG22E2RYF7 251 aa8.93□□□□□ -0.98
KNSTRN-208ENST00000559604 C4orf26Q17RF5 130 aa8.88□□□□□ -0.99
KNSTRN-208ENST00000559604 CXCL6P80162 114 aa8.87□□□□□ -0.99
KNSTRN-208ENST00000559604 CCDC179H3BU77 68 aa8.85□□□□□ -0.99
KNSTRN-208ENST00000559604 FAM236AA0A1B0GUQ0 79 aa8.84□□□□□ -0.99
KNSTRN-208ENST00000559604 FAM236BA0A1B0GV22 79 aa8.84□□□□□ -0.99
KNSTRN-208ENST00000559604 ATOX1O00244 68 aa8.84□□□□□ -0.99
KNSTRN-208ENST00000559604 UQCRQO14949 82 aa8.84□□□□□ -0.99
KNSTRN-208ENST00000559604 ATP5EP2Q5VTU8 51 aa8.84□□□□□ -0.99
KNSTRN-208ENST00000559604 SVIPQ8NHG7 77 aa8.83□□□□□ -1
KNSTRN-208ENST00000559604 HIST1H4AP62805 103 aaKnown RBP8.82□□□□□ -1
KNSTRN-208ENST00000559604 COX7CP15954 63 aa8.78□□□□□ -1
KNSTRN-208ENST00000559604 KRTAP3-1Q9BYR8 98 aa8.78□□□□□ -1
KNSTRN-208ENST00000559604 C5orf47Q569G3 176 aa8.75□□□□□ -1.01
KNSTRN-208ENST00000559604 SERP2Q8N6R1 65 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms