RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 RIF1Q5UIP0 2472 aaKnown RBP1.29□□□□□ -2.2
RGPD1-204ENST00000559485 ALMS1Q8TCU4 4167 aa1.29□□□□□ -2.2
RGPD1-204ENST00000559485 HIVEP2P31629 2446 aa1.29□□□□□ -2.2
RGPD1-204ENST00000559485 HIVEP3Q5T1R4 2406 aa1.29□□□□□ -2.2
RGPD1-204ENST00000559485 BDP1A6H8Y1 2624 aa1.28□□□□□ -2.2
RGPD1-204ENST00000559485 KMT2BQ9UMN6 2715 aaPredicted RBP1.28□□□□□ -2.2
RGPD1-204ENST00000559485 CHD6Q8TD26 2715 aa1.28□□□□□ -2.21
RGPD1-204ENST00000559485 LCE4AQ5TA78 99 aa1.27□□□□□ -2.21
RGPD1-204ENST00000559485 TTC28Q96AY4 2481 aa1.27□□□□□ -2.21
RGPD1-204ENST00000559485 NBASA2RRP1 2371 aa1.27□□□□□ -2.21
RGPD1-204ENST00000559485 IGF2RP11717 2491 aa1.27□□□□□ -2.21
RGPD1-204ENST00000559485 TPRXLQ17RH7 258 aa1.27□□□□□ -2.21
RGPD1-204ENST00000559485 CACNA1AO00555 2505 aa1.27□□□□□ -2.21
RGPD1-204ENST00000559485 VPS13DQ5THJ4 4388 aa1.26□□□□□ -2.21
RGPD1-204ENST00000559485 FRAS1Q86XX4 4008 aa1.26□□□□□ -2.21
RGPD1-204ENST00000559485 KRTAP13-2Q52LG2 175 aa1.26□□□□□ -2.21
RGPD1-204ENST00000559485 SPTAN1Q13813 2472 aaKnown RBP1.26□□□□□ -2.21
RGPD1-204ENST00000559485 ANKRD11Q6UB99 2663 aaPredicted RBP1.26□□□□□ -2.21
RGPD1-204ENST00000559485 DNAH7Q8WXX0 4024 aa1.26□□□□□ -2.21
RGPD1-204ENST00000559485 TLN1Q9Y490 2541 aaKnown RBP1.26□□□□□ -2.21
RGPD1-204ENST00000559485 OBSCNQ5VST9 7968 aa1.26□□□□□ -2.21
RGPD1-204ENST00000559485 FAM208BQ5VWN6 2430 aa1.25□□□□□ -2.21
RGPD1-204ENST00000559485 C9orf92A6NGG3 77 aa1.25□□□□□ -2.21
RGPD1-204ENST00000559485 R4GN34 69 aa1.25□□□□□ -2.21
RGPD1-204ENST00000559485 Q5VSD8 79 aa1.25□□□□□ -2.21
RGPD1-204ENST00000559485 NAV2Q8IVL1 2488 aa1.25□□□□□ -2.21
RGPD1-204ENST00000559485 ANKRD17O75179 2603 aaKnown RBP1.25□□□□□ -2.21
RGPD1-204ENST00000559485 VWFP04275 2813 aa1.25□□□□□ -2.21
RGPD1-204ENST00000559485 NIPBLQ6KC79 2804 aaeCLIP1.25□□□□□ -2.21
RGPD1-204ENST00000559485 DNAH1Q9P2D7 4330 aa1.25□□□□□ -2.21
RGPD1-204ENST00000559485 NF1P21359 2839 aa1.24□□□□□ -2.21
RGPD1-204ENST00000559485 PRRC2CQ9Y520 2896 aaKnown RBP1.24□□□□□ -2.21
RGPD1-204ENST00000559485 ZNF292O60281 2723 aa1.24□□□□□ -2.21
RGPD1-204ENST00000559485 KRTAP10-1P60331 282 aa1.24□□□□□ -2.21
RGPD1-204ENST00000559485 F8P00451 2351 aa1.24□□□□□ -2.21
RGPD1-204ENST00000559485 TNP1P09430 55 aa1.24□□□□□ -2.21
RGPD1-204ENST00000559485 KRTAP10-2P60368 255 aa1.23□□□□□ -2.21
RGPD1-204ENST00000559485 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
RGPD1-204ENST00000559485 CMYA5Q8N3K9 4069 aa1.23□□□□□ -2.21
RGPD1-204ENST00000559485 CSPG4Q6UVK1 2322 aa1.23□□□□□ -2.21
RGPD1-204ENST00000559485 NCOR2Q9Y618 2525 aa1.23□□□□□ -2.21
RGPD1-204ENST00000559485 SORL1Q92673 2214 aa1.23□□□□□ -2.21
RGPD1-204ENST00000559485 HUWE1Q7Z6Z7 4374 aaKnown RBP1.23□□□□□ -2.21
RGPD1-204ENST00000559485 KRTAP1-4P0C5Y4 121 aa1.23□□□□□ -2.21
RGPD1-204ENST00000559485 ZNF462Q96JM2 2506 aa1.23□□□□□ -2.21
RGPD1-204ENST00000559485 KRTAP13-4Q3LI77 160 aa1.22□□□□□ -2.21
RGPD1-204ENST00000559485 KMT2AQ03164 3969 aa1.22□□□□□ -2.21
RGPD1-204ENST00000559485 CREBBPQ92793 2442 aa1.22□□□□□ -2.21
RGPD1-204ENST00000559485 SPG11Q96JI7 2443 aa1.22□□□□□ -2.21
RGPD1-204ENST00000559485 DNAH6Q9C0G6 4158 aa1.22□□□□□ -2.21
RGPD1-204ENST00000559485 SMR3BP02814 79 aaPredicted RBP1.22□□□□□ -2.21
RGPD1-204ENST00000559485 HRNRQ86YZ3 2850 aaPredicted RBP1.21□□□□□ -2.22
RGPD1-204ENST00000559485 KRTAP12-2P59991 146 aa1.21□□□□□ -2.22
RGPD1-204ENST00000559485 SONP18583 2426 aaKnown RBP1.21□□□□□ -2.22
RGPD1-204ENST00000559485 TNXBP22105 4242 aa1.21□□□□□ -2.22
RGPD1-204ENST00000559485 CEP295Q9C0D2 2601 aa1.2□□□□□ -2.22
RGPD1-204ENST00000559485 DYNC2H1Q8NCM8 4307 aaKnown RBP1.2□□□□□ -2.22
RGPD1-204ENST00000559485 KRTAP19-4Q3LI73 84 aa1.2□□□□□ -2.22
RGPD1-204ENST00000559485 LCE5AQ5TCM9 118 aa1.2□□□□□ -2.22
RGPD1-204ENST00000559485 MYO18BQ8IUG5 2567 aa1.2□□□□□ -2.22
RGPD1-204ENST00000559485 DNHD1Q96M86 4753 aa1.2□□□□□ -2.22
RGPD1-204ENST00000559485 KRTAP12-1P59990 96 aa1.2□□□□□ -2.22
RGPD1-204ENST00000559485 ACACBO00763 2458 aa1.2□□□□□ -2.22
RGPD1-204ENST00000559485 CCDC168Q8NDH2 2452 aa1.2□□□□□ -2.22
RGPD1-204ENST00000559485 KRTAP5-2Q701N4 177 aa1.19□□□□□ -2.22
RGPD1-204ENST00000559485 PRKDCP78527 4128 aaKnown RBP1.19□□□□□ -2.22
RGPD1-204ENST00000559485 DNAH3Q8TD57 4116 aa1.19□□□□□ -2.22
RGPD1-204ENST00000559485 UBR5O95071 2799 aaPredicted RBP1.19□□□□□ -2.22
RGPD1-204ENST00000559485 KRTAP3-1Q9BYR8 98 aa1.19□□□□□ -2.22
RGPD1-204ENST00000559485 NOTCH2Q04721 2471 aa1.19□□□□□ -2.22
RGPD1-204ENST00000559485 PIEZO1Q92508 2521 aa1.19□□□□□ -2.22
RGPD1-204ENST00000559485 PDZD2O15018 2839 aa1.18□□□□□ -2.22
RGPD1-204ENST00000559485 HECTD4Q9Y4D8 3996 aa1.18□□□□□ -2.22
RGPD1-204ENST00000559485 USP24Q9UPU5 2620 aa1.18□□□□□ -2.22
RGPD1-204ENST00000559485 TENM2Q9NT68 2774 aa1.18□□□□□ -2.22
RGPD1-204ENST00000559485 ITPR3Q14573 2671 aa1.18□□□□□ -2.22
RGPD1-204ENST00000559485 DNAH10Q8IVF4 4471 aa1.17□□□□□ -2.22
RGPD1-204ENST00000559485 FN1P02751 2386 aaKnown RBP1.17□□□□□ -2.22
RGPD1-204ENST00000559485 KRTAP10-6P60371 365 aaPredicted RBP1.17□□□□□ -2.22
RGPD1-204ENST00000559485 DNAH2Q9P225 4427 aa1.17□□□□□ -2.22
RGPD1-204ENST00000559485 IGSF10Q6WRI0 2623 aa1.17□□□□□ -2.22
RGPD1-204ENST00000559485 GPR98Q8WXG9 6306 aa1.17□□□□□ -2.22
RGPD1-204ENST00000559485 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.17□□□□□ -2.22
RGPD1-204ENST00000559485 PTPN13Q12923 2485 aa1.17□□□□□ -2.22
RGPD1-204ENST00000559485 ZFYVE26Q68DK2 2539 aa1.17□□□□□ -2.22
RGPD1-204ENST00000559485 USP9XQ93008 2570 aaPredicted RBP1.17□□□□□ -2.22
RGPD1-204ENST00000559485 MAP1AP78559 2803 aaPredicted RBP1.16□□□□□ -2.22
RGPD1-204ENST00000559485 LRRK2Q5S007 2527 aa1.16□□□□□ -2.22
RGPD1-204ENST00000559485 DNAH8Q96JB1 4490 aa1.16□□□□□ -2.22
RGPD1-204ENST00000559485 DNAH17Q9UFH2 4485 aa1.16□□□□□ -2.22
RGPD1-204ENST00000559485 FLNAP21333 2647 aaKnown RBP1.16□□□□□ -2.22
RGPD1-204ENST00000559485 A0A1B0GVY2 172 aa1.16□□□□□ -2.22
RGPD1-204ENST00000559485 SPTBN4Q9H254 2564 aa1.16□□□□□ -2.22
RGPD1-204ENST00000559485 C2CD3Q4AC94 2353 aa1.16□□□□□ -2.22
RGPD1-204ENST00000559485 USP9YO00507 2555 aaPredicted RBP1.16□□□□□ -2.22
RGPD1-204ENST00000559485 DNAH9Q9NYC9 4486 aa1.15□□□□□ -2.22
RGPD1-204ENST00000559485 CHD8Q9HCK8 2581 aa1.15□□□□□ -2.22
RGPD1-204ENST00000559485 TLN2Q9Y4G6 2542 aa1.15□□□□□ -2.22
RGPD1-204ENST00000559485 POLQO75417 2590 aa1.15□□□□□ -2.22
RGPD1-204ENST00000559485 ACANP16112 2415 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms