RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-213ENST00000559399 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
LRRC28-213ENST00000559399 C8orf87E5RJ46 101 aa7.43□□□□□ -1.22
LRRC28-213ENST00000559399 VPS25Q9BRG1 176 aa7.43□□□□□ -1.22
LRRC28-213ENST00000559399 PYY3Q5JQD4 70 aa7.42□□□□□ -1.22
LRRC28-213ENST00000559399 A0A1B0GVX0 72 aa7.41□□□□□ -1.22
LRRC28-213ENST00000559399 MT1FP04733 61 aa7.4□□□□□ -1.22
LRRC28-213ENST00000559399 RBM3P98179 157 aaKnown RBP7.4□□□□□ -1.22
LRRC28-213ENST00000559399 DSCR8Q96T75 97 aa7.39□□□□□ -1.23
LRRC28-213ENST00000559399 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
LRRC28-213ENST00000559399 SCGB1C2P0DMR2 95 aa7.37□□□□□ -1.23
LRRC28-213ENST00000559399 MTURNQ8N3F0 131 aa7.37□□□□□ -1.23
LRRC28-213ENST00000559399 UQCR10Q9UDW1 63 aa7.37□□□□□ -1.23
LRRC28-213ENST00000559399 J3KT08 172 aa7.36□□□□□ -1.23
LRRC28-213ENST00000559399 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
LRRC28-213ENST00000559399 C21orf62-AS1Q17RA5 79 aa7.36□□□□□ -1.23
LRRC28-213ENST00000559399 ZCCHC13Q8WW36 166 aaKnown RBP7.36□□□□□ -1.23
LRRC28-213ENST00000559399 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
LRRC28-213ENST00000559399 C9JAW5 83 aa7.33□□□□□ -1.24
LRRC28-213ENST00000559399 SPINK7P58062 85 aa7.33□□□□□ -1.24
LRRC28-213ENST00000559399 BAALC-AS2P0C853 105 aa7.31□□□□□ -1.24
LRRC28-213ENST00000559399 Q6ZQT0 140 aa7.31□□□□□ -1.24
LRRC28-213ENST00000559399 NDUFB1O75438 58 aa7.3□□□□□ -1.24
LRRC28-213ENST00000559399 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
LRRC28-213ENST00000559399 Q8N9P0 234 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-213ENST00000559399 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
LRRC28-213ENST00000559399 A8MWP4 228 aa7.26□□□□□ -1.25
LRRC28-213ENST00000559399 LYRM7Q5U5X0 104 aa7.26□□□□□ -1.25
LRRC28-213ENST00000559399 WFDC13Q8IUB5 93 aa7.25□□□□□ -1.25
LRRC28-213ENST00000559399 C8orf17Q9NRJ1 99 aa7.25□□□□□ -1.25
LRRC28-213ENST00000559399 A0A1B0GW54 56 aa7.24□□□□□ -1.25
LRRC28-213ENST00000559399 JMJD7-PLA2G4BH0Y9G9 81 aa7.24□□□□□ -1.25
LRRC28-213ENST00000559399 LOC110117498A0A087WWA1 95 aa7.23□□□□□ -1.25
LRRC28-213ENST00000559399 ATXN8Q156A1 80 aa7.23□□□□□ -1.25
LRRC28-213ENST00000559399 TMA7Q9Y2S6 64 aaKnown RBP7.23□□□□□ -1.25
LRRC28-213ENST00000559399 IGKV3D-7A0A0C4DH55 119 aa7.22□□□□□ -1.25
LRRC28-213ENST00000559399 PDE6GP18545 87 aa7.2□□□□□ -1.26
LRRC28-213ENST00000559399 Q6ZVQ6 151 aa7.2□□□□□ -1.26
LRRC28-213ENST00000559399 NAA38Q9BRA0 125 aaKnown RBP7.19□□□□□ -1.26
LRRC28-213ENST00000559399 M0R143 59 aa7.18□□□□□ -1.26
LRRC28-213ENST00000559399 PRR15Q8IV56 129 aa7.17□□□□□ -1.26
LRRC28-213ENST00000559399 C14orf132Q9NPU4 83 aa7.17□□□□□ -1.26
LRRC28-213ENST00000559399 LINC00846Q9NV44 126 aa7.17□□□□□ -1.26
LRRC28-213ENST00000559399 NREPQ16612 68 aa7.14□□□□□ -1.27
LRRC28-213ENST00000559399 KRTAP19-6Q3LI70 58 aa7.13□□□□□ -1.27
LRRC28-213ENST00000559399 TMEM254Q8TBM7 123 aa7.13□□□□□ -1.27
LRRC28-213ENST00000559399 MRPL34Q9BQ48 92 aaKnown RBP7.13□□□□□ -1.27
LRRC28-213ENST00000559399 MMP24-AS1A0A0U1RRL7 71 aa7.12□□□□□ -1.27
LRRC28-213ENST00000559399 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
LRRC28-213ENST00000559399 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
LRRC28-213ENST00000559399 hDV103S1A0JD37 113 aa7.07□□□□□ -1.28
LRRC28-213ENST00000559399 K7EQZ3 153 aa7.07□□□□□ -1.28
LRRC28-213ENST00000559399 NDUFS5O43920 106 aa7.07□□□□□ -1.28
LRRC28-213ENST00000559399 SYNE2Q8WXH0 6885 aaKnown RBP7.04□□□□□ -1.28
LRRC28-213ENST00000559399 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
LRRC28-213ENST00000559399 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.29
LRRC28-213ENST00000559399 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
LRRC28-213ENST00000559399 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
LRRC28-213ENST00000559399 H3BT86 120 aa7□□□□□ -1.29
LRRC28-213ENST00000559399 BPY2O14599 106 aa7□□□□□ -1.29
LRRC28-213ENST00000559399 SMIM6P0DI80 62 aa7□□□□□ -1.29
LRRC28-213ENST00000559399 BATFQ16520 125 aa6.99□□□□□ -1.29
LRRC28-213ENST00000559399 Q5W150 140 aa6.98□□□□□ -1.29
LRRC28-213ENST00000559399 TSTD3H0UI37 97 aa6.95□□□□□ -1.3
LRRC28-213ENST00000559399 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
LRRC28-213ENST00000559399 C9orf118A6NHY6 69 aa6.93□□□□□ -1.3
LRRC28-213ENST00000559399 Q8N9L7 120 aa6.93□□□□□ -1.3
LRRC28-213ENST00000559399 A0A1W2PPM0 123 aa6.92□□□□□ -1.3
LRRC28-213ENST00000559399 HCG22E2RYF7 251 aa6.92□□□□□ -1.3
LRRC28-213ENST00000559399 C4orf26Q17RF5 130 aa6.91□□□□□ -1.3
LRRC28-213ENST00000559399 H3BS24 57 aa6.9□□□□□ -1.3
LRRC28-213ENST00000559399 TAX1BP3O14907 124 aa6.89□□□□□ -1.31
LRRC28-213ENST00000559399 CXCL6P80162 114 aa6.89□□□□□ -1.31
LRRC28-213ENST00000559399 KRTAP6-3Q3LI67 103 aa6.89□□□□□ -1.31
LRRC28-213ENST00000559399 C5orf47Q569G3 176 aa6.85□□□□□ -1.31
LRRC28-213ENST00000559399 FAM236AA0A1B0GUQ0 79 aa6.83□□□□□ -1.32
LRRC28-213ENST00000559399 FAM236BA0A1B0GV22 79 aa6.83□□□□□ -1.32
LRRC28-213ENST00000559399 SPCS1Q9Y6A9 102 aa6.82□□□□□ -1.32
LRRC28-213ENST00000559399 UBL5Q9BZL1 73 aa6.8□□□□□ -1.32
LRRC28-213ENST00000559399 S4R3F8 94 aa6.8□□□□□ -1.32
LRRC28-213ENST00000559399 KRTAP3-1Q9BYR8 98 aa6.78□□□□□ -1.32
LRRC28-213ENST00000559399 CSAG1Q6PB30 78 aa6.77□□□□□ -1.33
LRRC28-213ENST00000559399 C1orf64Q8NEQ6 169 aa6.76□□□□□ -1.33
LRRC28-213ENST00000559399 A6NN06 94 aa6.75□□□□□ -1.33
LRRC28-213ENST00000559399 Q5VV11 94 aa6.75□□□□□ -1.33
LRRC28-213ENST00000559399 MT1BP07438 61 aa6.74□□□□□ -1.33
LRRC28-213ENST00000559399 LCA10Q71F78 164 aa6.74□□□□□ -1.33
LRRC28-213ENST00000559399 SPRR2GQ9BYE4 73 aa6.73□□□□□ -1.33
LRRC28-213ENST00000559399 KRTAP19-8Q3LI54 63 aa6.71□□□□□ -1.34
LRRC28-213ENST00000559399 TP53AIP1Q9HCN2 124 aa6.71□□□□□ -1.34
LRRC28-213ENST00000559399 PRO0461Q9UI25 63 aa6.71□□□□□ -1.34
LRRC28-213ENST00000559399 LOC105371267A0A1B0GV96 52 aa6.68□□□□□ -1.34
LRRC28-213ENST00000559399 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
LRRC28-213ENST00000559399 NEBP20929 6669 aa6.67□□□□□ -1.34
LRRC28-213ENST00000559399 K7EP34 96 aa6.66□□□□□ -1.34
LRRC28-213ENST00000559399 KLKP1Q107X0 134 aa6.66□□□□□ -1.34
LRRC28-213ENST00000559399 COL5A1-AS1Q5SY13 56 aa6.65□□□□□ -1.34
LRRC28-213ENST00000559399 LCE3BQ5TA77 95 aa6.65□□□□□ -1.34
LRRC28-213ENST00000559399 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
LRRC28-213ENST00000559399 KRTAP9-9Q9BYP9 154 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms