RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SFTA3P0C7M3 94 aa-0.18□□□□□ -2.44
GABPB1-209ENST00000559100 PKD1L2Q7Z442 2459 aa-0.18□□□□□ -2.44
GABPB1-209ENST00000559100 FAT3Q8TDW7 4589 aa-0.19□□□□□ -2.44
GABPB1-209ENST00000559100 ANKRD36CQ5JPF3 1778 aa-0.19□□□□□ -2.44
GABPB1-209ENST00000559100 NBEAQ8NFP9 2946 aa-0.19□□□□□ -2.44
GABPB1-209ENST00000559100 H3BUA1 57 aa-0.19□□□□□ -2.44
GABPB1-209ENST00000559100 RPS27P42677 84 aaKnown RBP-0.19□□□□□ -2.44
GABPB1-209ENST00000559100 RPS27LQ71UM5 84 aaKnown RBP-0.19□□□□□ -2.44
GABPB1-209ENST00000559100 DSTQ03001 7570 aaKnown RBP-0.19□□□□□ -2.44
GABPB1-209ENST00000559100 LRRK2Q5S007 2527 aa-0.19□□□□□ -2.44
GABPB1-209ENST00000559100 DNAH6Q9C0G6 4158 aa-0.2□□□□□ -2.44
GABPB1-209ENST00000559100 C3P01024 1663 aa-0.2□□□□□ -2.44
GABPB1-209ENST00000559100 K7EMI3 77 aa-0.2□□□□□ -2.44
GABPB1-209ENST00000559100 DEFB110Q30KQ9 67 aa-0.2□□□□□ -2.44
GABPB1-209ENST00000559100 EFCAB5A4FU69 1503 aa-0.2□□□□□ -2.44
GABPB1-209ENST00000559100 ITSN2Q9NZM3 1697 aa-0.21□□□□□ -2.44
GABPB1-209ENST00000559100 WDR87Q6ZQQ6 2873 aa-0.21□□□□□ -2.44
GABPB1-209ENST00000559100 KRTAP19-8Q3LI54 63 aa-0.21□□□□□ -2.44
GABPB1-209ENST00000559100 KIF1AQ12756 1690 aa-0.21□□□□□ -2.44
GABPB1-209ENST00000559100 TEP1Q99973 2627 aaKnown RBP-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 DNAH3Q8TD57 4116 aa-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 MROH1Q8NDA8 1641 aa-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 MADDQ8WXG6 1647 aa-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 A0A087WWC5 75 aa-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 M0R1W7 72 aa-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 MT1AP04731 61 aa-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 SERF2P84101 59 aa-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 NMES1Q9C002 83 aa-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 VPS13DQ5THJ4 4388 aa-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.22□□□□□ -2.44
GABPB1-209ENST00000559100 KMT2CQ8NEZ4 4911 aaKnown RBP-0.23□□□□□ -2.45
GABPB1-209ENST00000559100 MUC12Q9UKN1 5478 aa-0.23□□□□□ -2.45
GABPB1-209ENST00000559100 S100ZQ8WXG8 99 aa-0.23□□□□□ -2.45
GABPB1-209ENST00000559100 SPRR2FQ96RM1 72 aa-0.23□□□□□ -2.45
GABPB1-209ENST00000559100 TOGARAM1Q9Y4F4 1720 aa-0.24□□□□□ -2.45
GABPB1-209ENST00000559100 NOP10Q9NPE3 64 aaKnown RBP-0.24□□□□□ -2.45
GABPB1-209ENST00000559100 LAMA1P25391 3075 aa-0.24□□□□□ -2.45
GABPB1-209ENST00000559100 ANK3Q12955 4377 aaKnown RBP-0.24□□□□□ -2.45
GABPB1-209ENST00000559100 PKHD1L1Q86WI1 4243 aa-0.25□□□□□ -2.45
GABPB1-209ENST00000559100 APOBP04114 4563 aaKnown RBP-0.25□□□□□ -2.45
GABPB1-209ENST00000559100 IGLV5-48A0A075B6I7 105 aa-0.25□□□□□ -2.45
GABPB1-209ENST00000559100 ABRACLQ9P1F3 81 aa-0.25□□□□□ -2.45
GABPB1-209ENST00000559100 PCLOQ9Y6V0 5065 aa-0.25□□□□□ -2.45
GABPB1-209ENST00000559100 TRIOO75962 3097 aa-0.25□□□□□ -2.45
GABPB1-209ENST00000559100 RANBP2P49792 3224 aaKnown RBP-0.25□□□□□ -2.45
GABPB1-209ENST00000559100 ITPR3Q14573 2671 aa-0.26□□□□□ -2.45
GABPB1-209ENST00000559100 SMIM5Q71RC9 77 aa-0.26□□□□□ -2.45
GABPB1-209ENST00000559100 SPENQ96T58 3664 aaKnown RBP-0.26□□□□□ -2.45
GABPB1-209ENST00000559100 NBEAL2Q6ZNJ1 2754 aa-0.26□□□□□ -2.45
GABPB1-209ENST00000559100 MYO18BQ8IUG5 2567 aa-0.26□□□□□ -2.45
GABPB1-209ENST00000559100 MGAM2Q2M2H8 2515 aa-0.26□□□□□ -2.45
GABPB1-209ENST00000559100 ACACAQ13085 2346 aa-0.26□□□□□ -2.45
GABPB1-209ENST00000559100 CCDC180Q9P1Z9 1646 aa-0.27□□□□□ -2.45
GABPB1-209ENST00000559100 STARD9Q9P2P6 4700 aa-0.27□□□□□ -2.45
GABPB1-209ENST00000559100 MMP24-AS1A0A0U1RRL7 71 aa-0.27□□□□□ -2.45
GABPB1-209ENST00000559100 TMEM167BQ9NRX6 74 aa-0.27□□□□□ -2.45
GABPB1-209ENST00000559100 DNAH11Q96DT5 4516 aa-0.28□□□□□ -2.45
GABPB1-209ENST00000559100 EEA1Q15075 1411 aa-0.28□□□□□ -2.45
GABPB1-209ENST00000559100 HERC1Q15751 4861 aa-0.28□□□□□ -2.45
GABPB1-209ENST00000559100 SMIM31A0A1B0GVY4 71 aa-0.28□□□□□ -2.45
GABPB1-209ENST00000559100 CLASP1Q7Z460 1538 aa-0.28□□□□□ -2.45
GABPB1-209ENST00000559100 SACSQ9NZJ4 4579 aa-0.28□□□□□ -2.45
GABPB1-209ENST00000559100 CCDC168Q8NDH2 2452 aa-0.29□□□□□ -2.46
GABPB1-209ENST00000559100 LINC00308Q8TCZ7 52 aa-0.29□□□□□ -2.46
GABPB1-209ENST00000559100 ABCA6Q8N139 1617 aa-0.29□□□□□ -2.46
GABPB1-209ENST00000559100 FAM186AA6NE01 2351 aa-0.3□□□□□ -2.46
GABPB1-209ENST00000559100 USP9YO00507 2555 aaPredicted RBP-0.3□□□□□ -2.46
GABPB1-209ENST00000559100 TIAM1Q13009 1591 aa-0.3□□□□□ -2.46
GABPB1-209ENST00000559100 TNP1P09430 55 aa-0.3□□□□□ -2.46
GABPB1-209ENST00000559100 CDC42BPAQ5VT25 1732 aa-0.3□□□□□ -2.46
GABPB1-209ENST00000559100 DNAH1Q9P2D7 4330 aa-0.3□□□□□ -2.46
GABPB1-209ENST00000559100 CROCC2H7BZ55 1655 aa-0.3□□□□□ -2.46
GABPB1-209ENST00000559100 ACACBO00763 2458 aa-0.31□□□□□ -2.46
GABPB1-209ENST00000559100 CPS1P31327 1500 aa-0.31□□□□□ -2.46
GABPB1-209ENST00000559100 SMIM27A0A1W2PRY6 76 aa-0.31□□□□□ -2.46
GABPB1-209ENST00000559100 KAAG1Q9UBP8 84 aa-0.31□□□□□ -2.46
GABPB1-209ENST00000559100 LY75O60449 1722 aa-0.31□□□□□ -2.46
GABPB1-209ENST00000559100 FAT1Q14517 4588 aa-0.32□□□□□ -2.46
GABPB1-209ENST00000559100 SPTBN5Q9NRC6 3674 aaKnown RBP-0.32□□□□□ -2.46
GABPB1-209ENST00000559100 RELNP78509 3460 aa-0.32□□□□□ -2.46
GABPB1-209ENST00000559100 IGIPA6NJ69 53 aa-0.32□□□□□ -2.46
GABPB1-209ENST00000559100 UBR4Q5T4S7 5183 aa-0.32□□□□□ -2.46
GABPB1-209ENST00000559100 A0A0C4DFX4 3053 aa-0.32□□□□□ -2.46
GABPB1-209ENST00000559100 GLI2P10070 1586 aa-0.32□□□□□ -2.46
GABPB1-209ENST00000559100 UGGT1Q9NYU2 1555 aa-0.32□□□□□ -2.46
GABPB1-209ENST00000559100 M0QY20 66 aa-0.33□□□□□ -2.46
GABPB1-209ENST00000559100 ABCA10Q8WWZ4 1543 aa-0.33□□□□□ -2.46
GABPB1-209ENST00000559100 RIF1Q5UIP0 2472 aaKnown RBP-0.33□□□□□ -2.46
GABPB1-209ENST00000559100 MUC17Q685J3 4493 aa-0.34□□□□□ -2.46
GABPB1-209ENST00000559100 H0YGX0 51 aa-0.34□□□□□ -2.46
GABPB1-209ENST00000559100 KRTAP20-2Q3LI61 65 aa-0.34□□□□□ -2.46
GABPB1-209ENST00000559100 CLPSL2Q6UWE3 100 aa-0.34□□□□□ -2.46
GABPB1-209ENST00000559100 DNAH2Q9P225 4427 aa-0.35□□□□□ -2.47
GABPB1-209ENST00000559100 WFDC10BQ8IUB3 73 aa-0.35□□□□□ -2.47
GABPB1-209ENST00000559100 USH2AO75445 5202 aa-0.35□□□□□ -2.47
GABPB1-209ENST00000559100 FRYQ5TBA9 3013 aa-0.35□□□□□ -2.47
GABPB1-209ENST00000559100 A0A1B0GUL6 1792 aa-0.36□□□□□ -2.47
GABPB1-209ENST00000559100 EFCAB6Q5THR3 1501 aa-0.36□□□□□ -2.47
GABPB1-209ENST00000559100 DEFB1P60022 68 aa-0.36□□□□□ -2.47
GABPB1-209ENST00000559100 COL12A1Q99715 3063 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms