RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 PRR15LQ9BU68 103 aa3.86□□□□□ -1.79
AC087516.2-201ENST00000558963 C8orf17Q9NRJ1 99 aa3.86□□□□□ -1.79
AC087516.2-201ENST00000558963 CHKB-CPT1BH3BT56 60 aa3.86□□□□□ -1.79
AC087516.2-201ENST00000558963 PLECQ15149 4684 aaKnown RBP3.85□□□□□ -1.79
AC087516.2-201ENST00000558963 RTL8CO15255 209 aa3.85□□□□□ -1.79
AC087516.2-201ENST00000558963 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
AC087516.2-201ENST00000558963 COL7A1Q02388 2944 aa3.85□□□□□ -1.79
AC087516.2-201ENST00000558963 DNAH2Q9P225 4427 aa3.84□□□□□ -1.79
AC087516.2-201ENST00000558963 KRTAP13-3Q3SY46 172 aa3.84□□□□□ -1.79
AC087516.2-201ENST00000558963 LCA10Q71F78 164 aa3.84□□□□□ -1.79
AC087516.2-201ENST00000558963 LCE2AQ5TA79 106 aaPredicted RBP3.84□□□□□ -1.8
AC087516.2-201ENST00000558963 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.8
AC087516.2-201ENST00000558963 PSORS1C2Q9UIG4 136 aa3.84□□□□□ -1.8
AC087516.2-201ENST00000558963 HECTD4Q9Y4D8 3996 aa3.84□□□□□ -1.8
AC087516.2-201ENST00000558963 C8orf87E5RJ46 101 aa3.83□□□□□ -1.8
AC087516.2-201ENST00000558963 SSBP3-AS1Q7Z2R9 100 aa3.83□□□□□ -1.8
AC087516.2-201ENST00000558963 DNAH8Q96JB1 4490 aa3.83□□□□□ -1.8
AC087516.2-201ENST00000558963 A8MU10 97 aa3.83□□□□□ -1.8
AC087516.2-201ENST00000558963 MRPL34Q9BQ48 92 aaKnown RBP3.83□□□□□ -1.8
AC087516.2-201ENST00000558963 A6NN06 94 aa3.82□□□□□ -1.8
AC087516.2-201ENST00000558963 NDUFS5O43920 106 aa3.82□□□□□ -1.8
AC087516.2-201ENST00000558963 MEGF8Q7Z7M0 2845 aa3.82□□□□□ -1.8
AC087516.2-201ENST00000558963 IGLV7-43P04211 117 aa3.81□□□□□ -1.8
AC087516.2-201ENST00000558963 A6NED7 52 aa3.81□□□□□ -1.8
AC087516.2-201ENST00000558963 HRES1P13985 223 aa3.81□□□□□ -1.8
AC087516.2-201ENST00000558963 XP32Q5T750 250 aa3.81□□□□□ -1.8
AC087516.2-201ENST00000558963 Q6ZSA8 131 aa3.81□□□□□ -1.8
AC087516.2-201ENST00000558963 BIRC6Q9NR09 4857 aa3.8□□□□□ -1.8
AC087516.2-201ENST00000558963 PCOTHQ58A44 107 aa3.8□□□□□ -1.8
AC087516.2-201ENST00000558963 STARD9Q9P2P6 4700 aa3.79□□□□□ -1.8
AC087516.2-201ENST00000558963 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
AC087516.2-201ENST00000558963 C1orf134Q5TEV5 83 aa3.78□□□□□ -1.8
AC087516.2-201ENST00000558963 H3BS24 57 aa3.78□□□□□ -1.8
AC087516.2-201ENST00000558963 CDK2AP2O75956 126 aa3.78□□□□□ -1.8
AC087516.2-201ENST00000558963 IGHV6-1A0A0B4J1U7 121 aa3.77□□□□□ -1.81
AC087516.2-201ENST00000558963 SRRM2Q9UQ35 2752 aaKnown RBP3.77□□□□□ -1.81
AC087516.2-201ENST00000558963 SPAG11AQ6PDA7 123 aa3.77□□□□□ -1.81
AC087516.2-201ENST00000558963 PRR26Q8N8Z3 221 aa3.77□□□□□ -1.81
AC087516.2-201ENST00000558963 LORP23490 312 aaPredicted RBP3.76□□□□□ -1.81
AC087516.2-201ENST00000558963 FRAS1Q86XX4 4008 aa3.76□□□□□ -1.81
AC087516.2-201ENST00000558963 C7orf65Q6ZTY9 151 aa3.76□□□□□ -1.81
AC087516.2-201ENST00000558963 RPS29P62273 56 aaKnown RBP3.75□□□□□ -1.81
AC087516.2-201ENST00000558963 SPTSSBQ8NFR3 76 aa3.75□□□□□ -1.81
AC087516.2-201ENST00000558963 A0A087X002 238 aa3.75□□□□□ -1.81
AC087516.2-201ENST00000558963 ACYP2P14621 99 aa3.75□□□□□ -1.81
AC087516.2-201ENST00000558963 NOTCH2NLQ7Z3S9 236 aa3.75□□□□□ -1.81
AC087516.2-201ENST00000558963 SPINK7P58062 85 aa3.74□□□□□ -1.81
AC087516.2-201ENST00000558963 DMAC1Q96GE9 116 aa3.74□□□□□ -1.81
AC087516.2-201ENST00000558963 RBM12B-AS1Q9P1G2 102 aa3.74□□□□□ -1.81
AC087516.2-201ENST00000558963 FAM229AH3BQW9 127 aa3.73□□□□□ -1.81
AC087516.2-201ENST00000558963 Q5W150 140 aa3.73□□□□□ -1.81
AC087516.2-201ENST00000558963 DNAH11Q96DT5 4516 aa3.73□□□□□ -1.81
AC087516.2-201ENST00000558963 KRTAP16-1A8MUX0 517 aa3.73□□□□□ -1.81
AC087516.2-201ENST00000558963 RYR2Q92736 4967 aa3.72□□□□□ -1.81
AC087516.2-201ENST00000558963 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.82
AC087516.2-201ENST00000558963 CIRBP-AS1Q8TBR5 109 aa3.71□□□□□ -1.82
AC087516.2-201ENST00000558963 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
AC087516.2-201ENST00000558963 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
AC087516.2-201ENST00000558963 DNAH5Q8TE73 4624 aa3.7□□□□□ -1.82
AC087516.2-201ENST00000558963 IGKV2-30P06310 120 aa3.7□□□□□ -1.82
AC087516.2-201ENST00000558963 KRTAP1-4P0C5Y4 121 aa3.7□□□□□ -1.82
AC087516.2-201ENST00000558963 KRTAP13-2Q52LG2 175 aa3.7□□□□□ -1.82
AC087516.2-201ENST00000558963 PKD1P98161 4303 aa3.7□□□□□ -1.82
AC087516.2-201ENST00000558963 LINC00313P59037 77 aa3.69□□□□□ -1.82
AC087516.2-201ENST00000558963 SACSQ9NZJ4 4579 aa3.69□□□□□ -1.82
AC087516.2-201ENST00000558963 SPATA8Q6RVD6 105 aa3.68□□□□□ -1.82
AC087516.2-201ENST00000558963 KMT2AQ03164 3969 aa3.68□□□□□ -1.82
AC087516.2-201ENST00000558963 ANAPC11Q9NYG5 84 aa3.68□□□□□ -1.82
AC087516.2-201ENST00000558963 SPINK1P00995 79 aa3.67□□□□□ -1.82
AC087516.2-201ENST00000558963 PLA2G1BP04054 148 aaKnown RBP3.67□□□□□ -1.82
AC087516.2-201ENST00000558963 KRTAP10-2P60368 255 aa3.67□□□□□ -1.82
AC087516.2-201ENST00000558963 FAT2Q9NYQ8 4349 aa3.67□□□□□ -1.82
AC087516.2-201ENST00000558963 SPINK6Q6UWN8 80 aa3.65□□□□□ -1.82
AC087516.2-201ENST00000558963 KRTAP10-1P60331 282 aa3.65□□□□□ -1.83
AC087516.2-201ENST00000558963 A0A1B0GU69 56 aa3.65□□□□□ -1.83
AC087516.2-201ENST00000558963 HERC2O95714 4834 aa3.64□□□□□ -1.83
AC087516.2-201ENST00000558963 LY6G6CO95867 125 aa3.63□□□□□ -1.83
AC087516.2-201ENST00000558963 A0A1B0GVY2 172 aa3.63□□□□□ -1.83
AC087516.2-201ENST00000558963 IGKV2D-30A0A075B6S6 120 aa3.62□□□□□ -1.83
AC087516.2-201ENST00000558963 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
AC087516.2-201ENST00000558963 UQCR11O14957 56 aa3.62□□□□□ -1.83
AC087516.2-201ENST00000558963 RYR3Q15413 4870 aa3.62□□□□□ -1.83
AC087516.2-201ENST00000558963 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
AC087516.2-201ENST00000558963 KRTAP17-1Q9BYP8 105 aa3.6□□□□□ -1.83
AC087516.2-201ENST00000558963 LRP1BQ9NZR2 4599 aa3.59□□□□□ -1.84
AC087516.2-201ENST00000558963 C20orf166-AS1Q96NR2 134 aa3.58□□□□□ -1.84
AC087516.2-201ENST00000558963 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
AC087516.2-201ENST00000558963 A8MUU9 505 aa3.57□□□□□ -1.84
AC087516.2-201ENST00000558963 KMT2CQ8NEZ4 4911 aaKnown RBP3.57□□□□□ -1.84
AC087516.2-201ENST00000558963 KRTAP10-4P60372 401 aaPredicted RBP3.56□□□□□ -1.84
AC087516.2-201ENST00000558963 LINC00304Q8N9R0 145 aa3.56□□□□□ -1.84
AC087516.2-201ENST00000558963 VPS13BQ7Z7G8 4022 aa3.56□□□□□ -1.84
AC087516.2-201ENST00000558963 PKHD1P08F94 4074 aa3.55□□□□□ -1.84
AC087516.2-201ENST00000558963 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
AC087516.2-201ENST00000558963 DYNC1H1Q14204 4646 aaKnown RBP3.55□□□□□ -1.84
AC087516.2-201ENST00000558963 LINC01554Q52M75 96 aa3.54□□□□□ -1.84
AC087516.2-201ENST00000558963 RETNLBQ9BQ08 111 aa3.54□□□□□ -1.84
AC087516.2-201ENST00000558963 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
AC087516.2-201ENST00000558963 ADM2Q7Z4H4 148 aa3.54□□□□□ -1.84
AC087516.2-201ENST00000558963 HYDINQ4G0P3 5121 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms