RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 K7EQZ3 153 aa4.65□□□□□ -1.67
LRRC28-211ENST00000558890 ZNF861PO60384 105 aa4.65□□□□□ -1.67
LRRC28-211ENST00000558890 IGLV7-43P04211 117 aa4.65□□□□□ -1.67
LRRC28-211ENST00000558890 ATP5EP56381 51 aaPredicted RBP4.65□□□□□ -1.67
LRRC28-211ENST00000558890 DSCR10P59022 87 aa4.65□□□□□ -1.67
LRRC28-211ENST00000558890 TMEM254Q8TBM7 123 aa4.65□□□□□ -1.67
LRRC28-211ENST00000558890 OCR1Q9BZK8 76 aa4.65□□□□□ -1.67
LRRC28-211ENST00000558890 SNURFQ9Y675 71 aa4.65□□□□□ -1.67
LRRC28-211ENST00000558890 SPINK6Q6UWN8 80 aa4.64□□□□□ -1.67
LRRC28-211ENST00000558890 A0A0G2JQZ4 141 aa4.63□□□□□ -1.67
LRRC28-211ENST00000558890 H7BZZ5 65 aa4.63□□□□□ -1.67
LRRC28-211ENST00000558890 IGLV9-49A0A0B4J1Y8 123 aa4.61□□□□□ -1.67
LRRC28-211ENST00000558890 A0A0U1RQV1 116 aa4.61□□□□□ -1.67
LRRC28-211ENST00000558890 LINC00483Q53H64 154 aa4.61□□□□□ -1.67
LRRC28-211ENST00000558890 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
LRRC28-211ENST00000558890 A8MWP4 228 aa4.6□□□□□ -1.67
LRRC28-211ENST00000558890 NDUFB1O75438 58 aa4.59□□□□□ -1.67
LRRC28-211ENST00000558890 DEFB116Q30KQ4 102 aa4.59□□□□□ -1.67
LRRC28-211ENST00000558890 C5orf47Q569G3 176 aa4.59□□□□□ -1.67
LRRC28-211ENST00000558890 WFDC13Q8IUB5 93 aa4.59□□□□□ -1.67
LRRC28-211ENST00000558890 FAM229BQ4G0N7 80 aa4.58□□□□□ -1.68
LRRC28-211ENST00000558890 CASC2Q6XLA1 102 aa4.58□□□□□ -1.68
LRRC28-211ENST00000558890 PRR15Q8IV56 129 aa4.58□□□□□ -1.68
LRRC28-211ENST00000558890 LINC00472Q9H8W2 130 aa4.58□□□□□ -1.68
LRRC28-211ENST00000558890 KRTAP29-1A8MX34 341 aaPredicted RBP4.57□□□□□ -1.68
LRRC28-211ENST00000558890 MP68P56378 58 aa4.57□□□□□ -1.68
LRRC28-211ENST00000558890 MOBPQ13875 183 aa4.57□□□□□ -1.68
LRRC28-211ENST00000558890 HMCN2Q8NDA2 5059 aa4.56□□□□□ -1.68
LRRC28-211ENST00000558890 OXTP01178 125 aa4.55□□□□□ -1.68
LRRC28-211ENST00000558890 KRTAP1-4P0C5Y4 121 aa4.55□□□□□ -1.68
LRRC28-211ENST00000558890 MT1HL1P0DM35 61 aa4.55□□□□□ -1.68
LRRC28-211ENST00000558890 H3BPC8 53 aa4.54□□□□□ -1.68
LRRC28-211ENST00000558890 HRCT1Q6UXD1 115 aa4.53□□□□□ -1.68
LRRC28-211ENST00000558890 SMIM26A0A096LP01 95 aa4.52□□□□□ -1.69
LRRC28-211ENST00000558890 MMP24-AS1A0A0U1RRL7 71 aa4.52□□□□□ -1.69
LRRC28-211ENST00000558890 H0Y9P7 68 aa4.52□□□□□ -1.69
LRRC28-211ENST00000558890 ZCCHC13Q8WW36 166 aaKnown RBP4.52□□□□□ -1.69
LRRC28-211ENST00000558890 hDV103S1A0JD37 113 aa4.51□□□□□ -1.69
LRRC28-211ENST00000558890 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
LRRC28-211ENST00000558890 A0A1B0GVX0 72 aa4.5□□□□□ -1.69
LRRC28-211ENST00000558890 CD164Q04900 197 aa4.5□□□□□ -1.69
LRRC28-211ENST00000558890 SSBP3-AS1Q7Z2R9 100 aa4.5□□□□□ -1.69
LRRC28-211ENST00000558890 Q96NJ1 140 aa4.5□□□□□ -1.69
LRRC28-211ENST00000558890 TP53AIP1Q9HCN2 124 aa4.5□□□□□ -1.69
LRRC28-211ENST00000558890 C8orf17Q9NRJ1 99 aa4.5□□□□□ -1.69
LRRC28-211ENST00000558890 RPS29P62273 56 aaKnown RBP4.49□□□□□ -1.69
LRRC28-211ENST00000558890 LINC00208Q96KT6 92 aa4.49□□□□□ -1.69
LRRC28-211ENST00000558890 ANAPC11Q9NYG5 84 aa4.49□□□□□ -1.69
LRRC28-211ENST00000558890 IGHV6-1A0A0B4J1U7 121 aa4.48□□□□□ -1.69
LRRC28-211ENST00000558890 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
LRRC28-211ENST00000558890 Q5XG85 94 aa4.47□□□□□ -1.69
LRRC28-211ENST00000558890 SPAG11AQ6PDA7 123 aa4.47□□□□□ -1.69
LRRC28-211ENST00000558890 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
LRRC28-211ENST00000558890 CYP4F30PQ9H0H9 118 aa4.47□□□□□ -1.69
LRRC28-211ENST00000558890 A0A087X002 238 aa4.46□□□□□ -1.7
LRRC28-211ENST00000558890 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
LRRC28-211ENST00000558890 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
LRRC28-211ENST00000558890 C8orf87E5RJ46 101 aa4.45□□□□□ -1.7
LRRC28-211ENST00000558890 NDUFS5O43920 106 aa4.45□□□□□ -1.7
LRRC28-211ENST00000558890 ASB16-AS1Q495Z4 193 aa4.45□□□□□ -1.7
LRRC28-211ENST00000558890 KRTAP13-2Q52LG2 175 aa4.45□□□□□ -1.7
LRRC28-211ENST00000558890 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
LRRC28-211ENST00000558890 TYMSOSQ8TAI1 123 aa4.45□□□□□ -1.7
LRRC28-211ENST00000558890 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
LRRC28-211ENST00000558890 LRP2P98164 4655 aa4.44□□□□□ -1.7
LRRC28-211ENST00000558890 SPINK1P00995 79 aa4.43□□□□□ -1.7
LRRC28-211ENST00000558890 C4orf26Q17RF5 130 aa4.43□□□□□ -1.7
LRRC28-211ENST00000558890 PRR26Q8N8Z3 221 aa4.43□□□□□ -1.7
LRRC28-211ENST00000558890 LIMD2Q9BT23 127 aa4.43□□□□□ -1.7
LRRC28-211ENST00000558890 PRR4Q16378 134 aa4.42□□□□□ -1.7
LRRC28-211ENST00000558890 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
LRRC28-211ENST00000558890 FP248Q71RG6 208 aaPredicted RBP4.42□□□□□ -1.7
LRRC28-211ENST00000558890 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
LRRC28-211ENST00000558890 LINC00304Q8N9R0 145 aa4.41□□□□□ -1.7
LRRC28-211ENST00000558890 LOC101927531A0A1B0GV80 90 aa4.39□□□□□ -1.71
LRRC28-211ENST00000558890 MPLKIPQ8TAP9 179 aa4.39□□□□□ -1.71
LRRC28-211ENST00000558890 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
LRRC28-211ENST00000558890 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
LRRC28-211ENST00000558890 V9GYY9 64 aa4.38□□□□□ -1.71
LRRC28-211ENST00000558890 LPAP08519 4548 aa4.38□□□□□ -1.71
LRRC28-211ENST00000558890 IGLV7-46A0A075B6I9 117 aa4.37□□□□□ -1.71
LRRC28-211ENST00000558890 PCOTHQ58A44 107 aa4.37□□□□□ -1.71
LRRC28-211ENST00000558890 KRTAP19-1Q8IUB9 90 aa4.37□□□□□ -1.71
LRRC28-211ENST00000558890 LINC00313P59037 77 aa4.36□□□□□ -1.71
LRRC28-211ENST00000558890 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
LRRC28-211ENST00000558890 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
LRRC28-211ENST00000558890 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
LRRC28-211ENST00000558890 C1orf195Q5TG92 126 aa4.35□□□□□ -1.71
LRRC28-211ENST00000558890 Q1T7F1 81 aa4.34□□□□□ -1.71
LRRC28-211ENST00000558890 COA5Q86WW8 74 aa4.33□□□□□ -1.72
LRRC28-211ENST00000558890 RNF213Q63HN8 5207 aa4.32□□□□□ -1.72
LRRC28-211ENST00000558890 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-211ENST00000558890 KRTAP13-3Q3SY46 172 aa4.3□□□□□ -1.72
LRRC28-211ENST00000558890 Q5W150 140 aa4.3□□□□□ -1.72
LRRC28-211ENST00000558890 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
LRRC28-211ENST00000558890 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
LRRC28-211ENST00000558890 MUC17Q685J3 4493 aa4.28□□□□□ -1.72
LRRC28-211ENST00000558890 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
LRRC28-211ENST00000558890 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
LRRC28-211ENST00000558890 PSPHP1O15172 72 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms