RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
CDC42BPB-203ENST00000558867 IGLV9-49A0A0B4J1Y8 123 aa8.97□□□□□ -0.97
CDC42BPB-203ENST00000558867 C9orf153Q5TBE3 101 aa8.97□□□□□ -0.97
CDC42BPB-203ENST00000558867 SSBP3-AS1Q7Z2R9 100 aa8.97□□□□□ -0.97
CDC42BPB-203ENST00000558867 A0A087WSZ3 146 aa8.94□□□□□ -0.98
CDC42BPB-203ENST00000558867 A0A0G2JQZ4 141 aa8.94□□□□□ -0.98
CDC42BPB-203ENST00000558867 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
CDC42BPB-203ENST00000558867 HIST1H4AP62805 103 aaKnown RBP8.94□□□□□ -0.98
CDC42BPB-203ENST00000558867 CD164Q04900 197 aa8.94□□□□□ -0.98
CDC42BPB-203ENST00000558867 MOBPQ13875 183 aa8.94□□□□□ -0.98
CDC42BPB-203ENST00000558867 KRTAP4-1Q9BYQ7 146 aa8.94□□□□□ -0.98
CDC42BPB-203ENST00000558867 BPY2O14599 106 aa8.93□□□□□ -0.98
CDC42BPB-203ENST00000558867 PCP4P48539 62 aa8.91□□□□□ -0.98
CDC42BPB-203ENST00000558867 SS18L2Q9UHA2 77 aa8.91□□□□□ -0.98
CDC42BPB-203ENST00000558867 XP32Q5T750 250 aa8.9□□□□□ -0.98
CDC42BPB-203ENST00000558867 FAM236AA0A1B0GUQ0 79 aa8.89□□□□□ -0.99
CDC42BPB-203ENST00000558867 FAM236BA0A1B0GV22 79 aa8.89□□□□□ -0.99
CDC42BPB-203ENST00000558867 LINC00472Q9H8W2 130 aa8.87□□□□□ -0.99
CDC42BPB-203ENST00000558867 IGKV4-1P06312 121 aa8.86□□□□□ -0.99
CDC42BPB-203ENST00000558867 A0A087WVE0 104 aa8.85□□□□□ -0.99
CDC42BPB-203ENST00000558867 J3KT08 172 aa8.85□□□□□ -0.99
CDC42BPB-203ENST00000558867 DSCR10P59022 87 aa8.85□□□□□ -0.99
CDC42BPB-203ENST00000558867 ATOX1O00244 68 aa8.84□□□□□ -0.99
CDC42BPB-203ENST00000558867 Q5XG85 94 aa8.83□□□□□ -1
CDC42BPB-203ENST00000558867 LCE2CQ5TA81 110 aa8.81□□□□□ -1
CDC42BPB-203ENST00000558867 Q96NJ1 140 aa8.81□□□□□ -1
CDC42BPB-203ENST00000558867 ANAPC13Q9BS18 74 aa8.81□□□□□ -1
CDC42BPB-203ENST00000558867 MT1HP80294 61 aa8.78□□□□□ -1
CDC42BPB-203ENST00000558867 A8MWP4 228 aa8.77□□□□□ -1.01
CDC42BPB-203ENST00000558867 K7EQZ3 153 aa8.77□□□□□ -1.01
CDC42BPB-203ENST00000558867 HRCT1Q6UXD1 115 aa8.77□□□□□ -1.01
CDC42BPB-203ENST00000558867 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
CDC42BPB-203ENST00000558867 Q8N9L7 120 aa8.77□□□□□ -1.01
CDC42BPB-203ENST00000558867 PCOTHQ58A44 107 aa8.75□□□□□ -1.01
CDC42BPB-203ENST00000558867 PRR15Q8IV56 129 aa8.75□□□□□ -1.01
CDC42BPB-203ENST00000558867 LIMD2Q9BT23 127 aa8.75□□□□□ -1.01
CDC42BPB-203ENST00000558867 M0R2T5 61 aa8.73□□□□□ -1.01
CDC42BPB-203ENST00000558867 NDUFB1O75438 58 aa8.72□□□□□ -1.01
CDC42BPB-203ENST00000558867 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
CDC42BPB-203ENST00000558867 SERP2Q8N6R1 65 aa8.72□□□□□ -1.01
CDC42BPB-203ENST00000558867 KRTAP19-2Q3LHN2 52 aa8.71□□□□□ -1.02
CDC42BPB-203ENST00000558867 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
CDC42BPB-203ENST00000558867 TRAV7A0A075B6U4 112 aa8.69□□□□□ -1.02
CDC42BPB-203ENST00000558867 COX7CP15954 63 aa8.69□□□□□ -1.02
CDC42BPB-203ENST00000558867 LORP23490 312 aaPredicted RBP8.69□□□□□ -1.02
CDC42BPB-203ENST00000558867 KRTAP10-6P60371 365 aaPredicted RBP8.69□□□□□ -1.02
CDC42BPB-203ENST00000558867 UQCRQO14949 82 aa8.68□□□□□ -1.02
CDC42BPB-203ENST00000558867 C9orf92A6NGG3 77 aa8.67□□□□□ -1.02
CDC42BPB-203ENST00000558867 A0A1B0GVX0 72 aa8.66□□□□□ -1.02
CDC42BPB-203ENST00000558867 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
CDC42BPB-203ENST00000558867 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
CDC42BPB-203ENST00000558867 C1orf195Q5TG92 126 aa8.64□□□□□ -1.03
CDC42BPB-203ENST00000558867 OCR1Q9BZK8 76 aa8.64□□□□□ -1.03
CDC42BPB-203ENST00000558867 CASC2Q6XLA1 102 aa8.61□□□□□ -1.03
CDC42BPB-203ENST00000558867 C8orf17Q9NRJ1 99 aa8.61□□□□□ -1.03
CDC42BPB-203ENST00000558867 C8orf87E5RJ46 101 aa8.6□□□□□ -1.03
CDC42BPB-203ENST00000558867 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
CDC42BPB-203ENST00000558867 hDV103S1A0JD37 113 aa8.57□□□□□ -1.04
CDC42BPB-203ENST00000558867 WFDC13Q8IUB5 93 aa8.57□□□□□ -1.04
CDC42BPB-203ENST00000558867 IGHV6-1A0A0B4J1U7 121 aa8.56□□□□□ -1.04
CDC42BPB-203ENST00000558867 TMEM254Q8TBM7 123 aa8.56□□□□□ -1.04
CDC42BPB-203ENST00000558867 RPL37P61927 97 aaKnown RBP8.52□□□□□ -1.05
CDC42BPB-203ENST00000558867 KLKP1Q107X0 134 aa8.52□□□□□ -1.05
CDC42BPB-203ENST00000558867 C5orf47Q569G3 176 aa8.51□□□□□ -1.05
CDC42BPB-203ENST00000558867 MRPL34Q9BQ48 92 aaKnown RBP8.51□□□□□ -1.05
CDC42BPB-203ENST00000558867 TP53AIP1Q9HCN2 124 aa8.51□□□□□ -1.05
CDC42BPB-203ENST00000558867 KRTAP9-7A8MTY7 169 aa8.49□□□□□ -1.05
CDC42BPB-203ENST00000558867 LINC00313P59037 77 aa8.48□□□□□ -1.05
CDC42BPB-203ENST00000558867 NOTCH2NLQ7Z3S9 236 aa8.48□□□□□ -1.05
CDC42BPB-203ENST00000558867 C20orf197Q8N268 126 aa8.47□□□□□ -1.05
CDC42BPB-203ENST00000558867 FLGP20930 4061 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPB-203ENST00000558867 H3BPC8 53 aa8.46□□□□□ -1.06
CDC42BPB-203ENST00000558867 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPB-203ENST00000558867 Q8N9P0 234 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPB-203ENST00000558867 KRTAP16-1A8MUX0 517 aa8.43□□□□□ -1.06
CDC42BPB-203ENST00000558867 NDUFC1O43677 76 aa8.43□□□□□ -1.06
CDC42BPB-203ENST00000558867 TRAV22A0A0B4J277 110 aa8.41□□□□□ -1.06
CDC42BPB-203ENST00000558867 ZCCHC13Q8WW36 166 aaKnown RBP8.41□□□□□ -1.06
CDC42BPB-203ENST00000558867 MP68P56378 58 aa8.4□□□□□ -1.06
CDC42BPB-203ENST00000558867 CYSTM1Q9H1C7 97 aa8.39□□□□□ -1.07
CDC42BPB-203ENST00000558867 H0Y9P7 68 aa8.37□□□□□ -1.07
CDC42BPB-203ENST00000558867 H7BZZ5 65 aa8.37□□□□□ -1.07
CDC42BPB-203ENST00000558867 TMEM258P61165 79 aa8.37□□□□□ -1.07
CDC42BPB-203ENST00000558867 ATP11AUNQ6ZP68 121 aa8.37□□□□□ -1.07
CDC42BPB-203ENST00000558867 SNURFQ9Y675 71 aa8.37□□□□□ -1.07
CDC42BPB-203ENST00000558867 NDUFS5O43920 106 aa8.35□□□□□ -1.07
CDC42BPB-203ENST00000558867 LINC00208Q96KT6 92 aa8.31□□□□□ -1.08
CDC42BPB-203ENST00000558867 USH2AO75445 5202 aa8.31□□□□□ -1.08
CDC42BPB-203ENST00000558867 C1orf64Q8NEQ6 169 aa8.29□□□□□ -1.08
CDC42BPB-203ENST00000558867 C20orf166-AS1Q96NR2 134 aa8.29□□□□□ -1.08
CDC42BPB-203ENST00000558867 SSPOA2VEC9 5147 aa8.29□□□□□ -1.08
CDC42BPB-203ENST00000558867 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
CDC42BPB-203ENST00000558867 Q75L30 129 aa8.28□□□□□ -1.08
CDC42BPB-203ENST00000558867 A8MUU9 505 aa8.27□□□□□ -1.09
CDC42BPB-203ENST00000558867 LOC101927531A0A1B0GV80 90 aa8.26□□□□□ -1.09
CDC42BPB-203ENST00000558867 Q5W150 140 aa8.26□□□□□ -1.09
CDC42BPB-203ENST00000558867 FAM236DA0A1B0GTK5 79 aa8.23□□□□□ -1.09
CDC42BPB-203ENST00000558867 FAM236CP0DP71 79 aa8.23□□□□□ -1.09
CDC42BPB-203ENST00000558867 SPANXA2-OT1Q8N9U9 137 aa8.22□□□□□ -1.09
CDC42BPB-203ENST00000558867 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms