RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SIGMAR1Q99720 223 aa4.18□□□□□ -1.74
TRAF3-205ENST00000558700 A8MUU9 505 aa4.17□□□□□ -1.74
TRAF3-205ENST00000558700 CEND1Q8N111 149 aa4.17□□□□□ -1.74
TRAF3-205ENST00000558700 PRO1854Q9UHT4 67 aa4.17□□□□□ -1.74
TRAF3-205ENST00000558700 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
TRAF3-205ENST00000558700 DNAL4O96015 105 aa4.16□□□□□ -1.74
TRAF3-205ENST00000558700 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.74
TRAF3-205ENST00000558700 TRBV20-1A0A075B6N2 111 aa4.15□□□□□ -1.75
TRAF3-205ENST00000558700 H3BQ85 93 aa4.15□□□□□ -1.75
TRAF3-205ENST00000558700 FXYD2P54710 66 aa4.15□□□□□ -1.75
TRAF3-205ENST00000558700 DSCR10P59022 87 aa4.15□□□□□ -1.75
TRAF3-205ENST00000558700 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
TRAF3-205ENST00000558700 ORMDL1Q9P0S3 153 aa4.14□□□□□ -1.75
TRAF3-205ENST00000558700 A0A1W2PNM2 257 aa4.13□□□□□ -1.75
TRAF3-205ENST00000558700 PSMB2P49721 201 aa4.13□□□□□ -1.75
TRAF3-205ENST00000558700 HSD52Q0P140 79 aa4.13□□□□□ -1.75
TRAF3-205ENST00000558700 TRBV7-4A0A0J9YYF1 115 aa4.12□□□□□ -1.75
TRAF3-205ENST00000558700 A0A1B0GV72 72 aa4.12□□□□□ -1.75
TRAF3-205ENST00000558700 IGKV4-1P06312 121 aa4.12□□□□□ -1.75
TRAF3-205ENST00000558700 ANKRD29Q8N6D5 301 aa4.12□□□□□ -1.75
TRAF3-205ENST00000558700 TRACP01848 142 aa4.11□□□□□ -1.75
TRAF3-205ENST00000558700 COX6CP09669 75 aa4.11□□□□□ -1.75
TRAF3-205ENST00000558700 LINC00313P59037 77 aa4.11□□□□□ -1.75
TRAF3-205ENST00000558700 FAM236DA0A1B0GTK5 79 aa4.1□□□□□ -1.75
TRAF3-205ENST00000558700 TMEM256-PLSCR3K7ERE1 68 aa4.1□□□□□ -1.75
TRAF3-205ENST00000558700 K7ERJ3 54 aa4.1□□□□□ -1.75
TRAF3-205ENST00000558700 CCKP06307 115 aa4.1□□□□□ -1.75
TRAF3-205ENST00000558700 FAM236CP0DP71 79 aa4.1□□□□□ -1.75
TRAF3-205ENST00000558700 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
TRAF3-205ENST00000558700 IGHV6-1A0A0B4J1U7 121 aa4.07□□□□□ -1.76
TRAF3-205ENST00000558700 PYY3Q5JQD4 70 aa4.07□□□□□ -1.76
TRAF3-205ENST00000558700 LINC00472Q9H8W2 130 aa4.07□□□□□ -1.76
TRAF3-205ENST00000558700 RBM12B-AS1Q9P1G2 102 aa4.07□□□□□ -1.76
TRAF3-205ENST00000558700 C8orf87E5RJ46 101 aa4.06□□□□□ -1.76
TRAF3-205ENST00000558700 VPS25Q9BRG1 176 aa4.06□□□□□ -1.76
TRAF3-205ENST00000558700 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
TRAF3-205ENST00000558700 UQCR10Q9UDW1 63 aa4.06□□□□□ -1.76
TRAF3-205ENST00000558700 A0A1B0GVX0 72 aa4.05□□□□□ -1.76
TRAF3-205ENST00000558700 MT3P25713 68 aa4.05□□□□□ -1.76
TRAF3-205ENST00000558700 DEFB116Q30KQ4 102 aa4.05□□□□□ -1.76
TRAF3-205ENST00000558700 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
TRAF3-205ENST00000558700 HRES1P13985 223 aa4.04□□□□□ -1.76
TRAF3-205ENST00000558700 RBM3P98179 157 aaKnown RBP4.04□□□□□ -1.76
TRAF3-205ENST00000558700 DSCR8Q96T75 97 aa4.04□□□□□ -1.76
TRAF3-205ENST00000558700 J3KT08 172 aa4.03□□□□□ -1.76
TRAF3-205ENST00000558700 SCGB1C2P0DMR2 95 aa4.03□□□□□ -1.76
TRAF3-205ENST00000558700 C9JAW5 83 aa4.01□□□□□ -1.77
TRAF3-205ENST00000558700 MT2AP02795 61 aa4.01□□□□□ -1.77
TRAF3-205ENST00000558700 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
TRAF3-205ENST00000558700 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
TRAF3-205ENST00000558700 NDUFB1O75438 58 aa4□□□□□ -1.77
TRAF3-205ENST00000558700 ZCCHC13Q8WW36 166 aaKnown RBP4□□□□□ -1.77
TRAF3-205ENST00000558700 BAALC-AS2P0C853 105 aa3.99□□□□□ -1.77
TRAF3-205ENST00000558700 LOC105371267A0A1B0GV96 52 aa3.98□□□□□ -1.77
TRAF3-205ENST00000558700 A0A1B0GW54 56 aa3.98□□□□□ -1.77
TRAF3-205ENST00000558700 JMJD7-PLA2G4BH0Y9G9 81 aa3.98□□□□□ -1.77
TRAF3-205ENST00000558700 ATXN8Q156A1 80 aa3.98□□□□□ -1.77
TRAF3-205ENST00000558700 Q6ZQT0 140 aa3.98□□□□□ -1.77
TRAF3-205ENST00000558700 M0R143 59 aa3.97□□□□□ -1.77
TRAF3-205ENST00000558700 MT1FP04733 61 aa3.97□□□□□ -1.77
TRAF3-205ENST00000558700 LOC110117498A0A087WWA1 95 aa3.96□□□□□ -1.78
TRAF3-205ENST00000558700 A8MWP4 228 aa3.96□□□□□ -1.78
TRAF3-205ENST00000558700 SPINK7P58062 85 aa3.96□□□□□ -1.78
TRAF3-205ENST00000558700 KRTAP10-10P60014 251 aa3.96□□□□□ -1.78
TRAF3-205ENST00000558700 LYRM7Q5U5X0 104 aa3.96□□□□□ -1.78
TRAF3-205ENST00000558700 C8orf17Q9NRJ1 99 aa3.96□□□□□ -1.78
TRAF3-205ENST00000558700 PDE6GP18545 87 aa3.95□□□□□ -1.78
TRAF3-205ENST00000558700 USH2AO75445 5202 aa3.94□□□□□ -1.78
TRAF3-205ENST00000558700 WFDC13Q8IUB5 93 aa3.94□□□□□ -1.78
TRAF3-205ENST00000558700 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
TRAF3-205ENST00000558700 NAA38Q9BRA0 125 aaKnown RBP3.93□□□□□ -1.78
TRAF3-205ENST00000558700 C14orf132Q9NPU4 83 aa3.93□□□□□ -1.78
TRAF3-205ENST00000558700 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
TRAF3-205ENST00000558700 SMIM6P0DI80 62 aa3.92□□□□□ -1.78
TRAF3-205ENST00000558700 NREPQ16612 68 aa3.9□□□□□ -1.79
TRAF3-205ENST00000558700 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.79
TRAF3-205ENST00000558700 PRR15Q8IV56 129 aa3.9□□□□□ -1.79
TRAF3-205ENST00000558700 TMEM254Q8TBM7 123 aa3.9□□□□□ -1.79
TRAF3-205ENST00000558700 V9GYY9 64 aa3.9□□□□□ -1.79
TRAF3-205ENST00000558700 MMP24-AS1A0A0U1RRL7 71 aa3.89□□□□□ -1.79
TRAF3-205ENST00000558700 MRPL34Q9BQ48 92 aaKnown RBP3.89□□□□□ -1.79
TRAF3-205ENST00000558700 LINC00846Q9NV44 126 aa3.88□□□□□ -1.79
TRAF3-205ENST00000558700 H3BT86 120 aa3.87□□□□□ -1.79
TRAF3-205ENST00000558700 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
TRAF3-205ENST00000558700 hDV103S1A0JD37 113 aa3.86□□□□□ -1.79
TRAF3-205ENST00000558700 TSTD3H0UI37 97 aa3.86□□□□□ -1.79
TRAF3-205ENST00000558700 K7EQZ3 153 aa3.86□□□□□ -1.79
TRAF3-205ENST00000558700 NDUFS5O43920 106 aa3.86□□□□□ -1.79
TRAF3-205ENST00000558700 BATFQ16520 125 aa3.85□□□□□ -1.79
TRAF3-205ENST00000558700 H1FX-AS1Q4G0G2 97 aa3.84□□□□□ -1.79
TRAF3-205ENST00000558700 C7orf65Q6ZTY9 151 aa3.84□□□□□ -1.79
TRAF3-205ENST00000558700 BPY2O14599 106 aa3.83□□□□□ -1.8
TRAF3-205ENST00000558700 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
TRAF3-205ENST00000558700 A0A1W2PPM0 123 aa3.81□□□□□ -1.8
TRAF3-205ENST00000558700 CASC2Q6XLA1 102 aa3.79□□□□□ -1.8
TRAF3-205ENST00000558700 HCG22E2RYF7 251 aa3.78□□□□□ -1.8
TRAF3-205ENST00000558700 TAX1BP3O14907 124 aa3.78□□□□□ -1.8
TRAF3-205ENST00000558700 Q5W150 140 aa3.78□□□□□ -1.8
TRAF3-205ENST00000558700 Q8N9L7 120 aa3.78□□□□□ -1.8
TRAF3-205ENST00000558700 SPCS1Q9Y6A9 102 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms