RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 RETNLBQ9BQ08 111 aa1.86□□□□□ -2.11
HERC1-203ENST00000558532 SPTBN4Q9H254 2564 aa1.85□□□□□ -2.11
HERC1-203ENST00000558532 ANK3Q12955 4377 aaKnown RBP1.85□□□□□ -2.11
HERC1-203ENST00000558532 UQCR11O14957 56 aa1.85□□□□□ -2.11
HERC1-203ENST00000558532 ACYP2P14621 99 aa1.85□□□□□ -2.11
HERC1-203ENST00000558532 HTN3P15516 51 aa1.85□□□□□ -2.11
HERC1-203ENST00000558532 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
HERC1-203ENST00000558532 GCN1Q92616 2671 aaKnown RBP1.85□□□□□ -2.11
HERC1-203ENST00000558532 LRRK2Q5S007 2527 aa1.85□□□□□ -2.11
HERC1-203ENST00000558532 FBN2P35556 2912 aa1.84□□□□□ -2.11
HERC1-203ENST00000558532 KMT2BQ9UMN6 2715 aaPredicted RBP1.84□□□□□ -2.11
HERC1-203ENST00000558532 DNAH1Q9P2D7 4330 aa1.84□□□□□ -2.11
HERC1-203ENST00000558532 ZFHX2Q9C0A1 2572 aaPredicted RBP1.84□□□□□ -2.11
HERC1-203ENST00000558532 HIVEP2P31629 2446 aa1.84□□□□□ -2.11
HERC1-203ENST00000558532 A0A096LNI7 61 aa1.84□□□□□ -2.11
HERC1-203ENST00000558532 IGHV6-1A0A0B4J1U7 121 aa1.84□□□□□ -2.11
HERC1-203ENST00000558532 ZNF861PO60384 105 aa1.84□□□□□ -2.11
HERC1-203ENST00000558532 MIR22HGQ0VDD5 57 aa1.84□□□□□ -2.11
HERC1-203ENST00000558532 NAV2Q8IVL1 2488 aa1.83□□□□□ -2.12
HERC1-203ENST00000558532 A0A1B0GU69 56 aa1.83□□□□□ -2.12
HERC1-203ENST00000558532 IGLV7-43P04211 117 aa1.83□□□□□ -2.12
HERC1-203ENST00000558532 CASC10Q5T4H9 136 aa1.83□□□□□ -2.12
HERC1-203ENST00000558532 CSAG1Q6PB30 78 aa1.83□□□□□ -2.12
HERC1-203ENST00000558532 CFAP46Q8IYW2 2715 aa1.83□□□□□ -2.12
HERC1-203ENST00000558532 TENM2Q9NT68 2774 aa1.83□□□□□ -2.12
HERC1-203ENST00000558532 HIVEP1P15822 2718 aa1.82□□□□□ -2.12
HERC1-203ENST00000558532 TEX15Q9BXT5 2789 aa1.82□□□□□ -2.12
HERC1-203ENST00000558532 ITPR3Q14573 2671 aa1.82□□□□□ -2.12
HERC1-203ENST00000558532 PANO1I0J062 215 aa1.82□□□□□ -2.12
HERC1-203ENST00000558532 Q5W150 140 aa1.82□□□□□ -2.12
HERC1-203ENST00000558532 NIPBLQ6KC79 2804 aaeCLIP1.81□□□□□ -2.12
HERC1-203ENST00000558532 NBEAL2Q6ZNJ1 2754 aa1.81□□□□□ -2.12
HERC1-203ENST00000558532 A8MUU9 505 aa1.81□□□□□ -2.12
HERC1-203ENST00000558532 ROMO1P60602 79 aa1.81□□□□□ -2.12
HERC1-203ENST00000558532 KRTAP25-1Q3LHN0 102 aa1.81□□□□□ -2.12
HERC1-203ENST00000558532 CHD8Q9HCK8 2581 aa1.81□□□□□ -2.12
HERC1-203ENST00000558532 FLNCQ14315 2725 aa1.81□□□□□ -2.12
HERC1-203ENST00000558532 CSMD2Q7Z408 3487 aa1.81□□□□□ -2.12
HERC1-203ENST00000558532 PKD1L2Q7Z442 2459 aa1.8□□□□□ -2.12
HERC1-203ENST00000558532 POLQO75417 2590 aa1.8□□□□□ -2.12
HERC1-203ENST00000558532 UNC79Q9P2D8 2635 aa1.8□□□□□ -2.12
HERC1-203ENST00000558532 UBR5O95071 2799 aaPredicted RBP1.8□□□□□ -2.12
HERC1-203ENST00000558532 K7EIL1 84 aa1.8□□□□□ -2.12
HERC1-203ENST00000558532 LY6G6CO95867 125 aa1.8□□□□□ -2.12
HERC1-203ENST00000558532 C1orf134Q5TEV5 83 aa1.8□□□□□ -2.12
HERC1-203ENST00000558532 ZNF469Q96JG9 3925 aaPredicted RBP1.8□□□□□ -2.12
HERC1-203ENST00000558532 DNAH3Q8TD57 4116 aa1.8□□□□□ -2.12
HERC1-203ENST00000558532 TRRAPQ9Y4A5 3859 aa1.79□□□□□ -2.12
HERC1-203ENST00000558532 SONP18583 2426 aaKnown RBP1.79□□□□□ -2.12
HERC1-203ENST00000558532 ACACBO00763 2458 aa1.79□□□□□ -2.12
HERC1-203ENST00000558532 ZNF706Q9Y5V0 76 aaPredicted RBP1.79□□□□□ -2.12
HERC1-203ENST00000558532 CCDC168Q8NDH2 2452 aa1.79□□□□□ -2.12
HERC1-203ENST00000558532 PIEZO1Q92508 2521 aa1.79□□□□□ -2.12
HERC1-203ENST00000558532 NF1P21359 2839 aa1.79□□□□□ -2.12
HERC1-203ENST00000558532 OTOGQ6ZRI0 2925 aa1.79□□□□□ -2.12
HERC1-203ENST00000558532 ANK2Q01484 3957 aa1.78□□□□□ -2.12
HERC1-203ENST00000558532 FLNAP21333 2647 aaKnown RBP1.78□□□□□ -2.12
HERC1-203ENST00000558532 ZNF462Q96JM2 2506 aa1.78□□□□□ -2.12
HERC1-203ENST00000558532 F8P00451 2351 aa1.77□□□□□ -2.13
HERC1-203ENST00000558532 H0YAA0 97 aa1.77□□□□□ -2.13
HERC1-203ENST00000558532 LINC00304Q8N9R0 145 aa1.77□□□□□ -2.13
HERC1-203ENST00000558532 SPACA4Q8TDM5 124 aa1.77□□□□□ -2.13
HERC1-203ENST00000558532 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
HERC1-203ENST00000558532 IGSF10Q6WRI0 2623 aa1.77□□□□□ -2.13
HERC1-203ENST00000558532 CACNA1AO00555 2505 aa1.77□□□□□ -2.13
HERC1-203ENST00000558532 MTORP42345 2549 aa1.77□□□□□ -2.13
HERC1-203ENST00000558532 CUBNO60494 3623 aa1.77□□□□□ -2.13
HERC1-203ENST00000558532 ABCA12Q86UK0 2595 aa1.76□□□□□ -2.13
HERC1-203ENST00000558532 VWFP04275 2813 aa1.76□□□□□ -2.13
HERC1-203ENST00000558532 LYSTQ99698 3801 aa1.76□□□□□ -2.13
HERC1-203ENST00000558532 MYO18BQ8IUG5 2567 aa1.76□□□□□ -2.13
HERC1-203ENST00000558532 SETD2Q9BYW2 2564 aaPredicted RBP1.76□□□□□ -2.13
HERC1-203ENST00000558532 TENM3Q9P273 2699 aa1.75□□□□□ -2.13
HERC1-203ENST00000558532 P0C880 135 aa1.75□□□□□ -2.13
HERC1-203ENST00000558532 Q6ZRN7 208 aaPredicted RBP1.75□□□□□ -2.13
HERC1-203ENST00000558532 Q6ZSA8 131 aa1.75□□□□□ -2.13
HERC1-203ENST00000558532 PDZD2O15018 2839 aa1.75□□□□□ -2.13
HERC1-203ENST00000558532 FAM208BQ5VWN6 2430 aa1.75□□□□□ -2.13
HERC1-203ENST00000558532 SSBP3-AS1Q7Z2R9 100 aa1.74□□□□□ -2.13
HERC1-203ENST00000558532 CENPEQ02224 2701 aa1.73□□□□□ -2.13
HERC1-203ENST00000558532 DYNC2H1Q8NCM8 4307 aaKnown RBP1.72□□□□□ -2.13
HERC1-203ENST00000558532 TENM4Q6N022 2769 aa1.72□□□□□ -2.13
HERC1-203ENST00000558532 H1FX-AS1Q4G0G2 97 aa1.72□□□□□ -2.13
HERC1-203ENST00000558532 PSORS1C2Q9UIG4 136 aa1.72□□□□□ -2.13
HERC1-203ENST00000558532 PKD1L1Q8TDX9 2849 aa1.72□□□□□ -2.13
HERC1-203ENST00000558532 BAHCC1Q9P281 2608 aa1.71□□□□□ -2.13
HERC1-203ENST00000558532 SRRM2Q9UQ35 2752 aaKnown RBP1.71□□□□□ -2.14
HERC1-203ENST00000558532 A0A087WTM6 91 aa1.71□□□□□ -2.14
HERC1-203ENST00000558532 NUPR2A6NF83 97 aa1.71□□□□□ -2.14
HERC1-203ENST00000558532 KRTAP10-1P60331 282 aa1.71□□□□□ -2.14
HERC1-203ENST00000558532 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
HERC1-203ENST00000558532 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
HERC1-203ENST00000558532 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
HERC1-203ENST00000558532 APLNQ9ULZ1 77 aa1.71□□□□□ -2.14
HERC1-203ENST00000558532 HECTD1Q9ULT8 2610 aa1.71□□□□□ -2.14
HERC1-203ENST00000558532 ACANP16112 2415 aa1.71□□□□□ -2.14
HERC1-203ENST00000558532 CMYA5Q8N3K9 4069 aa1.71□□□□□ -2.14
HERC1-203ENST00000558532 DNAH7Q8WXX0 4024 aa1.7□□□□□ -2.14
HERC1-203ENST00000558532 TENM1Q9UKZ4 2725 aa1.7□□□□□ -2.14
HERC1-203ENST00000558532 NSD1Q96L73 2696 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms