RNA–Protein interactions for RNA: ENST00000558478.1

AL136295.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL136295.2, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL136295.2-201ENST00000558478 LIMD2Q9BT23 127 aa6□□□□□ -1.45
AL136295.2-201ENST00000558478 CXCL6P80162 114 aa5.99□□□□□ -1.45
AL136295.2-201ENST00000558478 SPAG11AQ6PDA7 123 aa5.99□□□□□ -1.45
AL136295.2-201ENST00000558478 HRCT1Q6UXD1 115 aa5.99□□□□□ -1.45
AL136295.2-201ENST00000558478 BPY2O14599 106 aa5.98□□□□□ -1.45
AL136295.2-201ENST00000558478 SPINK1P00995 79 aa5.98□□□□□ -1.45
AL136295.2-201ENST00000558478 PRR26Q8N8Z3 221 aa5.98□□□□□ -1.45
AL136295.2-201ENST00000558478 SMIM20Q8N5G0 67 aa5.97□□□□□ -1.45
AL136295.2-201ENST00000558478 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
AL136295.2-201ENST00000558478 IMUPQ9GZP8 106 aa5.97□□□□□ -1.45
AL136295.2-201ENST00000558478 ABCA13Q86UQ4 5058 aa5.96□□□□□ -1.45
AL136295.2-201ENST00000558478 J3KT08 172 aa5.96□□□□□ -1.46
AL136295.2-201ENST00000558478 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.46
AL136295.2-201ENST00000558478 PKHD1L1Q86WI1 4243 aa5.96□□□□□ -1.46
AL136295.2-201ENST00000558478 MT-ATP8P03928 68 aa5.95□□□□□ -1.46
AL136295.2-201ENST00000558478 Q5XG85 94 aa5.95□□□□□ -1.46
AL136295.2-201ENST00000558478 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
AL136295.2-201ENST00000558478 ASB16-AS1Q495Z4 193 aa5.94□□□□□ -1.46
AL136295.2-201ENST00000558478 HIST1H4AP62805 103 aaKnown RBP5.92□□□□□ -1.46
AL136295.2-201ENST00000558478 NDUFB1O75438 58 aa5.91□□□□□ -1.46
AL136295.2-201ENST00000558478 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
AL136295.2-201ENST00000558478 LINC00472Q9H8W2 130 aa5.91□□□□□ -1.46
AL136295.2-201ENST00000558478 HERC1Q15751 4861 aa5.89□□□□□ -1.47
AL136295.2-201ENST00000558478 A8MWP4 228 aa5.89□□□□□ -1.47
AL136295.2-201ENST00000558478 OXTP01178 125 aa5.89□□□□□ -1.47
AL136295.2-201ENST00000558478 IGKV4-1P06312 121 aa5.89□□□□□ -1.47
AL136295.2-201ENST00000558478 RPS28P62857 69 aaKnown RBP5.88□□□□□ -1.47
AL136295.2-201ENST00000558478 DEFB116Q30KQ4 102 aa5.87□□□□□ -1.47
AL136295.2-201ENST00000558478 Q96NJ1 140 aa5.87□□□□□ -1.47
AL136295.2-201ENST00000558478 DSCR10P59022 87 aa5.86□□□□□ -1.47
AL136295.2-201ENST00000558478 KRTAP10-8P60410 259 aa5.86□□□□□ -1.47
AL136295.2-201ENST00000558478 K7EQZ3 153 aa5.85□□□□□ -1.47
AL136295.2-201ENST00000558478 C1orf195Q5TG92 126 aa5.84□□□□□ -1.47
AL136295.2-201ENST00000558478 PRR15Q8IV56 129 aa5.84□□□□□ -1.47
AL136295.2-201ENST00000558478 Q8N9L7 120 aa5.84□□□□□ -1.47
AL136295.2-201ENST00000558478 FAM236AA0A1B0GUQ0 79 aa5.83□□□□□ -1.48
AL136295.2-201ENST00000558478 FAM236BA0A1B0GV22 79 aa5.83□□□□□ -1.48
AL136295.2-201ENST00000558478 A0A1B0GVX0 72 aa5.83□□□□□ -1.48
AL136295.2-201ENST00000558478 A0A087WVE0 104 aa5.82□□□□□ -1.48
AL136295.2-201ENST00000558478 KRTAP29-1A8MX34 341 aaPredicted RBP5.81□□□□□ -1.48
AL136295.2-201ENST00000558478 HCG22E2RYF7 251 aa5.81□□□□□ -1.48
AL136295.2-201ENST00000558478 C8orf87E5RJ46 101 aa5.81□□□□□ -1.48
AL136295.2-201ENST00000558478 IGHV6-1A0A0B4J1U7 121 aa5.8□□□□□ -1.48
AL136295.2-201ENST00000558478 ATOX1O00244 68 aa5.8□□□□□ -1.48
AL136295.2-201ENST00000558478 CCDC179H3BU77 68 aa5.79□□□□□ -1.48
AL136295.2-201ENST00000558478 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
AL136295.2-201ENST00000558478 MT1HL1P0DM35 61 aa5.78□□□□□ -1.48
AL136295.2-201ENST00000558478 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
AL136295.2-201ENST00000558478 UBR4Q5T4S7 5183 aa5.77□□□□□ -1.49
AL136295.2-201ENST00000558478 UQCRQO14949 82 aa5.77□□□□□ -1.49
AL136295.2-201ENST00000558478 FP248Q71RG6 208 aaPredicted RBP5.77□□□□□ -1.49
AL136295.2-201ENST00000558478 C8orf17Q9NRJ1 99 aa5.77□□□□□ -1.49
AL136295.2-201ENST00000558478 TNXBP22105 4242 aa5.77□□□□□ -1.49
AL136295.2-201ENST00000558478 hDV103S1A0JD37 113 aa5.76□□□□□ -1.49
AL136295.2-201ENST00000558478 LRP1Q07954 4544 aaKnown RBP5.76□□□□□ -1.49
AL136295.2-201ENST00000558478 FLG2Q5D862 2391 aaPredicted RBP5.75□□□□□ -1.49
AL136295.2-201ENST00000558478 MMP24-AS1A0A0U1RRL7 71 aa5.75□□□□□ -1.49
AL136295.2-201ENST00000558478 LINC00313P59037 77 aa5.75□□□□□ -1.49
AL136295.2-201ENST00000558478 TMEM258P61165 79 aa5.75□□□□□ -1.49
AL136295.2-201ENST00000558478 WFDC13Q8IUB5 93 aa5.75□□□□□ -1.49
AL136295.2-201ENST00000558478 MYCBP2O75592 4640 aa5.74□□□□□ -1.49
AL136295.2-201ENST00000558478 TMEM254Q8TBM7 123 aa5.74□□□□□ -1.49
AL136295.2-201ENST00000558478 RETNLBQ9BQ08 111 aa5.72□□□□□ -1.49
AL136295.2-201ENST00000558478 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
AL136295.2-201ENST00000558478 PRO0628Q9UI54 55 aa5.71□□□□□ -1.5
AL136295.2-201ENST00000558478 TP53AIP1Q9HCN2 124 aa5.7□□□□□ -1.5
AL136295.2-201ENST00000558478 TRAV7A0A075B6U4 112 aa5.69□□□□□ -1.5
AL136295.2-201ENST00000558478 NDUFS5O43920 106 aa5.69□□□□□ -1.5
AL136295.2-201ENST00000558478 SERP2Q8N6R1 65 aa5.69□□□□□ -1.5
AL136295.2-201ENST00000558478 IGLV7-46A0A075B6I9 117 aa5.68□□□□□ -1.5
AL136295.2-201ENST00000558478 COX7CP15954 63 aa5.67□□□□□ -1.5
AL136295.2-201ENST00000558478 PRR4Q16378 134 aa5.66□□□□□ -1.5
AL136295.2-201ENST00000558478 NOTCH2NLQ7Z3S9 236 aa5.66□□□□□ -1.5
AL136295.2-201ENST00000558478 OCR1Q9BZK8 76 aa5.66□□□□□ -1.5
AL136295.2-201ENST00000558478 V9GYY9 64 aa5.66□□□□□ -1.5
AL136295.2-201ENST00000558478 DMBT1Q9UGM3 2413 aaPredicted RBP5.65□□□□□ -1.5
AL136295.2-201ENST00000558478 C9orf92A6NGG3 77 aa5.64□□□□□ -1.51
AL136295.2-201ENST00000558478 SEC61GP60059 68 aa5.64□□□□□ -1.51
AL136295.2-201ENST00000558478 Q8N9P0 234 aaPredicted RBP5.64□□□□□ -1.51
AL136295.2-201ENST00000558478 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
AL136295.2-201ENST00000558478 MP68P56378 58 aa5.63□□□□□ -1.51
AL136295.2-201ENST00000558478 TRAV22A0A0B4J277 110 aa5.62□□□□□ -1.51
AL136295.2-201ENST00000558478 TPRXLQ17RH7 258 aa5.61□□□□□ -1.51
AL136295.2-201ENST00000558478 H3BPC8 53 aa5.6□□□□□ -1.51
AL136295.2-201ENST00000558478 H0Y9P7 68 aa5.59□□□□□ -1.51
AL136295.2-201ENST00000558478 KRTAP13-3Q3SY46 172 aa5.59□□□□□ -1.51
AL136295.2-201ENST00000558478 C20orf166-AS1Q96NR2 134 aa5.59□□□□□ -1.51
AL136295.2-201ENST00000558478 A8MUU9 505 aa5.58□□□□□ -1.52
AL136295.2-201ENST00000558478 Q75L30 129 aa5.58□□□□□ -1.52
AL136295.2-201ENST00000558478 C20orf197Q8N268 126 aa5.57□□□□□ -1.52
AL136295.2-201ENST00000558478 ATP5EP56381 51 aaPredicted RBP5.56□□□□□ -1.52
AL136295.2-201ENST00000558478 KLKP1Q107X0 134 aa5.55□□□□□ -1.52
AL136295.2-201ENST00000558478 SERP1Q9Y6X1 66 aa5.55□□□□□ -1.52
AL136295.2-201ENST00000558478 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
AL136295.2-201ENST00000558478 NDUFC1O43677 76 aa5.54□□□□□ -1.52
AL136295.2-201ENST00000558478 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
AL136295.2-201ENST00000558478 RPL37P61927 97 aaKnown RBP5.53□□□□□ -1.52
AL136295.2-201ENST00000558478 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
AL136295.2-201ENST00000558478 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
AL136295.2-201ENST00000558478 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms