RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 TRIAP1O43715 76 aa8.4□□□□□ -1.06
TSPAN3-204ENST00000558394 WFDC13Q8IUB5 93 aa8.4□□□□□ -1.06
TSPAN3-204ENST00000558394 ANKRD29Q8N6D5 301 aa8.4□□□□□ -1.06
TSPAN3-204ENST00000558394 TRBV7-4A0A0J9YYF1 115 aa8.39□□□□□ -1.07
TSPAN3-204ENST00000558394 FXYD2P54710 66 aa8.39□□□□□ -1.07
TSPAN3-204ENST00000558394 LINC00472Q9H8W2 130 aa8.38□□□□□ -1.07
TSPAN3-204ENST00000558394 A0A1B0GV72 72 aa8.37□□□□□ -1.07
TSPAN3-204ENST00000558394 DNAL4O96015 105 aa8.37□□□□□ -1.07
TSPAN3-204ENST00000558394 ORMDL1Q9P0S3 153 aa8.35□□□□□ -1.07
TSPAN3-204ENST00000558394 A0A1B0GVX0 72 aa8.34□□□□□ -1.07
TSPAN3-204ENST00000558394 A6NN06 94 aa8.34□□□□□ -1.07
TSPAN3-204ENST00000558394 TRACP01848 142 aa8.33□□□□□ -1.08
TSPAN3-204ENST00000558394 H3BQ85 93 aa8.31□□□□□ -1.08
TSPAN3-204ENST00000558394 PSMB2P49721 201 aa8.31□□□□□ -1.08
TSPAN3-204ENST00000558394 LYRM7Q5U5X0 104 aa8.31□□□□□ -1.08
TSPAN3-204ENST00000558394 K7ERJ3 54 aa8.3□□□□□ -1.08
TSPAN3-204ENST00000558394 CCKP06307 115 aa8.3□□□□□ -1.08
TSPAN3-204ENST00000558394 HSD52Q0P140 79 aa8.29□□□□□ -1.08
TSPAN3-204ENST00000558394 TMEM256-PLSCR3K7ERE1 68 aa8.28□□□□□ -1.08
TSPAN3-204ENST00000558394 COX6CP09669 75 aa8.27□□□□□ -1.09
TSPAN3-204ENST00000558394 H1FX-AS1Q4G0G2 97 aa8.25□□□□□ -1.09
TSPAN3-204ENST00000558394 UBE2V1Q13404 147 aa8.22□□□□□ -1.09
TSPAN3-204ENST00000558394 DSCR8Q96T75 97 aa8.22□□□□□ -1.09
TSPAN3-204ENST00000558394 VPS25Q9BRG1 176 aa8.22□□□□□ -1.09
TSPAN3-204ENST00000558394 J3KT08 172 aa8.2□□□□□ -1.1
TSPAN3-204ENST00000558394 PYY3Q5JQD4 70 aa8.2□□□□□ -1.1
TSPAN3-204ENST00000558394 NDUFB1O75438 58 aa8.19□□□□□ -1.1
TSPAN3-204ENST00000558394 KRTAP5-9P26371 169 aa8.16□□□□□ -1.1
TSPAN3-204ENST00000558394 RBM3P98179 157 aaKnown RBP8.16□□□□□ -1.1
TSPAN3-204ENST00000558394 IGKV3D-7A0A0C4DH55 119 aa8.15□□□□□ -1.1
TSPAN3-204ENST00000558394 UQCR10Q9UDW1 63 aa8.15□□□□□ -1.1
TSPAN3-204ENST00000558394 Q5VV11 94 aa8.14□□□□□ -1.11
TSPAN3-204ENST00000558394 SCGB1C2P0DMR2 95 aa8.13□□□□□ -1.11
TSPAN3-204ENST00000558394 KRTAP2-3P0C7H8 128 aa8.12□□□□□ -1.11
TSPAN3-204ENST00000558394 KRTAP2-4Q9BYR9 128 aa8.12□□□□□ -1.11
TSPAN3-204ENST00000558394 FAM236AA0A1B0GUQ0 79 aa8.11□□□□□ -1.11
TSPAN3-204ENST00000558394 FAM236BA0A1B0GV22 79 aa8.11□□□□□ -1.11
TSPAN3-204ENST00000558394 C21orf62-AS1Q17RA5 79 aa8.11□□□□□ -1.11
TSPAN3-204ENST00000558394 MDN1Q9NU22 5596 aa8.1□□□□□ -1.11
TSPAN3-204ENST00000558394 C8orf17Q9NRJ1 99 aa8.1□□□□□ -1.11
TSPAN3-204ENST00000558394 KMT2DO14686 5537 aa8.09□□□□□ -1.11
TSPAN3-204ENST00000558394 C9JAW5 83 aa8.09□□□□□ -1.11
TSPAN3-204ENST00000558394 MT1BP07438 61 aa8.09□□□□□ -1.11
TSPAN3-204ENST00000558394 BAALC-AS2P0C853 105 aa8.06□□□□□ -1.12
TSPAN3-204ENST00000558394 KRTAP10-5P60370 271 aa8.06□□□□□ -1.12
TSPAN3-204ENST00000558394 Q6ZQT0 140 aa8.06□□□□□ -1.12
TSPAN3-204ENST00000558394 Q6ZVQ6 151 aa8.05□□□□□ -1.12
TSPAN3-204ENST00000558394 TMA7Q9Y2S6 64 aaKnown RBP8.01□□□□□ -1.13
TSPAN3-204ENST00000558394 KRTAP19-8Q3LI54 63 aa8□□□□□ -1.13
TSPAN3-204ENST00000558394 JMJD7-PLA2G4BH0Y9G9 81 aa7.99□□□□□ -1.13
TSPAN3-204ENST00000558394 ATXN8Q156A1 80 aa7.99□□□□□ -1.13
TSPAN3-204ENST00000558394 LOC110117498A0A087WWA1 95 aa7.98□□□□□ -1.13
TSPAN3-204ENST00000558394 IGKV2D-30A0A075B6S6 120 aa7.97□□□□□ -1.13
TSPAN3-204ENST00000558394 A0A1B0GW54 56 aa7.97□□□□□ -1.13
TSPAN3-204ENST00000558394 IGKV2-30P06310 120 aa7.97□□□□□ -1.13
TSPAN3-204ENST00000558394 C5orf47Q569G3 176 aa7.97□□□□□ -1.13
TSPAN3-204ENST00000558394 NAA38Q9BRA0 125 aaKnown RBP7.96□□□□□ -1.14
TSPAN3-204ENST00000558394 SPRR2GQ9BYE4 73 aa7.96□□□□□ -1.14
TSPAN3-204ENST00000558394 IMUPQ9GZP8 106 aa7.96□□□□□ -1.14
TSPAN3-204ENST00000558394 NDUFS5O43920 106 aa7.95□□□□□ -1.14
TSPAN3-204ENST00000558394 MRPL34Q9BQ48 92 aaKnown RBP7.95□□□□□ -1.14
TSPAN3-204ENST00000558394 M0R143 59 aa7.94□□□□□ -1.14
TSPAN3-204ENST00000558394 PDE6GP18545 87 aa7.94□□□□□ -1.14
TSPAN3-204ENST00000558394 C7orf65Q6ZTY9 151 aa7.94□□□□□ -1.14
TSPAN3-204ENST00000558394 TMEM254Q8TBM7 123 aa7.93□□□□□ -1.14
TSPAN3-204ENST00000558394 C14orf132Q9NPU4 83 aa7.93□□□□□ -1.14
TSPAN3-204ENST00000558394 PRR15Q8IV56 129 aa7.91□□□□□ -1.14
TSPAN3-204ENST00000558394 MMP24-AS1A0A0U1RRL7 71 aa7.88□□□□□ -1.15
TSPAN3-204ENST00000558394 SPRR2EP22531 72 aa7.88□□□□□ -1.15
TSPAN3-204ENST00000558394 SPRR2BP35325 72 aa7.88□□□□□ -1.15
TSPAN3-204ENST00000558394 SPRR2AP35326 72 aa7.88□□□□□ -1.15
TSPAN3-204ENST00000558394 NREPQ16612 68 aa7.87□□□□□ -1.15
TSPAN3-204ENST00000558394 C4orf26Q17RF5 130 aa7.87□□□□□ -1.15
TSPAN3-204ENST00000558394 hDV103S1A0JD37 113 aa7.86□□□□□ -1.15
TSPAN3-204ENST00000558394 SPRR2FQ96RM1 72 aa7.86□□□□□ -1.15
TSPAN3-204ENST00000558394 CSAG1Q6PB30 78 aa7.85□□□□□ -1.15
TSPAN3-204ENST00000558394 KRTAP2-2Q9BYT5 123 aa7.83□□□□□ -1.16
TSPAN3-204ENST00000558394 KRTAP2-1Q9BYU5 128 aa7.83□□□□□ -1.16
TSPAN3-204ENST00000558394 K7EQZ3 153 aa7.82□□□□□ -1.16
TSPAN3-204ENST00000558394 S4R3F8 94 aa7.82□□□□□ -1.16
TSPAN3-204ENST00000558394 KLKP1Q107X0 134 aa7.8□□□□□ -1.16
TSPAN3-204ENST00000558394 Q5W150 140 aa7.79□□□□□ -1.16
TSPAN3-204ENST00000558394 SMIM6P0DI80 62 aa7.75□□□□□ -1.17
TSPAN3-204ENST00000558394 BATFQ16520 125 aa7.75□□□□□ -1.17
TSPAN3-204ENST00000558394 H3BT86 120 aa7.74□□□□□ -1.17
TSPAN3-204ENST00000558394 BPY2O14599 106 aa7.73□□□□□ -1.17
TSPAN3-204ENST00000558394 LCA10Q71F78 164 aa7.72□□□□□ -1.17
TSPAN3-204ENST00000558394 TSTD3H0UI37 97 aa7.69□□□□□ -1.18
TSPAN3-204ENST00000558394 SMCPP49901 116 aaPredicted RBP7.68□□□□□ -1.18
TSPAN3-204ENST00000558394 Q8N9L7 120 aa7.67□□□□□ -1.18
TSPAN3-204ENST00000558394 CRIPTQ9P021 101 aa7.67□□□□□ -1.18
TSPAN3-204ENST00000558394 C9orf118A6NHY6 69 aa7.66□□□□□ -1.18
TSPAN3-204ENST00000558394 HCG22E2RYF7 251 aa7.66□□□□□ -1.18
TSPAN3-204ENST00000558394 CASC2Q6XLA1 102 aa7.66□□□□□ -1.18
TSPAN3-204ENST00000558394 C1orf64Q8NEQ6 169 aa7.66□□□□□ -1.18
TSPAN3-204ENST00000558394 KRTAP3-1Q9BYR8 98 aa7.66□□□□□ -1.18
TSPAN3-204ENST00000558394 A0A1W2PPM0 123 aa7.65□□□□□ -1.18
TSPAN3-204ENST00000558394 LCE1AQ5T7P2 110 aa7.64□□□□□ -1.19
TSPAN3-204ENST00000558394 KRTAP8-1Q8IUC2 63 aa7.64□□□□□ -1.19
TSPAN3-204ENST00000558394 SPRR2DP22532 72 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms