RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CDK2AP2O75956 126 aa6.19□□□□□ -1.42
TPM1-210ENST00000558264 LINC00336Q6ZUF6 198 aa6.19□□□□□ -1.42
TPM1-210ENST00000558264 SERP1Q9Y6X1 66 aa6.19□□□□□ -1.42
TPM1-210ENST00000558264 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
TPM1-210ENST00000558264 C8orf17Q9NRJ1 99 aa6.19□□□□□ -1.42
TPM1-210ENST00000558264 FAM229AH3BQW9 127 aa6.18□□□□□ -1.42
TPM1-210ENST00000558264 NDUFS5O43920 106 aa6.18□□□□□ -1.42
TPM1-210ENST00000558264 A0A1B0GVX0 72 aa6.18□□□□□ -1.42
TPM1-210ENST00000558264 MP68P56378 58 aa6.18□□□□□ -1.42
TPM1-210ENST00000558264 V9GYY9 64 aa6.16□□□□□ -1.42
TPM1-210ENST00000558264 SMR3BP02814 79 aaPredicted RBP6.16□□□□□ -1.42
TPM1-210ENST00000558264 FAM229BQ4G0N7 80 aa6.15□□□□□ -1.42
TPM1-210ENST00000558264 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
TPM1-210ENST00000558264 KRTAP1-4P0C5Y4 121 aa6.13□□□□□ -1.43
TPM1-210ENST00000558264 SSBP3-AS1Q7Z2R9 100 aa6.13□□□□□ -1.43
TPM1-210ENST00000558264 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
TPM1-210ENST00000558264 C1orf64Q8NEQ6 169 aa6.13□□□□□ -1.43
TPM1-210ENST00000558264 DYNC1H1Q14204 4646 aaKnown RBP6.12□□□□□ -1.43
TPM1-210ENST00000558264 ASB16-AS1Q495Z4 193 aa6.12□□□□□ -1.43
TPM1-210ENST00000558264 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
TPM1-210ENST00000558264 FP248Q71RG6 208 aaPredicted RBP6.11□□□□□ -1.43
TPM1-210ENST00000558264 MRPL34Q9BQ48 92 aaKnown RBP6.11□□□□□ -1.43
TPM1-210ENST00000558264 KMT2CQ8NEZ4 4911 aaKnown RBP6.1□□□□□ -1.43
TPM1-210ENST00000558264 PCOTHQ58A44 107 aa6.1□□□□□ -1.43
TPM1-210ENST00000558264 H3BS24 57 aa6.1□□□□□ -1.43
TPM1-210ENST00000558264 CD164Q04900 197 aa6.09□□□□□ -1.43
TPM1-210ENST00000558264 C1orf195Q5TG92 126 aa6.09□□□□□ -1.43
TPM1-210ENST00000558264 MPLKIPQ8TAP9 179 aa6.09□□□□□ -1.44
TPM1-210ENST00000558264 FAT1Q14517 4588 aa6.08□□□□□ -1.44
TPM1-210ENST00000558264 RYR2Q92736 4967 aa6.07□□□□□ -1.44
TPM1-210ENST00000558264 SMIM26A0A096LP01 95 aa6.06□□□□□ -1.44
TPM1-210ENST00000558264 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
TPM1-210ENST00000558264 TYMSOSQ8TAI1 123 aa6.06□□□□□ -1.44
TPM1-210ENST00000558264 RETNLBQ9BQ08 111 aa6.06□□□□□ -1.44
TPM1-210ENST00000558264 TP53AIP1Q9HCN2 124 aa6.05□□□□□ -1.44
TPM1-210ENST00000558264 Q5W150 140 aa6.05□□□□□ -1.44
TPM1-210ENST00000558264 A0A1B0GVY2 172 aa6.04□□□□□ -1.44
TPM1-210ENST00000558264 H3BPC8 53 aa6.04□□□□□ -1.44
TPM1-210ENST00000558264 APOBP04114 4563 aaKnown RBP6.02□□□□□ -1.45
TPM1-210ENST00000558264 LINC00313P59037 77 aa6.02□□□□□ -1.45
TPM1-210ENST00000558264 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
TPM1-210ENST00000558264 LIMD2Q9BT23 127 aa5.99□□□□□ -1.45
TPM1-210ENST00000558264 BRK1Q8WUW1 75 aa5.99□□□□□ -1.45
TPM1-210ENST00000558264 C8orf87E5RJ46 101 aa5.98□□□□□ -1.45
TPM1-210ENST00000558264 SPANXA2-OT1Q8N9U9 137 aa5.98□□□□□ -1.45
TPM1-210ENST00000558264 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
TPM1-210ENST00000558264 KRTAP13-3Q3SY46 172 aa5.96□□□□□ -1.46
TPM1-210ENST00000558264 IGLV7-46A0A075B6I9 117 aa5.95□□□□□ -1.46
TPM1-210ENST00000558264 SPINK1P00995 79 aa5.95□□□□□ -1.46
TPM1-210ENST00000558264 KRTAP10-4P60372 401 aaPredicted RBP5.95□□□□□ -1.46
TPM1-210ENST00000558264 Q8N9P0 234 aaPredicted RBP5.95□□□□□ -1.46
TPM1-210ENST00000558264 KRTAP16-1A8MUX0 517 aa5.94□□□□□ -1.46
TPM1-210ENST00000558264 COA5Q86WW8 74 aa5.93□□□□□ -1.46
TPM1-210ENST00000558264 RYR3Q15413 4870 aa5.93□□□□□ -1.46
TPM1-210ENST00000558264 PSPHP1O15172 72 aa5.92□□□□□ -1.46
TPM1-210ENST00000558264 LOC101927531A0A1B0GV80 90 aa5.92□□□□□ -1.46
TPM1-210ENST00000558264 PMAIP1Q13794 54 aa5.91□□□□□ -1.46
TPM1-210ENST00000558264 C9orf92A6NGG3 77 aa5.89□□□□□ -1.47
TPM1-210ENST00000558264 IGKV2D-30A0A075B6S6 120 aa5.88□□□□□ -1.47
TPM1-210ENST00000558264 IGKV2-30P06310 120 aa5.88□□□□□ -1.47
TPM1-210ENST00000558264 HRES1P13985 223 aa5.87□□□□□ -1.47
TPM1-210ENST00000558264 Q1T7F1 81 aa5.87□□□□□ -1.47
TPM1-210ENST00000558264 LRP1Q07954 4544 aaKnown RBP5.86□□□□□ -1.47
TPM1-210ENST00000558264 A8MUN3 132 aa5.86□□□□□ -1.47
TPM1-210ENST00000558264 SPAG11AQ6PDA7 123 aa5.85□□□□□ -1.47
TPM1-210ENST00000558264 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
TPM1-210ENST00000558264 HSPG2P98160 4391 aa5.82□□□□□ -1.48
TPM1-210ENST00000558264 RPS29P62273 56 aaKnown RBP5.81□□□□□ -1.48
TPM1-210ENST00000558264 PRR15LQ9BU68 103 aa5.81□□□□□ -1.48
TPM1-210ENST00000558264 Q5VSD8 79 aa5.81□□□□□ -1.48
TPM1-210ENST00000558264 LCE2BO14633 110 aa5.81□□□□□ -1.48
TPM1-210ENST00000558264 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
TPM1-210ENST00000558264 FLG2Q5D862 2391 aaPredicted RBP5.8□□□□□ -1.48
TPM1-210ENST00000558264 KIAA1109Q2LD37 5005 aa5.79□□□□□ -1.48
TPM1-210ENST00000558264 Q8N1X5 172 aa5.79□□□□□ -1.48
TPM1-210ENST00000558264 Q5VV11 94 aa5.78□□□□□ -1.48
TPM1-210ENST00000558264 RYR1P21817 5038 aa5.77□□□□□ -1.49
TPM1-210ENST00000558264 ACYP2P14621 99 aa5.76□□□□□ -1.49
TPM1-210ENST00000558264 DMAC1Q96GE9 116 aa5.76□□□□□ -1.49
TPM1-210ENST00000558264 A8MU10 97 aa5.76□□□□□ -1.49
TPM1-210ENST00000558264 CHKB-CPT1BH3BT56 60 aa5.75□□□□□ -1.49
TPM1-210ENST00000558264 LCE2CQ5TA81 110 aa5.74□□□□□ -1.49
TPM1-210ENST00000558264 DMBT1Q9UGM3 2413 aaPredicted RBP5.74□□□□□ -1.49
TPM1-210ENST00000558264 C7orf65Q6ZTY9 151 aa5.74□□□□□ -1.49
TPM1-210ENST00000558264 TNXBP22105 4242 aa5.74□□□□□ -1.49
TPM1-210ENST00000558264 EPPK1P58107 5090 aaKnown RBP5.73□□□□□ -1.49
TPM1-210ENST00000558264 MYCBP2O75592 4640 aa5.72□□□□□ -1.49
TPM1-210ENST00000558264 RBM12B-AS1Q9P1G2 102 aa5.72□□□□□ -1.49
TPM1-210ENST00000558264 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
TPM1-210ENST00000558264 C20orf166-AS1Q96NR2 134 aa5.71□□□□□ -1.5
TPM1-210ENST00000558264 A8MUU9 505 aa5.7□□□□□ -1.5
TPM1-210ENST00000558264 KRTAP10-8P60410 259 aa5.7□□□□□ -1.5
TPM1-210ENST00000558264 LINC01558Q9Y6Z2 57 aa5.7□□□□□ -1.5
TPM1-210ENST00000558264 A6NED7 52 aa5.68□□□□□ -1.5
TPM1-210ENST00000558264 Q75L30 129 aa5.66□□□□□ -1.5
TPM1-210ENST00000558264 LCE2AQ5TA79 106 aaPredicted RBP5.65□□□□□ -1.5
TPM1-210ENST00000558264 SPINK7P58062 85 aa5.65□□□□□ -1.51
TPM1-210ENST00000558264 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
TPM1-210ENST00000558264 LCA10Q71F78 164 aa5.62□□□□□ -1.51
TPM1-210ENST00000558264 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms