RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 LCA10Q71F78 164 aa2.75□□□□□ -1.97
SPG11-208ENST00000558155 LINC00643Q86TS7 51 aa2.75□□□□□ -1.97
SPG11-208ENST00000558155 ZNF73O43830 326 aaPredicted RBP2.74□□□□□ -1.97
SPG11-208ENST00000558155 HBDP02042 147 aa2.74□□□□□ -1.97
SPG11-208ENST00000558155 RPL37P61927 97 aaKnown RBP2.74□□□□□ -1.97
SPG11-208ENST00000558155 CXCL6P80162 114 aa2.74□□□□□ -1.97
SPG11-208ENST00000558155 Q6ZRX8 168 aa2.74□□□□□ -1.97
SPG11-208ENST00000558155 Q75L30 129 aa2.74□□□□□ -1.97
SPG11-208ENST00000558155 Q9BRP9 147 aa2.74□□□□□ -1.97
SPG11-208ENST00000558155 TRBV10-2A0A0K0K1G8 114 aa2.73□□□□□ -1.97
SPG11-208ENST00000558155 TMEM256-PLSCR3K7ERE1 68 aa2.73□□□□□ -1.97
SPG11-208ENST00000558155 TIMM17BO60830 172 aa2.73□□□□□ -1.97
SPG11-208ENST00000558155 LEPROTL1O95214 131 aa2.73□□□□□ -1.97
SPG11-208ENST00000558155 PCP2Q8IVA1 136 aa2.73□□□□□ -1.97
SPG11-208ENST00000558155 MIR7-3HGQ8N6C7 128 aa2.73□□□□□ -1.97
SPG11-208ENST00000558155 NHP2Q9NX24 153 aaKnown RBP2.73□□□□□ -1.97
SPG11-208ENST00000558155 C11orf86A6NJI1 115 aa2.72□□□□□ -1.97
SPG11-208ENST00000558155 LST1O00453 97 aa2.72□□□□□ -1.97
SPG11-208ENST00000558155 S100A7L2Q5SY68 101 aa2.72□□□□□ -1.97
SPG11-208ENST00000558155 LINC00846Q9NV44 126 aa2.72□□□□□ -1.97
SPG11-208ENST00000558155 LOC107984156A0A0G2JMH3 177 aa2.71□□□□□ -1.98
SPG11-208ENST00000558155 MYMXA0A1B0GTQ4 84 aa2.71□□□□□ -1.98
SPG11-208ENST00000558155 TMEM223A0PJW6 202 aa2.71□□□□□ -1.98
SPG11-208ENST00000558155 A8MUN3 132 aa2.71□□□□□ -1.98
SPG11-208ENST00000558155 PSPHP1O15172 72 aa2.71□□□□□ -1.98
SPG11-208ENST00000558155 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
SPG11-208ENST00000558155 ARL17AQ8IVW1 177 aa2.71□□□□□ -1.98
SPG11-208ENST00000558155 ST20-AS1Q8NBB2 130 aa2.71□□□□□ -1.98
SPG11-208ENST00000558155 IFI27L1Q96BM0 104 aa2.71□□□□□ -1.98
SPG11-208ENST00000558155 H7C2G1 150 aa2.7□□□□□ -1.98
SPG11-208ENST00000558155 K7ERJ3 54 aa2.7□□□□□ -1.98
SPG11-208ENST00000558155 SPRR1BP22528 89 aa2.7□□□□□ -1.98
SPG11-208ENST00000558155 HIST1H4AP62805 103 aaKnown RBP2.7□□□□□ -1.98
SPG11-208ENST00000558155 RBM3P98179 157 aaKnown RBP2.7□□□□□ -1.98
SPG11-208ENST00000558155 C7orf65Q6ZTY9 151 aa2.7□□□□□ -1.98
SPG11-208ENST00000558155 TRAV23DV6A0A075B6W5 121 aa2.69□□□□□ -1.98
SPG11-208ENST00000558155 ATXN8Q156A1 80 aa2.69□□□□□ -1.98
SPG11-208ENST00000558155 C6orf99Q4VX62 202 aa2.69□□□□□ -1.98
SPG11-208ENST00000558155 ATP11AUNQ6ZP68 121 aa2.69□□□□□ -1.98
SPG11-208ENST00000558155 NOTCH2NLQ7Z3S9 236 aa2.69□□□□□ -1.98
SPG11-208ENST00000558155 HIST1H4GQ99525 98 aa2.69□□□□□ -1.98
SPG11-208ENST00000558155 DHRS4-AS1Q9P1J3 65 aa2.69□□□□□ -1.98
SPG11-208ENST00000558155 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
SPG11-208ENST00000558155 A0A096LNJ9 63 aa2.68□□□□□ -1.98
SPG11-208ENST00000558155 A0A0B4J2C4 111 aa2.68□□□□□ -1.98
SPG11-208ENST00000558155 CCKP06307 115 aa2.68□□□□□ -1.98
SPG11-208ENST00000558155 FXYD2P54710 66 aa2.68□□□□□ -1.98
SPG11-208ENST00000558155 TRAV12-1A0A0B4J245 112 aa2.67□□□□□ -1.98
SPG11-208ENST00000558155 SMIM29Q86T20 159 aa2.67□□□□□ -1.98
SPG11-208ENST00000558155 DEFB105AQ8NG35 78 aa2.67□□□□□ -1.98
SPG11-208ENST00000558155 IGHV6-1A0A0B4J1U7 121 aa2.66□□□□□ -1.98
SPG11-208ENST00000558155 TEX49A0A1B0GTD5 131 aa2.66□□□□□ -1.98
SPG11-208ENST00000558155 A0A1B0GW54 56 aa2.66□□□□□ -1.98
SPG11-208ENST00000558155 LINC00313P59037 77 aa2.66□□□□□ -1.98
SPG11-208ENST00000558155 Q1RN00 199 aa2.66□□□□□ -1.98
SPG11-208ENST00000558155 LINC01554Q52M75 96 aa2.66□□□□□ -1.98
SPG11-208ENST00000558155 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
SPG11-208ENST00000558155 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
SPG11-208ENST00000558155 USH2AO75445 5202 aa2.65□□□□□ -1.99
SPG11-208ENST00000558155 TRAV13-2A0A0B4J235 113 aa2.65□□□□□ -1.99
SPG11-208ENST00000558155 LEPROTO15243 131 aa2.65□□□□□ -1.99
SPG11-208ENST00000558155 COX6CP09669 75 aa2.65□□□□□ -1.99
SPG11-208ENST00000558155 ATP5EP2Q5VTU8 51 aa2.65□□□□□ -1.99
SPG11-208ENST00000558155 URB1-AS1Q96HZ7 61 aa2.65□□□□□ -1.99
SPG11-208ENST00000558155 MT2AP02795 61 aa2.64□□□□□ -1.99
SPG11-208ENST00000558155 COX7BP24311 80 aa2.64□□□□□ -1.99
SPG11-208ENST00000558155 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
SPG11-208ENST00000558155 KRTAP10-7P60409 375 aaPredicted RBP2.64□□□□□ -1.99
SPG11-208ENST00000558155 KLKP1Q107X0 134 aa2.64□□□□□ -1.99
SPG11-208ENST00000558155 Q1T7F1 81 aa2.64□□□□□ -1.99
SPG11-208ENST00000558155 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
SPG11-208ENST00000558155 Q6JHZ5 121 aa2.64□□□□□ -1.99
SPG11-208ENST00000558155 MPLKIPQ8TAP9 179 aa2.63□□□□□ -1.99
SPG11-208ENST00000558155 CLEC2BQ92478 149 aa2.63□□□□□ -1.99
SPG11-208ENST00000558155 OBSCN-AS1Q96MR7 158 aa2.63□□□□□ -1.99
SPG11-208ENST00000558155 TRAV7A0A075B6U4 112 aa2.62□□□□□ -1.99
SPG11-208ENST00000558155 A0A0G2JQZ4 141 aa2.62□□□□□ -1.99
SPG11-208ENST00000558155 MT1FP04733 61 aa2.62□□□□□ -1.99
SPG11-208ENST00000558155 ELOF1P60002 83 aaKnown RBP2.62□□□□□ -1.99
SPG11-208ENST00000558155 KRTAP19-6Q3LI70 58 aa2.62□□□□□ -1.99
SPG11-208ENST00000558155 LCE1AQ5T7P2 110 aa2.62□□□□□ -1.99
SPG11-208ENST00000558155 SOSTDC1Q6X4U4 206 aa2.62□□□□□ -1.99
SPG11-208ENST00000558155 PRO1854Q9UHT4 67 aa2.62□□□□□ -1.99
SPG11-208ENST00000558155 SYNE2Q8WXH0 6885 aaKnown RBP2.62□□□□□ -1.99
SPG11-208ENST00000558155 KRTAP23-1A1A580 65 aa2.61□□□□□ -1.99
SPG11-208ENST00000558155 H7BZZ5 65 aa2.61□□□□□ -1.99
SPG11-208ENST00000558155 TSPEAR-AS2P59090 65 aa2.61□□□□□ -1.99
SPG11-208ENST00000558155 ADAMTSL4-AS1Q5T5F5 129 aa2.61□□□□□ -1.99
SPG11-208ENST00000558155 C20orf197Q8N268 126 aa2.61□□□□□ -1.99
SPG11-208ENST00000558155 Q96NJ1 140 aa2.61□□□□□ -1.99
SPG11-208ENST00000558155 CYP4F30PQ9H0H9 118 aa2.61□□□□□ -1.99
SPG11-208ENST00000558155 A0A0J9YXY3 114 aa2.6□□□□□ -1.99
SPG11-208ENST00000558155 PLNP26678 52 aa2.6□□□□□ -1.99
SPG11-208ENST00000558155 IGLV5-48A0A075B6I7 105 aa2.59□□□□□ -1.99
SPG11-208ENST00000558155 A6NN06 94 aa2.59□□□□□ -1.99
SPG11-208ENST00000558155 ZNF815PA8K554 130 aa2.59□□□□□ -1.99
SPG11-208ENST00000558155 F8WEM9 126 aa2.59□□□□□ -1.99
SPG11-208ENST00000558155 LINC00308Q8TCZ7 52 aa2.59□□□□□ -1.99
SPG11-208ENST00000558155 C20orf166-AS1Q96NR2 134 aa2.59□□□□□ -1.99
SPG11-208ENST00000558155 CYSTM1Q9H1C7 97 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms