RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 IGLV7-46A0A075B6I9 117 aa6.97□□□□□ -1.29
TPM1-209ENST00000558072 A0A1B0GVX0 72 aa6.97□□□□□ -1.29
TPM1-209ENST00000558072 LCE2BO14633 110 aa6.97□□□□□ -1.29
TPM1-209ENST00000558072 PRR4Q16378 134 aa6.97□□□□□ -1.29
TPM1-209ENST00000558072 DEFB116Q30KQ4 102 aa6.97□□□□□ -1.29
TPM1-209ENST00000558072 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
TPM1-209ENST00000558072 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
TPM1-209ENST00000558072 IMUPQ9GZP8 106 aa6.96□□□□□ -1.3
TPM1-209ENST00000558072 DSCR10P59022 87 aa6.95□□□□□ -1.3
TPM1-209ENST00000558072 LINC00313P59037 77 aa6.94□□□□□ -1.3
TPM1-209ENST00000558072 IGHV6-1A0A0B4J1U7 121 aa6.93□□□□□ -1.3
TPM1-209ENST00000558072 IGKV3D-7A0A0C4DH55 119 aa6.93□□□□□ -1.3
TPM1-209ENST00000558072 HIST1H4AP62805 103 aaKnown RBP6.92□□□□□ -1.3
TPM1-209ENST00000558072 K7EQZ3 153 aa6.91□□□□□ -1.3
TPM1-209ENST00000558072 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
TPM1-209ENST00000558072 C8orf17Q9NRJ1 99 aa6.89□□□□□ -1.31
TPM1-209ENST00000558072 HMCN2Q8NDA2 5059 aa6.88□□□□□ -1.31
TPM1-209ENST00000558072 HCG22E2RYF7 251 aa6.87□□□□□ -1.31
TPM1-209ENST00000558072 hDV103S1A0JD37 113 aa6.86□□□□□ -1.31
TPM1-209ENST00000558072 TMEM254Q8TBM7 123 aa6.86□□□□□ -1.31
TPM1-209ENST00000558072 KRTAP13-3Q3SY46 172 aa6.85□□□□□ -1.31
TPM1-209ENST00000558072 CASC2Q6XLA1 102 aa6.85□□□□□ -1.31
TPM1-209ENST00000558072 Q8N9L7 120 aa6.85□□□□□ -1.31
TPM1-209ENST00000558072 MT-ATP8P03928 68 aa6.84□□□□□ -1.31
TPM1-209ENST00000558072 MMP24-AS1A0A0U1RRL7 71 aa6.83□□□□□ -1.32
TPM1-209ENST00000558072 MRPL34Q9BQ48 92 aaKnown RBP6.83□□□□□ -1.32
TPM1-209ENST00000558072 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
TPM1-209ENST00000558072 LPAP08519 4548 aa6.82□□□□□ -1.32
TPM1-209ENST00000558072 WFDC13Q8IUB5 93 aa6.8□□□□□ -1.32
TPM1-209ENST00000558072 SCGB1A1P11684 91 aa6.79□□□□□ -1.32
TPM1-209ENST00000558072 Q75L30 129 aa6.79□□□□□ -1.32
TPM1-209ENST00000558072 Q8N9P0 234 aaPredicted RBP6.79□□□□□ -1.32
TPM1-209ENST00000558072 TP53AIP1Q9HCN2 124 aa6.79□□□□□ -1.32
TPM1-209ENST00000558072 NOTCH2NLQ7Z3S9 236 aa6.78□□□□□ -1.32
TPM1-209ENST00000558072 C20orf166-AS1Q96NR2 134 aa6.78□□□□□ -1.32
TPM1-209ENST00000558072 KRTAP16-1A8MUX0 517 aa6.77□□□□□ -1.33
TPM1-209ENST00000558072 XP32Q5T750 250 aa6.77□□□□□ -1.33
TPM1-209ENST00000558072 SMIM20Q8N5G0 67 aa6.77□□□□□ -1.33
TPM1-209ENST00000558072 A0A087WVE0 104 aa6.76□□□□□ -1.33
TPM1-209ENST00000558072 A8MUU9 505 aa6.76□□□□□ -1.33
TPM1-209ENST00000558072 NDUFS5O43920 106 aa6.76□□□□□ -1.33
TPM1-209ENST00000558072 ATP11AUNQ6ZP68 121 aa6.75□□□□□ -1.33
TPM1-209ENST00000558072 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
TPM1-209ENST00000558072 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
TPM1-209ENST00000558072 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
TPM1-209ENST00000558072 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
TPM1-209ENST00000558072 ATOX1O00244 68 aa6.72□□□□□ -1.33
TPM1-209ENST00000558072 UQCRQO14949 82 aa6.71□□□□□ -1.34
TPM1-209ENST00000558072 LRP2P98164 4655 aa6.7□□□□□ -1.34
TPM1-209ENST00000558072 ZCCHC13Q8WW36 166 aaKnown RBP6.68□□□□□ -1.34
TPM1-209ENST00000558072 TRAV7A0A075B6U4 112 aa6.65□□□□□ -1.34
TPM1-209ENST00000558072 C5orf47Q569G3 176 aa6.65□□□□□ -1.34
TPM1-209ENST00000558072 MP68P56378 58 aa6.64□□□□□ -1.35
TPM1-209ENST00000558072 OCR1Q9BZK8 76 aa6.64□□□□□ -1.35
TPM1-209ENST00000558072 TRAV22A0A0B4J277 110 aa6.63□□□□□ -1.35
TPM1-209ENST00000558072 H3BPC8 53 aa6.63□□□□□ -1.35
TPM1-209ENST00000558072 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
TPM1-209ENST00000558072 UBR4Q5T4S7 5183 aa6.6□□□□□ -1.35
TPM1-209ENST00000558072 PCOTHQ58A44 107 aa6.6□□□□□ -1.35
TPM1-209ENST00000558072 SERP2Q8N6R1 65 aa6.6□□□□□ -1.35
TPM1-209ENST00000558072 MUC17Q685J3 4493 aa6.59□□□□□ -1.35
TPM1-209ENST00000558072 LOC101927531A0A1B0GV80 90 aa6.58□□□□□ -1.36
TPM1-209ENST00000558072 H0Y9P7 68 aa6.58□□□□□ -1.36
TPM1-209ENST00000558072 C7orf65Q6ZTY9 151 aa6.56□□□□□ -1.36
TPM1-209ENST00000558072 Q5W150 140 aa6.55□□□□□ -1.36
TPM1-209ENST00000558072 ANAPC13Q9BS18 74 aa6.55□□□□□ -1.36
TPM1-209ENST00000558072 RNF213Q63HN8 5207 aa6.55□□□□□ -1.36
TPM1-209ENST00000558072 KRTAP4-1Q9BYQ7 146 aa6.54□□□□□ -1.36
TPM1-209ENST00000558072 IGKV2-30P06310 120 aa6.52□□□□□ -1.37
TPM1-209ENST00000558072 COX7CP15954 63 aa6.52□□□□□ -1.37
TPM1-209ENST00000558072 C1orf64Q8NEQ6 169 aa6.52□□□□□ -1.37
TPM1-209ENST00000558072 SPINK7P58062 85 aa6.51□□□□□ -1.37
TPM1-209ENST00000558072 LINC00208Q96KT6 92 aa6.51□□□□□ -1.37
TPM1-209ENST00000558072 IGKV2D-30A0A075B6S6 120 aa6.5□□□□□ -1.37
TPM1-209ENST00000558072 CYP4F30PQ9H0H9 118 aa6.48□□□□□ -1.37
TPM1-209ENST00000558072 C20orf197Q8N268 126 aa6.45□□□□□ -1.38
TPM1-209ENST00000558072 RBM12B-AS1Q9P1G2 102 aa6.45□□□□□ -1.38
TPM1-209ENST00000558072 A0A0U1RQV1 116 aa6.44□□□□□ -1.38
TPM1-209ENST00000558072 NDUFC1O43677 76 aa6.44□□□□□ -1.38
TPM1-209ENST00000558072 KLKP1Q107X0 134 aa6.43□□□□□ -1.38
TPM1-209ENST00000558072 HRES1P13985 223 aa6.37□□□□□ -1.39
TPM1-209ENST00000558072 SNURFQ9Y675 71 aa6.37□□□□□ -1.39
TPM1-209ENST00000558072 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
TPM1-209ENST00000558072 FAM236DA0A1B0GTK5 79 aa6.35□□□□□ -1.39
TPM1-209ENST00000558072 A8MUN3 132 aa6.35□□□□□ -1.39
TPM1-209ENST00000558072 FAM236CP0DP71 79 aa6.35□□□□□ -1.39
TPM1-209ENST00000558072 COX6B2Q6YFQ2 88 aa6.34□□□□□ -1.39
TPM1-209ENST00000558072 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
TPM1-209ENST00000558072 MUC2Q02817 5179 aa6.34□□□□□ -1.4
TPM1-209ENST00000558072 MPLKIPQ8TAP9 179 aa6.33□□□□□ -1.4
TPM1-209ENST00000558072 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
TPM1-209ENST00000558072 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
TPM1-209ENST00000558072 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
TPM1-209ENST00000558072 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
TPM1-209ENST00000558072 PCP4P48539 62 aa6.29□□□□□ -1.4
TPM1-209ENST00000558072 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
TPM1-209ENST00000558072 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
TPM1-209ENST00000558072 H1FX-AS1Q4G0G2 97 aa6.27□□□□□ -1.41
TPM1-209ENST00000558072 H7BZZ5 65 aa6.26□□□□□ -1.41
TPM1-209ENST00000558072 ATP5EP56381 51 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms