RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 A0A1B0GVX0 72 aa8.51□□□□□ -1.05
NEDD4-212ENST00000557845 JMJD7-PLA2G4BH0Y9G9 81 aa8.51□□□□□ -1.05
NEDD4-212ENST00000557845 Q6ZQT0 140 aa8.51□□□□□ -1.05
NEDD4-212ENST00000557845 C8orf87E5RJ46 101 aa8.5□□□□□ -1.05
NEDD4-212ENST00000557845 FSIP2Q5CZC0 6907 aa8.5□□□□□ -1.05
NEDD4-212ENST00000557845 J3KT08 172 aa8.49□□□□□ -1.05
NEDD4-212ENST00000557845 CRCT1Q9UGL9 99 aa8.49□□□□□ -1.05
NEDD4-212ENST00000557845 LOC110117498A0A087WWA1 95 aa8.46□□□□□ -1.06
NEDD4-212ENST00000557845 A0A1B0GW54 56 aa8.45□□□□□ -1.06
NEDD4-212ENST00000557845 TSTD3H0UI37 97 aa8.45□□□□□ -1.06
NEDD4-212ENST00000557845 PDE6GP18545 87 aa8.44□□□□□ -1.06
NEDD4-212ENST00000557845 LYRM7Q5U5X0 104 aa8.44□□□□□ -1.06
NEDD4-212ENST00000557845 NDUFB1O75438 58 aa8.43□□□□□ -1.06
NEDD4-212ENST00000557845 BATFQ16520 125 aa8.42□□□□□ -1.06
NEDD4-212ENST00000557845 C14orf132Q9NPU4 83 aa8.42□□□□□ -1.06
NEDD4-212ENST00000557845 HRES1P13985 223 aa8.41□□□□□ -1.06
NEDD4-212ENST00000557845 MPLKIPQ8TAP9 179 aa8.4□□□□□ -1.06
NEDD4-212ENST00000557845 RBM12B-AS1Q9P1G2 102 aa8.4□□□□□ -1.06
NEDD4-212ENST00000557845 FAM236DA0A1B0GTK5 79 aa8.39□□□□□ -1.07
NEDD4-212ENST00000557845 FAM236CP0DP71 79 aa8.39□□□□□ -1.07
NEDD4-212ENST00000557845 LOC105371267A0A1B0GV96 52 aa8.38□□□□□ -1.07
NEDD4-212ENST00000557845 A8MWP4 228 aa8.38□□□□□ -1.07
NEDD4-212ENST00000557845 ZCCHC13Q8WW36 166 aaKnown RBP8.38□□□□□ -1.07
NEDD4-212ENST00000557845 Q8N9P0 234 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-212ENST00000557845 IGKV3D-7A0A0C4DH55 119 aa8.36□□□□□ -1.07
NEDD4-212ENST00000557845 C9orf118A6NHY6 69 aa8.36□□□□□ -1.07
NEDD4-212ENST00000557845 KRTAP9-8Q9BYQ0 159 aa8.36□□□□□ -1.07
NEDD4-212ENST00000557845 C8orf17Q9NRJ1 99 aa8.36□□□□□ -1.07
NEDD4-212ENST00000557845 NREPQ16612 68 aa8.34□□□□□ -1.07
NEDD4-212ENST00000557845 TAX1BP3O14907 124 aa8.33□□□□□ -1.08
NEDD4-212ENST00000557845 SPINK7P58062 85 aa8.32□□□□□ -1.08
NEDD4-212ENST00000557845 A0A1W2PPM0 123 aa8.31□□□□□ -1.08
NEDD4-212ENST00000557845 H3BT86 120 aa8.31□□□□□ -1.08
NEDD4-212ENST00000557845 PRR15Q8IV56 129 aa8.3□□□□□ -1.08
NEDD4-212ENST00000557845 Q6ZVQ6 151 aa8.29□□□□□ -1.08
NEDD4-212ENST00000557845 MTURNQ8N3F0 131 aa8.28□□□□□ -1.08
NEDD4-212ENST00000557845 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
NEDD4-212ENST00000557845 MRPL34Q9BQ48 92 aaKnown RBP8.23□□□□□ -1.09
NEDD4-212ENST00000557845 MT2AP02795 61 aa8.22□□□□□ -1.09
NEDD4-212ENST00000557845 TMEM254Q8TBM7 123 aa8.22□□□□□ -1.09
NEDD4-212ENST00000557845 K7EQZ3 153 aa8.21□□□□□ -1.1
NEDD4-212ENST00000557845 SPCS1Q9Y6A9 102 aa8.2□□□□□ -1.1
NEDD4-212ENST00000557845 hDV103S1A0JD37 113 aa8.19□□□□□ -1.1
NEDD4-212ENST00000557845 BPY2O14599 106 aa8.18□□□□□ -1.1
NEDD4-212ENST00000557845 WFDC13Q8IUB5 93 aa8.17□□□□□ -1.1
NEDD4-212ENST00000557845 MT1FP04733 61 aa8.16□□□□□ -1.1
NEDD4-212ENST00000557845 NDUFS5O43920 106 aa8.15□□□□□ -1.1
NEDD4-212ENST00000557845 SMCPP49901 116 aaPredicted RBP8.15□□□□□ -1.1
NEDD4-212ENST00000557845 USH2AO75445 5202 aa8.14□□□□□ -1.11
NEDD4-212ENST00000557845 KRTAP10-10P60014 251 aa8.13□□□□□ -1.11
NEDD4-212ENST00000557845 COL5A1-AS1Q5SY13 56 aa8.11□□□□□ -1.11
NEDD4-212ENST00000557845 KRTAP9-3Q9BYQ3 159 aa8.09□□□□□ -1.11
NEDD4-212ENST00000557845 Q8N9L7 120 aa8.08□□□□□ -1.12
NEDD4-212ENST00000557845 SSPOA2VEC9 5147 aa8.08□□□□□ -1.12
NEDD4-212ENST00000557845 Q5W150 140 aa8.07□□□□□ -1.12
NEDD4-212ENST00000557845 PRO0461Q9UI25 63 aa8.07□□□□□ -1.12
NEDD4-212ENST00000557845 LCE2BO14633 110 aa8.06□□□□□ -1.12
NEDD4-212ENST00000557845 CASC2Q6XLA1 102 aa8.06□□□□□ -1.12
NEDD4-212ENST00000557845 K7EP34 96 aa8.05□□□□□ -1.12
NEDD4-212ENST00000557845 LINC00846Q9NV44 126 aa8.04□□□□□ -1.12
NEDD4-212ENST00000557845 IGKV2D-30A0A075B6S6 120 aa8.03□□□□□ -1.12
NEDD4-212ENST00000557845 IGKV2-30P06310 120 aa8.03□□□□□ -1.12
NEDD4-212ENST00000557845 HCG22E2RYF7 251 aa8.02□□□□□ -1.13
NEDD4-212ENST00000557845 H1FX-AS1Q4G0G2 97 aa8.02□□□□□ -1.13
NEDD4-212ENST00000557845 UBL5Q9BZL1 73 aa8.02□□□□□ -1.13
NEDD4-212ENST00000557845 C7orf65Q6ZTY9 151 aa8.01□□□□□ -1.13
NEDD4-212ENST00000557845 CXCL6P80162 114 aa7.97□□□□□ -1.13
NEDD4-212ENST00000557845 GTF2H5Q6ZYL4 71 aa7.95□□□□□ -1.14
NEDD4-212ENST00000557845 F8W1H4 67 aa7.92□□□□□ -1.14
NEDD4-212ENST00000557845 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
NEDD4-212ENST00000557845 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.9□□□□□ -1.14
NEDD4-212ENST00000557845 C4orf26Q17RF5 130 aa7.9□□□□□ -1.14
NEDD4-212ENST00000557845 PCP4L1A6NKN8 68 aa7.89□□□□□ -1.15
NEDD4-212ENST00000557845 ETDBQ3ZM63 59 aa7.88□□□□□ -1.15
NEDD4-212ENST00000557845 FCGBPQ9Y6R7 5405 aaPredicted RBP7.86□□□□□ -1.15
NEDD4-212ENST00000557845 TP53AIP1Q9HCN2 124 aa7.82□□□□□ -1.16
NEDD4-212ENST00000557845 KRTAP9-7A8MTY7 169 aa7.8□□□□□ -1.16
NEDD4-212ENST00000557845 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
NEDD4-212ENST00000557845 KRTAP19-6Q3LI70 58 aa7.77□□□□□ -1.17
NEDD4-212ENST00000557845 C1orf64Q8NEQ6 169 aa7.76□□□□□ -1.17
NEDD4-212ENST00000557845 C5orf47Q569G3 176 aa7.75□□□□□ -1.17
NEDD4-212ENST00000557845 ACYP1P07311 99 aa7.72□□□□□ -1.17
NEDD4-212ENST00000557845 S4R3F8 94 aa7.72□□□□□ -1.17
NEDD4-212ENST00000557845 CSAG1Q6PB30 78 aa7.68□□□□□ -1.18
NEDD4-212ENST00000557845 LCA10Q71F78 164 aa7.68□□□□□ -1.18
NEDD4-212ENST00000557845 CYP4F30PQ9H0H9 118 aa7.68□□□□□ -1.18
NEDD4-212ENST00000557845 FAM240AA0A1B0GVK7 77 aa7.65□□□□□ -1.18
NEDD4-212ENST00000557845 FAM236AA0A1B0GUQ0 79 aa7.64□□□□□ -1.19
NEDD4-212ENST00000557845 FAM236BA0A1B0GV22 79 aa7.64□□□□□ -1.19
NEDD4-212ENST00000557845 TRAV22A0A0B4J277 110 aa7.63□□□□□ -1.19
NEDD4-212ENST00000557845 ATP5EP2Q5VTU8 51 aa7.62□□□□□ -1.19
NEDD4-212ENST00000557845 HIST1H4AP62805 103 aaKnown RBP7.61□□□□□ -1.19
NEDD4-212ENST00000557845 LOC101927531A0A1B0GV80 90 aa7.6□□□□□ -1.19
NEDD4-212ENST00000557845 MACF1Q9UPN3 7388 aaKnown RBP7.6□□□□□ -1.19
NEDD4-212ENST00000557845 UQCRQO14949 82 aa7.56□□□□□ -1.2
NEDD4-212ENST00000557845 A0A087WVE0 104 aa7.54□□□□□ -1.2
NEDD4-212ENST00000557845 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
NEDD4-212ENST00000557845 H0Y9P7 68 aa7.52□□□□□ -1.21
NEDD4-212ENST00000557845 LINC00643Q86TS7 51 aa7.52□□□□□ -1.21
NEDD4-212ENST00000557845 SYNE2Q8WXH0 6885 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms