RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 A0A1B0GVX0 72 aa7.37□□□□□ -1.23
SHMT2-234ENST00000557703 C20orf166-AS1Q96NR2 134 aa7.37□□□□□ -1.23
SHMT2-234ENST00000557703 MUC17Q685J3 4493 aa7.36□□□□□ -1.23
SHMT2-234ENST00000557703 DEFB116Q30KQ4 102 aa7.36□□□□□ -1.23
SHMT2-234ENST00000557703 A8MUU9 505 aa7.35□□□□□ -1.23
SHMT2-234ENST00000557703 A8MWP4 228 aa7.35□□□□□ -1.23
SHMT2-234ENST00000557703 ATP11AUNQ6ZP68 121 aa7.35□□□□□ -1.23
SHMT2-234ENST00000557703 IGHV6-1A0A0B4J1U7 121 aa7.34□□□□□ -1.23
SHMT2-234ENST00000557703 ETDBQ3ZM63 59 aa7.33□□□□□ -1.24
SHMT2-234ENST00000557703 PCOTHQ58A44 107 aa7.33□□□□□ -1.24
SHMT2-234ENST00000557703 UBL5Q9BZL1 73 aa7.32□□□□□ -1.24
SHMT2-234ENST00000557703 MUC2Q02817 5179 aa7.32□□□□□ -1.24
SHMT2-234ENST00000557703 DSCR10P59022 87 aa7.31□□□□□ -1.24
SHMT2-234ENST00000557703 PRR15Q8IV56 129 aa7.31□□□□□ -1.24
SHMT2-234ENST00000557703 A0A1B0GV90 55 aa7.3□□□□□ -1.24
SHMT2-234ENST00000557703 BPY2O14599 106 aa7.3□□□□□ -1.24
SHMT2-234ENST00000557703 KRTAP16-1A8MUX0 517 aa7.29□□□□□ -1.24
SHMT2-234ENST00000557703 Q6ZVQ6 151 aa7.29□□□□□ -1.24
SHMT2-234ENST00000557703 IGKV3D-7A0A0C4DH55 119 aa7.27□□□□□ -1.25
SHMT2-234ENST00000557703 ACYP1P07311 99 aa7.27□□□□□ -1.25
SHMT2-234ENST00000557703 NOTCH2NLQ7Z3S9 236 aa7.26□□□□□ -1.25
SHMT2-234ENST00000557703 C8orf17Q9NRJ1 99 aa7.26□□□□□ -1.25
SHMT2-234ENST00000557703 LINC00846Q9NV44 126 aa7.26□□□□□ -1.25
SHMT2-234ENST00000557703 FAM240AA0A1B0GVK7 77 aa7.24□□□□□ -1.25
SHMT2-234ENST00000557703 Q8N9P0 234 aaPredicted RBP7.24□□□□□ -1.25
SHMT2-234ENST00000557703 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
SHMT2-234ENST00000557703 K7EQZ3 153 aa7.2□□□□□ -1.26
SHMT2-234ENST00000557703 CXCL6P80162 114 aa7.2□□□□□ -1.26
SHMT2-234ENST00000557703 TMEM254Q8TBM7 123 aa7.2□□□□□ -1.26
SHMT2-234ENST00000557703 MMP24-AS1A0A0U1RRL7 71 aa7.18□□□□□ -1.26
SHMT2-234ENST00000557703 hDV103S1A0JD37 113 aa7.18□□□□□ -1.26
SHMT2-234ENST00000557703 MRPL34Q9BQ48 92 aaKnown RBP7.17□□□□□ -1.26
SHMT2-234ENST00000557703 ZCCHC13Q8WW36 166 aaKnown RBP7.15□□□□□ -1.26
SHMT2-234ENST00000557703 J3QR89 54 aa7.14□□□□□ -1.27
SHMT2-234ENST00000557703 ATP5EP2Q5VTU8 51 aa7.14□□□□□ -1.27
SHMT2-234ENST00000557703 CASC2Q6XLA1 102 aa7.12□□□□□ -1.27
SHMT2-234ENST00000557703 KRTAP9-2Q9BYQ4 174 aa7.11□□□□□ -1.27
SHMT2-234ENST00000557703 HCG22E2RYF7 251 aa7.1□□□□□ -1.27
SHMT2-234ENST00000557703 Q8N9L7 120 aa7.09□□□□□ -1.27
SHMT2-234ENST00000557703 NDUFS5O43920 106 aa7.07□□□□□ -1.28
SHMT2-234ENST00000557703 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
SHMT2-234ENST00000557703 FAT4Q6V0I7 4981 aa7.07□□□□□ -1.28
SHMT2-234ENST00000557703 KRTAP19-2Q3LHN2 52 aa7.06□□□□□ -1.28
SHMT2-234ENST00000557703 LINC00643Q86TS7 51 aa7.06□□□□□ -1.28
SHMT2-234ENST00000557703 COX6B2Q6YFQ2 88 aa7.05□□□□□ -1.28
SHMT2-234ENST00000557703 WFDC13Q8IUB5 93 aa7.05□□□□□ -1.28
SHMT2-234ENST00000557703 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
SHMT2-234ENST00000557703 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
SHMT2-234ENST00000557703 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
SHMT2-234ENST00000557703 KRTAP9-6A0A140TA67 174 aa7.02□□□□□ -1.29
SHMT2-234ENST00000557703 SPINK7P58062 85 aa7.02□□□□□ -1.29
SHMT2-234ENST00000557703 MPLKIPQ8TAP9 179 aa7□□□□□ -1.29
SHMT2-234ENST00000557703 K7ERU9 68 aa6.99□□□□□ -1.29
SHMT2-234ENST00000557703 HRES1P13985 223 aa6.98□□□□□ -1.29
SHMT2-234ENST00000557703 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
SHMT2-234ENST00000557703 HIST1H4AP62805 103 aaKnown RBP6.95□□□□□ -1.3
SHMT2-234ENST00000557703 MT1HP80294 61 aa6.94□□□□□ -1.3
SHMT2-234ENST00000557703 C7orf65Q6ZTY9 151 aa6.94□□□□□ -1.3
SHMT2-234ENST00000557703 Q5W150 140 aa6.93□□□□□ -1.3
SHMT2-234ENST00000557703 FAM236DA0A1B0GTK5 79 aa6.92□□□□□ -1.3
SHMT2-234ENST00000557703 FAM236CP0DP71 79 aa6.92□□□□□ -1.3
SHMT2-234ENST00000557703 IGKV2D-30A0A075B6S6 120 aa6.87□□□□□ -1.31
SHMT2-234ENST00000557703 M0R2T5 61 aa6.87□□□□□ -1.31
SHMT2-234ENST00000557703 UQCRQO14949 82 aa6.87□□□□□ -1.31
SHMT2-234ENST00000557703 IGKV2-30P06310 120 aa6.87□□□□□ -1.31
SHMT2-234ENST00000557703 IMUPQ9GZP8 106 aa6.87□□□□□ -1.31
SHMT2-234ENST00000557703 TRAV22A0A0B4J277 110 aa6.85□□□□□ -1.31
SHMT2-234ENST00000557703 ATOX1O00244 68 aa6.84□□□□□ -1.31
SHMT2-234ENST00000557703 PCP4P48539 62 aa6.84□□□□□ -1.31
SHMT2-234ENST00000557703 A0A087WVE0 104 aa6.82□□□□□ -1.32
SHMT2-234ENST00000557703 LOC101927531A0A1B0GV80 90 aa6.81□□□□□ -1.32
SHMT2-234ENST00000557703 KRTAP10-6P60371 365 aaPredicted RBP6.78□□□□□ -1.32
SHMT2-234ENST00000557703 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
SHMT2-234ENST00000557703 H1FX-AS1Q4G0G2 97 aa6.77□□□□□ -1.33
SHMT2-234ENST00000557703 CYP4F30PQ9H0H9 118 aa6.77□□□□□ -1.33
SHMT2-234ENST00000557703 SCGB1A1P11684 91 aa6.76□□□□□ -1.33
SHMT2-234ENST00000557703 C5orf47Q569G3 176 aa6.76□□□□□ -1.33
SHMT2-234ENST00000557703 OCR1Q9BZK8 76 aa6.76□□□□□ -1.33
SHMT2-234ENST00000557703 H0Y9P7 68 aa6.74□□□□□ -1.33
SHMT2-234ENST00000557703 MP68P56378 58 aa6.74□□□□□ -1.33
SHMT2-234ENST00000557703 H3BPC8 53 aa6.73□□□□□ -1.33
SHMT2-234ENST00000557703 C4orf26Q17RF5 130 aa6.72□□□□□ -1.33
SHMT2-234ENST00000557703 SMIM20Q8N5G0 67 aa6.72□□□□□ -1.33
SHMT2-234ENST00000557703 MT-ATP8P03928 68 aa6.7□□□□□ -1.34
SHMT2-234ENST00000557703 C1orf64Q8NEQ6 169 aa6.69□□□□□ -1.34
SHMT2-234ENST00000557703 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
SHMT2-234ENST00000557703 LINC00208Q96KT6 92 aa6.66□□□□□ -1.34
SHMT2-234ENST00000557703 FAM236AA0A1B0GUQ0 79 aa6.62□□□□□ -1.35
SHMT2-234ENST00000557703 FAM236BA0A1B0GV22 79 aa6.62□□□□□ -1.35
SHMT2-234ENST00000557703 A8MUN3 132 aa6.62□□□□□ -1.35
SHMT2-234ENST00000557703 KRTAP9-8Q9BYQ0 159 aa6.62□□□□□ -1.35
SHMT2-234ENST00000557703 KRTAP3-1Q9BYR8 98 aa6.62□□□□□ -1.35
SHMT2-234ENST00000557703 TRAV7A0A075B6U4 112 aa6.61□□□□□ -1.35
SHMT2-234ENST00000557703 CRCT1Q9UGL9 99 aa6.61□□□□□ -1.35
SHMT2-234ENST00000557703 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
SHMT2-234ENST00000557703 S4R3F8 94 aa6.58□□□□□ -1.36
SHMT2-234ENST00000557703 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
SHMT2-234ENST00000557703 MT2AP02795 61 aa6.53□□□□□ -1.36
SHMT2-234ENST00000557703 KLKP1Q107X0 134 aa6.53□□□□□ -1.36
SHMT2-234ENST00000557703 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms