RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 SPINK1P00995 79 aa6.15□□□□□ -1.42
TGFB3-207ENST00000557493 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.42
TGFB3-207ENST00000557493 Q5XG85 94 aa6.15□□□□□ -1.42
TGFB3-207ENST00000557493 J3KT08 172 aa6.14□□□□□ -1.43
TGFB3-207ENST00000557493 ASB16-AS1Q495Z4 193 aa6.14□□□□□ -1.43
TGFB3-207ENST00000557493 IMUPQ9GZP8 106 aa6.14□□□□□ -1.43
TGFB3-207ENST00000557493 LINC00472Q9H8W2 130 aa6.12□□□□□ -1.43
TGFB3-207ENST00000557493 MUC2Q02817 5179 aa6.11□□□□□ -1.43
TGFB3-207ENST00000557493 HIST1H4AP62805 103 aaKnown RBP6.1□□□□□ -1.43
TGFB3-207ENST00000557493 Q96NJ1 140 aa6.1□□□□□ -1.43
TGFB3-207ENST00000557493 IGKV4-1P06312 121 aa6.09□□□□□ -1.43
TGFB3-207ENST00000557493 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
TGFB3-207ENST00000557493 LPAP08519 4548 aa6.08□□□□□ -1.44
TGFB3-207ENST00000557493 DSCR10P59022 87 aa6.08□□□□□ -1.44
TGFB3-207ENST00000557493 DEFB116Q30KQ4 102 aa6.08□□□□□ -1.44
TGFB3-207ENST00000557493 A8MWP4 228 aa6.07□□□□□ -1.44
TGFB3-207ENST00000557493 NDUFB1O75438 58 aa6.07□□□□□ -1.44
TGFB3-207ENST00000557493 A0A0U1RQV1 116 aa6.06□□□□□ -1.44
TGFB3-207ENST00000557493 K7EQZ3 153 aa6.06□□□□□ -1.44
TGFB3-207ENST00000557493 SCGB1A1P11684 91 aa6.05□□□□□ -1.44
TGFB3-207ENST00000557493 C1orf195Q5TG92 126 aa6.05□□□□□ -1.44
TGFB3-207ENST00000557493 Q8N9L7 120 aa6.05□□□□□ -1.44
TGFB3-207ENST00000557493 A0A087WVE0 104 aa6.04□□□□□ -1.44
TGFB3-207ENST00000557493 PRR15Q8IV56 129 aa6.04□□□□□ -1.44
TGFB3-207ENST00000557493 FAM236AA0A1B0GUQ0 79 aa6.02□□□□□ -1.45
TGFB3-207ENST00000557493 FAM236BA0A1B0GV22 79 aa6.02□□□□□ -1.45
TGFB3-207ENST00000557493 A0A1B0GVX0 72 aa6.02□□□□□ -1.45
TGFB3-207ENST00000557493 HCG22E2RYF7 251 aa6□□□□□ -1.45
TGFB3-207ENST00000557493 C8orf87E5RJ46 101 aa6□□□□□ -1.45
TGFB3-207ENST00000557493 IGHV6-1A0A0B4J1U7 121 aa5.99□□□□□ -1.45
TGFB3-207ENST00000557493 C8orf17Q9NRJ1 99 aa5.98□□□□□ -1.45
TGFB3-207ENST00000557493 MMP24-AS1A0A0U1RRL7 71 aa5.97□□□□□ -1.45
TGFB3-207ENST00000557493 ATOX1O00244 68 aa5.97□□□□□ -1.45
TGFB3-207ENST00000557493 CASC2Q6XLA1 102 aa5.96□□□□□ -1.46
TGFB3-207ENST00000557493 FP248Q71RG6 208 aaPredicted RBP5.96□□□□□ -1.46
TGFB3-207ENST00000557493 WFDC13Q8IUB5 93 aa5.95□□□□□ -1.46
TGFB3-207ENST00000557493 hDV103S1A0JD37 113 aa5.94□□□□□ -1.46
TGFB3-207ENST00000557493 TMEM254Q8TBM7 123 aa5.94□□□□□ -1.46
TGFB3-207ENST00000557493 RETNLBQ9BQ08 111 aa5.94□□□□□ -1.46
TGFB3-207ENST00000557493 LINC00313P59037 77 aa5.93□□□□□ -1.46
TGFB3-207ENST00000557493 SMIM20Q8N5G0 67 aa5.93□□□□□ -1.46
TGFB3-207ENST00000557493 H3BS24 57 aa5.91□□□□□ -1.46
TGFB3-207ENST00000557493 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
TGFB3-207ENST00000557493 ANAPC13Q9BS18 74 aa5.91□□□□□ -1.46
TGFB3-207ENST00000557493 PCP4P48539 62 aa5.9□□□□□ -1.46
TGFB3-207ENST00000557493 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.47
TGFB3-207ENST00000557493 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
TGFB3-207ENST00000557493 TRAV7A0A075B6U4 112 aa5.88□□□□□ -1.47
TGFB3-207ENST00000557493 IGLV7-46A0A075B6I9 117 aa5.87□□□□□ -1.47
TGFB3-207ENST00000557493 SERP2Q8N6R1 65 aa5.87□□□□□ -1.47
TGFB3-207ENST00000557493 OCR1Q9BZK8 76 aa5.87□□□□□ -1.47
TGFB3-207ENST00000557493 NDUFS5O43920 106 aa5.86□□□□□ -1.47
TGFB3-207ENST00000557493 TP53AIP1Q9HCN2 124 aa5.86□□□□□ -1.47
TGFB3-207ENST00000557493 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
TGFB3-207ENST00000557493 C9orf92A6NGG3 77 aa5.84□□□□□ -1.47
TGFB3-207ENST00000557493 UQCRQO14949 82 aa5.84□□□□□ -1.47
TGFB3-207ENST00000557493 PRR4Q16378 134 aa5.84□□□□□ -1.47
TGFB3-207ENST00000557493 Q8N9P0 234 aaPredicted RBP5.84□□□□□ -1.47
TGFB3-207ENST00000557493 COX7CP15954 63 aa5.83□□□□□ -1.48
TGFB3-207ENST00000557493 CRCT1Q9UGL9 99 aa5.83□□□□□ -1.48
TGFB3-207ENST00000557493 KRTAP13-3Q3SY46 172 aa5.81□□□□□ -1.48
TGFB3-207ENST00000557493 TRAV22A0A0B4J277 110 aa5.79□□□□□ -1.48
TGFB3-207ENST00000557493 MP68P56378 58 aa5.79□□□□□ -1.48
TGFB3-207ENST00000557493 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
TGFB3-207ENST00000557493 C5orf47Q569G3 176 aa5.79□□□□□ -1.48
TGFB3-207ENST00000557493 C20orf166-AS1Q96NR2 134 aa5.79□□□□□ -1.48
TGFB3-207ENST00000557493 A8MUU9 505 aa5.78□□□□□ -1.48
TGFB3-207ENST00000557493 H0Y9P7 68 aa5.77□□□□□ -1.49
TGFB3-207ENST00000557493 H3BPC8 53 aa5.76□□□□□ -1.49
TGFB3-207ENST00000557493 Q75L30 129 aa5.76□□□□□ -1.49
TGFB3-207ENST00000557493 MUC17Q685J3 4493 aa5.76□□□□□ -1.49
TGFB3-207ENST00000557493 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
TGFB3-207ENST00000557493 CCDC179H3BU77 68 aa5.74□□□□□ -1.49
TGFB3-207ENST00000557493 XP32Q5T750 250 aa5.74□□□□□ -1.49
TGFB3-207ENST00000557493 ZCCHC13Q8WW36 166 aaKnown RBP5.73□□□□□ -1.49
TGFB3-207ENST00000557493 RPL37P61927 97 aaKnown RBP5.72□□□□□ -1.49
TGFB3-207ENST00000557493 KLKP1Q107X0 134 aa5.72□□□□□ -1.49
TGFB3-207ENST00000557493 LOC101927531A0A1B0GV80 90 aa5.71□□□□□ -1.5
TGFB3-207ENST00000557493 Q5W150 140 aa5.71□□□□□ -1.5
TGFB3-207ENST00000557493 LINC00208Q96KT6 92 aa5.71□□□□□ -1.5
TGFB3-207ENST00000557493 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
TGFB3-207ENST00000557493 NDUFC1O43677 76 aa5.69□□□□□ -1.5
TGFB3-207ENST00000557493 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
TGFB3-207ENST00000557493 SNURFQ9Y675 71 aa5.69□□□□□ -1.5
TGFB3-207ENST00000557493 IGKV2-30P06310 120 aa5.66□□□□□ -1.5
TGFB3-207ENST00000557493 C7orf65Q6ZTY9 151 aa5.65□□□□□ -1.5
TGFB3-207ENST00000557493 IGKV2D-30A0A075B6S6 120 aa5.63□□□□□ -1.51
TGFB3-207ENST00000557493 CYP4F30PQ9H0H9 118 aa5.62□□□□□ -1.51
TGFB3-207ENST00000557493 CYSTM1Q9H1C7 97 aa5.62□□□□□ -1.51
TGFB3-207ENST00000557493 H7BZZ5 65 aa5.61□□□□□ -1.51
TGFB3-207ENST00000557493 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
TGFB3-207ENST00000557493 TMEM258P61165 79 aa5.6□□□□□ -1.51
TGFB3-207ENST00000557493 PCOTHQ58A44 107 aa5.59□□□□□ -1.51
TGFB3-207ENST00000557493 ATP5EP56381 51 aaPredicted RBP5.57□□□□□ -1.52
TGFB3-207ENST00000557493 SPINK7P58062 85 aa5.57□□□□□ -1.52
TGFB3-207ENST00000557493 SPANXA2-OT1Q8N9U9 137 aa5.56□□□□□ -1.52
TGFB3-207ENST00000557493 FAM236DA0A1B0GTK5 79 aa5.55□□□□□ -1.52
TGFB3-207ENST00000557493 FAM236CP0DP71 79 aa5.55□□□□□ -1.52
TGFB3-207ENST00000557493 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
TGFB3-207ENST00000557493 HRES1P13985 223 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms