RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 KRTAP11-1Q8IUC1 163 aa3.58□□□□□ -1.84
FOXN3-215ENST00000557261 DPH3Q96FX2 82 aa3.58□□□□□ -1.84
FOXN3-215ENST00000557261 PSORS1C2Q9UIG4 136 aa3.58□□□□□ -1.84
FOXN3-215ENST00000557261 APOBP04114 4563 aaKnown RBP3.57□□□□□ -1.84
FOXN3-215ENST00000557261 RPL37AP61513 92 aaKnown RBP3.57□□□□□ -1.84
FOXN3-215ENST00000557261 LINC00483Q53H64 154 aa3.57□□□□□ -1.84
FOXN3-215ENST00000557261 VPS13BQ7Z7G8 4022 aa3.57□□□□□ -1.84
FOXN3-215ENST00000557261 DSCR8Q96T75 97 aa3.57□□□□□ -1.84
FOXN3-215ENST00000557261 LAMTOR3Q9UHA4 124 aa3.57□□□□□ -1.84
FOXN3-215ENST00000557261 ERC2-IT1O76042 136 aa3.56□□□□□ -1.84
FOXN3-215ENST00000557261 CCKP06307 115 aa3.56□□□□□ -1.84
FOXN3-215ENST00000557261 Q6ZQT0 140 aa3.56□□□□□ -1.84
FOXN3-215ENST00000557261 HIGD2AQ9BW72 106 aa3.56□□□□□ -1.84
FOXN3-215ENST00000557261 C14orf132Q9NPU4 83 aa3.56□□□□□ -1.84
FOXN3-215ENST00000557261 IGLV7-43P04211 117 aa3.55□□□□□ -1.84
FOXN3-215ENST00000557261 FUSP35637 526 aaKnown RBP eCLIP3.55□□□□□ -1.84
FOXN3-215ENST00000557261 C1orf137Q5JT78 98 aa3.55□□□□□ -1.84
FOXN3-215ENST00000557261 Q6JHZ5 121 aa3.55□□□□□ -1.84
FOXN3-215ENST00000557261 UBR4Q5T4S7 5183 aa3.54□□□□□ -1.84
FOXN3-215ENST00000557261 F8WEM9 126 aa3.54□□□□□ -1.84
FOXN3-215ENST00000557261 Q5W150 140 aa3.54□□□□□ -1.84
FOXN3-215ENST00000557261 ADM2Q7Z4H4 148 aa3.54□□□□□ -1.84
FOXN3-215ENST00000557261 ST20-AS1Q8NBB2 130 aa3.54□□□□□ -1.84
FOXN3-215ENST00000557261 SPRR4Q96PI1 79 aa3.54□□□□□ -1.84
FOXN3-215ENST00000557261 ATP5EP2Q5VTU8 51 aa3.53□□□□□ -1.84
FOXN3-215ENST00000557261 Q6Q795 121 aa3.53□□□□□ -1.84
FOXN3-215ENST00000557261 FAM229BQ4G0N7 80 aa3.52□□□□□ -1.85
FOXN3-215ENST00000557261 LINC00643Q86TS7 51 aa3.52□□□□□ -1.85
FOXN3-215ENST00000557261 VPS25Q9BRG1 176 aa3.52□□□□□ -1.85
FOXN3-215ENST00000557261 TRBV7-7A0A0K0K1E9 115 aa3.51□□□□□ -1.85
FOXN3-215ENST00000557261 CRYGAP11844 174 aa3.51□□□□□ -1.85
FOXN3-215ENST00000557261 DEFB105AQ8NG35 78 aa3.51□□□□□ -1.85
FOXN3-215ENST00000557261 IMUPQ9GZP8 106 aa3.51□□□□□ -1.85
FOXN3-215ENST00000557261 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
FOXN3-215ENST00000557261 LINC00313P59037 77 aa3.5□□□□□ -1.85
FOXN3-215ENST00000557261 C3orf22Q8N5N4 141 aa3.5□□□□□ -1.85
FOXN3-215ENST00000557261 UBL5Q9BZL1 73 aa3.5□□□□□ -1.85
FOXN3-215ENST00000557261 LINC00846Q9NV44 126 aa3.5□□□□□ -1.85
FOXN3-215ENST00000557261 FAT1Q14517 4588 aa3.49□□□□□ -1.85
FOXN3-215ENST00000557261 IGFL1Q6UW32 110 aa3.49□□□□□ -1.85
FOXN3-215ENST00000557261 SPINK6Q6UWN8 80 aa3.49□□□□□ -1.85
FOXN3-215ENST00000557261 SIGMAR1Q99720 223 aa3.49□□□□□ -1.85
FOXN3-215ENST00000557261 A0A1W2PNM2 257 aa3.48□□□□□ -1.85
FOXN3-215ENST00000557261 SCGB1A1P11684 91 aa3.48□□□□□ -1.85
FOXN3-215ENST00000557261 A0A1B0GV72 72 aa3.47□□□□□ -1.85
FOXN3-215ENST00000557261 KRTAP10-4P60372 401 aaPredicted RBP3.47□□□□□ -1.85
FOXN3-215ENST00000557261 SSBP3-AS1Q7Z2R9 100 aa3.47□□□□□ -1.85
FOXN3-215ENST00000557261 SRRM2Q9UQ35 2752 aaKnown RBP3.47□□□□□ -1.85
FOXN3-215ENST00000557261 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
FOXN3-215ENST00000557261 SS18L2Q9UHA2 77 aa3.46□□□□□ -1.86
FOXN3-215ENST00000557261 DMBT1Q9UGM3 2413 aaPredicted RBP3.46□□□□□ -1.86
FOXN3-215ENST00000557261 MYCBP2O75592 4640 aa3.46□□□□□ -1.86
FOXN3-215ENST00000557261 MT-ATP8P03928 68 aa3.45□□□□□ -1.86
FOXN3-215ENST00000557261 C9orf153Q5TBE3 101 aa3.45□□□□□ -1.86
FOXN3-215ENST00000557261 Q5XG85 94 aa3.45□□□□□ -1.86
FOXN3-215ENST00000557261 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
FOXN3-215ENST00000557261 RPS29P62273 56 aaKnown RBP3.44□□□□□ -1.86
FOXN3-215ENST00000557261 HAMPP81172 84 aa3.44□□□□□ -1.86
FOXN3-215ENST00000557261 MOBPQ13875 183 aa3.44□□□□□ -1.86
FOXN3-215ENST00000557261 NREPQ16612 68 aa3.44□□□□□ -1.86
FOXN3-215ENST00000557261 ASB16-AS1Q495Z4 193 aa3.44□□□□□ -1.86
FOXN3-215ENST00000557261 A0A087WSZ3 146 aa3.43□□□□□ -1.86
FOXN3-215ENST00000557261 A8MWP4 228 aa3.43□□□□□ -1.86
FOXN3-215ENST00000557261 J3KT08 172 aa3.43□□□□□ -1.86
FOXN3-215ENST00000557261 HIST1H4AP62805 103 aaKnown RBP3.42□□□□□ -1.86
FOXN3-215ENST00000557261 SPANXA2-OT1Q8N9U9 137 aa3.42□□□□□ -1.86
FOXN3-215ENST00000557261 A6NED7 52 aa3.41□□□□□ -1.86
FOXN3-215ENST00000557261 KRTAP13-2Q52LG2 175 aa3.41□□□□□ -1.86
FOXN3-215ENST00000557261 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
FOXN3-215ENST00000557261 LINC00472Q9H8W2 130 aa3.41□□□□□ -1.86
FOXN3-215ENST00000557261 A8MUU9 505 aa3.4□□□□□ -1.87
FOXN3-215ENST00000557261 SPINK1P00995 79 aa3.4□□□□□ -1.87
FOXN3-215ENST00000557261 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
FOXN3-215ENST00000557261 Q5VSD8 79 aa3.4□□□□□ -1.87
FOXN3-215ENST00000557261 SPAG11AQ6PDA7 123 aa3.4□□□□□ -1.87
FOXN3-215ENST00000557261 LIMD2Q9BT23 127 aa3.4□□□□□ -1.87
FOXN3-215ENST00000557261 IGKV3D-7A0A0C4DH55 119 aa3.39□□□□□ -1.87
FOXN3-215ENST00000557261 SMR3BP02814 79 aaPredicted RBP3.39□□□□□ -1.87
FOXN3-215ENST00000557261 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
FOXN3-215ENST00000557261 Q96NJ1 140 aa3.39□□□□□ -1.87
FOXN3-215ENST00000557261 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
FOXN3-215ENST00000557261 TNXBP22105 4242 aa3.39□□□□□ -1.87
FOXN3-215ENST00000557261 FLG2Q5D862 2391 aaPredicted RBP3.38□□□□□ -1.87
FOXN3-215ENST00000557261 FAM236DA0A1B0GTK5 79 aa3.38□□□□□ -1.87
FOXN3-215ENST00000557261 K7ERS5 55 aa3.38□□□□□ -1.87
FOXN3-215ENST00000557261 ATOX1O00244 68 aa3.38□□□□□ -1.87
FOXN3-215ENST00000557261 IGKV4-1P06312 121 aa3.38□□□□□ -1.87
FOXN3-215ENST00000557261 FAM236CP0DP71 79 aa3.38□□□□□ -1.87
FOXN3-215ENST00000557261 A0A0G2JQZ4 141 aa3.37□□□□□ -1.87
FOXN3-215ENST00000557261 FAM236AA0A1B0GUQ0 79 aa3.37□□□□□ -1.87
FOXN3-215ENST00000557261 FAM236BA0A1B0GV22 79 aa3.37□□□□□ -1.87
FOXN3-215ENST00000557261 SMIM20Q8N5G0 67 aa3.37□□□□□ -1.87
FOXN3-215ENST00000557261 FAT3Q8TDW7 4589 aa3.36□□□□□ -1.87
FOXN3-215ENST00000557261 PRR15Q8IV56 129 aa3.36□□□□□ -1.87
FOXN3-215ENST00000557261 LINC00304Q8N9R0 145 aa3.36□□□□□ -1.87
FOXN3-215ENST00000557261 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
FOXN3-215ENST00000557261 K7EQZ3 153 aa3.35□□□□□ -1.87
FOXN3-215ENST00000557261 NDUFB1O75438 58 aa3.35□□□□□ -1.87
FOXN3-215ENST00000557261 A0A087WVE0 104 aa3.34□□□□□ -1.87
FOXN3-215ENST00000557261 HCG22E2RYF7 251 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms