RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 MYH4Q9Y623 1939 aa-4.54□□□□□ -3.14
LINC00648-203ENST00000556923 CLASP1Q7Z460 1538 aa-4.54□□□□□ -3.14
LINC00648-203ENST00000556923 TMEM262E9PQX1 116 aa-4.54□□□□□ -3.14
LINC00648-203ENST00000556923 GAFA1Q96PS6 74 aa-4.54□□□□□ -3.14
LINC00648-203ENST00000556923 CGREF1Q99674 301 aa-4.54□□□□□ -3.14
LINC00648-203ENST00000556923 MAP3K4Q9Y6R4 1608 aa-4.54□□□□□ -3.14
LINC00648-203ENST00000556923 TJP1Q07157 1748 aa-4.55□□□□□ -3.14
LINC00648-203ENST00000556923 NEXMIFQ5QGS0 1516 aa-4.55□□□□□ -3.14
LINC00648-203ENST00000556923 TRAV21A0A0B4J279 112 aa-4.55□□□□□ -3.14
LINC00648-203ENST00000556923 KIF14Q15058 1648 aa-4.55□□□□□ -3.14
LINC00648-203ENST00000556923 PREX2Q70Z35 1606 aa-4.56□□□□□ -3.14
LINC00648-203ENST00000556923 CCDC58Q4VC31 144 aa-4.56□□□□□ -3.14
LINC00648-203ENST00000556923 C1orf54Q8WWF1 131 aa-4.56□□□□□ -3.14
LINC00648-203ENST00000556923 BAZ1AQ9NRL2 1556 aaPredicted RBP-4.57□□□□□ -3.14
LINC00648-203ENST00000556923 MINOS1Q5TGZ0 78 aa-4.57□□□□□ -3.14
LINC00648-203ENST00000556923 CHD1O14646 1710 aa-4.58□□□□□ -3.14
LINC00648-203ENST00000556923 ANKRD36BQ8N2N9 1353 aa-4.58□□□□□ -3.14
LINC00648-203ENST00000556923 NDUFA2O43678 99 aa-4.59□□□□□ -3.14
LINC00648-203ENST00000556923 FCER1GP30273 86 aa-4.59□□□□□ -3.14
LINC00648-203ENST00000556923 XIRP2A4UGR9 3374 aa-4.6□□□□□ -3.15
LINC00648-203ENST00000556923 TMEM218A2RU14 115 aa-4.61□□□□□ -3.15
LINC00648-203ENST00000556923 ARHGAP5Q13017 1502 aa-4.62□□□□□ -3.15
LINC00648-203ENST00000556923 LTN1O94822 1766 aa-4.63□□□□□ -3.15
LINC00648-203ENST00000556923 RICTORQ6R327 1708 aa-4.63□□□□□ -3.15
LINC00648-203ENST00000556923 IQCF6A8MYZ5 107 aa-4.64□□□□□ -3.15
LINC00648-203ENST00000556923 C6orf48Q9UBA6 75 aa-4.64□□□□□ -3.15
LINC00648-203ENST00000556923 MYOM2P54296 1465 aa-4.64□□□□□ -3.15
LINC00648-203ENST00000556923 FAM208AQ9UK61 1670 aaKnown RBP-4.64□□□□□ -3.15
LINC00648-203ENST00000556923 CCNB3Q8WWL7 1395 aa-4.65□□□□□ -3.15
LINC00648-203ENST00000556923 SNAPC5O75971 98 aa-4.65□□□□□ -3.15
LINC00648-203ENST00000556923 KRTDAPP60985 99 aa-4.65□□□□□ -3.15
LINC00648-203ENST00000556923 CC2D2AQ9P2K1 1620 aa-4.66□□□□□ -3.16
LINC00648-203ENST00000556923 UACAQ9BZF9 1416 aa-4.66□□□□□ -3.16
LINC00648-203ENST00000556923 NRAPQ86VF7 1730 aa-4.66□□□□□ -3.16
LINC00648-203ENST00000556923 TRBV25-1A0A075B6N4 114 aa-4.67□□□□□ -3.16
LINC00648-203ENST00000556923 SVBPQ8N300 66 aa-4.67□□□□□ -3.16
LINC00648-203ENST00000556923 C20orf78Q9BR46 151 aa-4.67□□□□□ -3.16
LINC00648-203ENST00000556923 ABCA3Q99758 1704 aa-4.67□□□□□ -3.16
LINC00648-203ENST00000556923 ANKRD26Q9UPS8 1709 aa-4.68□□□□□ -3.16
LINC00648-203ENST00000556923 CACFD1Q9UGQ2 172 aa-4.68□□□□□ -3.16
LINC00648-203ENST00000556923 H3BQ15 152 aa-4.69□□□□□ -3.16
LINC00648-203ENST00000556923 HMGA1P17096 107 aaKnown RBP-4.69□□□□□ -3.16
LINC00648-203ENST00000556923 DEFB131BA0A096LNP1 70 aa-4.7□□□□□ -3.16
LINC00648-203ENST00000556923 POLR2KP53803 58 aaKnown RBP-4.7□□□□□ -3.16
LINC00648-203ENST00000556923 ACBD7Q8N6N7 88 aa-4.7□□□□□ -3.16
LINC00648-203ENST00000556923 IER3IP1Q9Y5U9 82 aa-4.7□□□□□ -3.16
LINC00648-203ENST00000556923 hADV29S1A0JD25 119 aa-4.71□□□□□ -3.16
LINC00648-203ENST00000556923 D6R8Y8 96 aa-4.71□□□□□ -3.16
LINC00648-203ENST00000556923 CRIP1P50238 77 aa-4.71□□□□□ -3.16
LINC00648-203ENST00000556923 PMCHL1Q16048 86 aa-4.71□□□□□ -3.16
LINC00648-203ENST00000556923 MUSTN1Q8IVN3 82 aa-4.71□□□□□ -3.16
LINC00648-203ENST00000556923 NRXN1Q9ULB1 1477 aa-4.71□□□□□ -3.16
LINC00648-203ENST00000556923 DIP2BQ9P265 1576 aa-4.71□□□□□ -3.16
LINC00648-203ENST00000556923 NHSQ6T4R5 1651 aa-4.72□□□□□ -3.16
LINC00648-203ENST00000556923 UTRNP46939 3433 aa-4.72□□□□□ -3.17
LINC00648-203ENST00000556923 ABCC2Q92887 1545 aa-4.73□□□□□ -3.17
LINC00648-203ENST00000556923 S100A8P05109 93 aa-4.74□□□□□ -3.17
LINC00648-203ENST00000556923 KAAG1Q9UBP8 84 aa-4.74□□□□□ -3.17
LINC00648-203ENST00000556923 A0A1B0GUT8 65 aa-4.75□□□□□ -3.17
LINC00648-203ENST00000556923 ALKAL2Q6UX46 152 aa-4.75□□□□□ -3.17
LINC00648-203ENST00000556923 NRKQ7Z2Y5 1582 aa-4.75□□□□□ -3.17
LINC00648-203ENST00000556923 NALCNQ8IZF0 1738 aa-4.77□□□□□ -3.17
LINC00648-203ENST00000556923 ROCK2O75116 1388 aaKnown RBP-4.78□□□□□ -3.17
LINC00648-203ENST00000556923 NDUFA4O00483 81 aa-4.78□□□□□ -3.17
LINC00648-203ENST00000556923 FAM107BQ9H098 131 aa-4.78□□□□□ -3.17
LINC00648-203ENST00000556923 MRPL33O75394 65 aaKnown RBP-4.79□□□□□ -3.18
LINC00648-203ENST00000556923 HMGN3Q15651 99 aa-4.79□□□□□ -3.18
LINC00648-203ENST00000556923 MYO5CQ9NQX4 1742 aa-4.8□□□□□ -3.18
LINC00648-203ENST00000556923 INO80Q9ULG1 1556 aaPredicted RBP-4.8□□□□□ -3.18
LINC00648-203ENST00000556923 RNF17Q9BXT8 1623 aaKnown RBP-4.8□□□□□ -3.18
LINC00648-203ENST00000556923 MPC2O95563 127 aa-4.81□□□□□ -3.18
LINC00648-203ENST00000556923 CCDC88BA6NC98 1476 aa-4.81□□□□□ -3.18
LINC00648-203ENST00000556923 ARFGEF2Q9Y6D5 1785 aa-4.82□□□□□ -3.18
LINC00648-203ENST00000556923 DEFB133Q30KQ1 61 aa-4.82□□□□□ -3.18
LINC00648-203ENST00000556923 RPL13AP3Q6NVV1 102 aa-4.82□□□□□ -3.18
LINC00648-203ENST00000556923 TSC22D3Q99576 134 aa-4.82□□□□□ -3.18
LINC00648-203ENST00000556923 LMO7Q8WWI1 1683 aa-4.83□□□□□ -3.18
LINC00648-203ENST00000556923 ABRACLQ9P1F3 81 aa-4.83□□□□□ -3.18
LINC00648-203ENST00000556923 CCDC180Q9P1Z9 1646 aa-4.85□□□□□ -3.19
LINC00648-203ENST00000556923 RAPGEF2Q9Y4G8 1499 aa-4.85□□□□□ -3.19
LINC00648-203ENST00000556923 UQCRHP07919 91 aa-4.85□□□□□ -3.19
LINC00648-203ENST00000556923 ETDBQ3ZM63 59 aa-4.85□□□□□ -3.19
LINC00648-203ENST00000556923 IFI27P40305 119 aaPredicted RBP-4.86□□□□□ -3.19
LINC00648-203ENST00000556923 PPP3R1P63098 170 aa-4.86□□□□□ -3.19
LINC00648-203ENST00000556923 CYB5AP00167 134 aa-4.88□□□□□ -3.19
LINC00648-203ENST00000556923 CD52P31358 61 aa-4.88□□□□□ -3.19
LINC00648-203ENST00000556923 GNG4P50150 75 aa-4.88□□□□□ -3.19
LINC00648-203ENST00000556923 C3P01024 1663 aa-4.89□□□□□ -3.19
LINC00648-203ENST00000556923 PLGLAQ15195 96 aa-4.89□□□□□ -3.19
LINC00648-203ENST00000556923 UNC13AQ9UPW8 1703 aa-4.91□□□□□ -3.2
LINC00648-203ENST00000556923 ARHGAP35Q9NRY4 1499 aa-4.91□□□□□ -3.2
LINC00648-203ENST00000556923 KCNQ1DNQ9H478 68 aa-4.91□□□□□ -3.2
LINC00648-203ENST00000556923 SCRIBQ14160 1630 aa-4.91□□□□□ -3.2
LINC00648-203ENST00000556923 RRBP1Q9P2E9 1410 aaKnown RBP-4.91□□□□□ -3.2
LINC00648-203ENST00000556923 NDUFB1O75438 58 aa-4.92□□□□□ -3.2
LINC00648-203ENST00000556923 LINC00032P0C843 101 aa-4.92□□□□□ -3.2
LINC00648-203ENST00000556923 ZNF720Q7Z2F6 126 aa-4.93□□□□□ -3.2
LINC00648-203ENST00000556923 ATOX1O00244 68 aa-4.94□□□□□ -3.2
LINC00648-203ENST00000556923 UBL5Q9BZL1 73 aa-4.94□□□□□ -3.2
LINC00648-203ENST00000556923 PZPP20742 1482 aa-4.94□□□□□ -3.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms