RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 SS18L2Q9UHA2 77 aa3.66□□□□□ -1.82
TMEM260-212ENST00000556810 ATOX1O00244 68 aa3.65□□□□□ -1.83
TMEM260-212ENST00000556810 BPY2O14599 106 aa3.65□□□□□ -1.83
TMEM260-212ENST00000556810 HIST1H4AP62805 103 aaKnown RBP3.65□□□□□ -1.83
TMEM260-212ENST00000556810 LINC00483Q53H64 154 aa3.65□□□□□ -1.83
TMEM260-212ENST00000556810 SMIM20Q8N5G0 67 aa3.65□□□□□ -1.83
TMEM260-212ENST00000556810 A0A087X002 238 aa3.64□□□□□ -1.83
TMEM260-212ENST00000556810 IGKV3D-7A0A0C4DH55 119 aa3.64□□□□□ -1.83
TMEM260-212ENST00000556810 C9orf153Q5TBE3 101 aa3.64□□□□□ -1.83
TMEM260-212ENST00000556810 IGFL1Q6UW32 110 aa3.64□□□□□ -1.83
TMEM260-212ENST00000556810 SCXQ7RTU7 201 aa3.64□□□□□ -1.83
TMEM260-212ENST00000556810 SSBP3-AS1Q7Z2R9 100 aa3.64□□□□□ -1.83
TMEM260-212ENST00000556810 NOTCH2NLQ7Z3S9 236 aa3.64□□□□□ -1.83
TMEM260-212ENST00000556810 KRTAP11-1Q8IUC1 163 aa3.64□□□□□ -1.83
TMEM260-212ENST00000556810 C3orf22Q8N5N4 141 aa3.64□□□□□ -1.83
TMEM260-212ENST00000556810 ANAPC13Q9BS18 74 aa3.64□□□□□ -1.83
TMEM260-212ENST00000556810 J3KT08 172 aa3.63□□□□□ -1.83
TMEM260-212ENST00000556810 SRRM2Q9UQ35 2752 aaKnown RBP3.62□□□□□ -1.83
TMEM260-212ENST00000556810 APOBP04114 4563 aaKnown RBP3.62□□□□□ -1.83
TMEM260-212ENST00000556810 LRP1BQ9NZR2 4599 aa3.62□□□□□ -1.83
TMEM260-212ENST00000556810 FAM236AA0A1B0GUQ0 79 aa3.62□□□□□ -1.83
TMEM260-212ENST00000556810 FAM236BA0A1B0GV22 79 aa3.62□□□□□ -1.83
TMEM260-212ENST00000556810 A0A1W2PNM2 257 aa3.62□□□□□ -1.83
TMEM260-212ENST00000556810 KRTAP10-1P60331 282 aa3.62□□□□□ -1.83
TMEM260-212ENST00000556810 FAM229BQ4G0N7 80 aa3.62□□□□□ -1.83
TMEM260-212ENST00000556810 DMBT1Q9UGM3 2413 aaPredicted RBP3.62□□□□□ -1.83
TMEM260-212ENST00000556810 NDUFB1O75438 58 aa3.61□□□□□ -1.83
TMEM260-212ENST00000556810 CD164Q04900 197 aa3.61□□□□□ -1.83
TMEM260-212ENST00000556810 A0A087WSZ3 146 aa3.6□□□□□ -1.83
TMEM260-212ENST00000556810 SPINK6Q6UWN8 80 aa3.6□□□□□ -1.83
TMEM260-212ENST00000556810 UQCRQO14949 82 aa3.58□□□□□ -1.84
TMEM260-212ENST00000556810 MOBPQ13875 183 aa3.58□□□□□ -1.84
TMEM260-212ENST00000556810 DNAH5Q8TE73 4624 aa3.57□□□□□ -1.84
TMEM260-212ENST00000556810 COX7CP15954 63 aa3.57□□□□□ -1.84
TMEM260-212ENST00000556810 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
TMEM260-212ENST00000556810 SERP2Q8N6R1 65 aa3.57□□□□□ -1.84
TMEM260-212ENST00000556810 LIMD2Q9BT23 127 aa3.57□□□□□ -1.84
TMEM260-212ENST00000556810 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
TMEM260-212ENST00000556810 SPAG11AQ6PDA7 123 aa3.56□□□□□ -1.84
TMEM260-212ENST00000556810 FLG2Q5D862 2391 aaPredicted RBP3.55□□□□□ -1.84
TMEM260-212ENST00000556810 TRAV7A0A075B6U4 112 aa3.55□□□□□ -1.84
TMEM260-212ENST00000556810 A0A087WVE0 104 aa3.55□□□□□ -1.84
TMEM260-212ENST00000556810 IGKV4-1P06312 121 aa3.55□□□□□ -1.84
TMEM260-212ENST00000556810 ASB16-AS1Q495Z4 193 aa3.55□□□□□ -1.84
TMEM260-212ENST00000556810 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
TMEM260-212ENST00000556810 MYCBP2O75592 4640 aa3.55□□□□□ -1.84
TMEM260-212ENST00000556810 A8MWP4 228 aa3.54□□□□□ -1.84
TMEM260-212ENST00000556810 HCG22E2RYF7 251 aa3.54□□□□□ -1.84
TMEM260-212ENST00000556810 SPINK1P00995 79 aa3.54□□□□□ -1.84
TMEM260-212ENST00000556810 Q5VSD8 79 aa3.54□□□□□ -1.84
TMEM260-212ENST00000556810 Q5XG85 94 aa3.54□□□□□ -1.84
TMEM260-212ENST00000556810 TYMSOSQ8TAI1 123 aa3.54□□□□□ -1.84
TMEM260-212ENST00000556810 LINC00472Q9H8W2 130 aa3.54□□□□□ -1.84
TMEM260-212ENST00000556810 VPS13BQ7Z7G8 4022 aa3.54□□□□□ -1.84
TMEM260-212ENST00000556810 FAT1Q14517 4588 aa3.53□□□□□ -1.84
TMEM260-212ENST00000556810 SMR3BP02814 79 aaPredicted RBP3.53□□□□□ -1.84
TMEM260-212ENST00000556810 DSCR10P59022 87 aa3.53□□□□□ -1.84
TMEM260-212ENST00000556810 RPS29P62273 56 aaKnown RBP3.53□□□□□ -1.84
TMEM260-212ENST00000556810 PRR15Q8IV56 129 aa3.53□□□□□ -1.84
TMEM260-212ENST00000556810 OCR1Q9BZK8 76 aa3.53□□□□□ -1.84
TMEM260-212ENST00000556810 NDUFC1O43677 76 aa3.52□□□□□ -1.85
TMEM260-212ENST00000556810 HRCT1Q6UXD1 115 aa3.52□□□□□ -1.85
TMEM260-212ENST00000556810 C8orf87E5RJ46 101 aa3.51□□□□□ -1.85
TMEM260-212ENST00000556810 K7EQZ3 153 aa3.51□□□□□ -1.85
TMEM260-212ENST00000556810 C5orf47Q569G3 176 aa3.51□□□□□ -1.85
TMEM260-212ENST00000556810 TP53AIP1Q9HCN2 124 aa3.51□□□□□ -1.85
TMEM260-212ENST00000556810 ANAPC11Q9NYG5 84 aa3.51□□□□□ -1.85
TMEM260-212ENST00000556810 A0A0G2JQZ4 141 aa3.5□□□□□ -1.85
TMEM260-212ENST00000556810 CASC2Q6XLA1 102 aa3.5□□□□□ -1.85
TMEM260-212ENST00000556810 Q8N9L7 120 aa3.5□□□□□ -1.85
TMEM260-212ENST00000556810 IGLV7-46A0A075B6I9 117 aa3.49□□□□□ -1.85
TMEM260-212ENST00000556810 A0A1B0GVX0 72 aa3.49□□□□□ -1.85
TMEM260-212ENST00000556810 H3BPC8 53 aa3.49□□□□□ -1.85
TMEM260-212ENST00000556810 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
TMEM260-212ENST00000556810 MP68P56378 58 aa3.49□□□□□ -1.85
TMEM260-212ENST00000556810 DEFB116Q30KQ4 102 aa3.49□□□□□ -1.85
TMEM260-212ENST00000556810 hDV103S1A0JD37 113 aa3.48□□□□□ -1.85
TMEM260-212ENST00000556810 CCDC179H3BU77 68 aa3.48□□□□□ -1.85
TMEM260-212ENST00000556810 LINC00304Q8N9R0 145 aa3.48□□□□□ -1.85
TMEM260-212ENST00000556810 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
TMEM260-212ENST00000556810 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
TMEM260-212ENST00000556810 KLKP1Q107X0 134 aa3.47□□□□□ -1.85
TMEM260-212ENST00000556810 KRTAP13-2Q52LG2 175 aa3.47□□□□□ -1.85
TMEM260-212ENST00000556810 TMEM254Q8TBM7 123 aa3.47□□□□□ -1.85
TMEM260-212ENST00000556810 Q96NJ1 140 aa3.47□□□□□ -1.85
TMEM260-212ENST00000556810 C8orf17Q9NRJ1 99 aa3.47□□□□□ -1.85
TMEM260-212ENST00000556810 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
TMEM260-212ENST00000556810 LINC00313P59037 77 aa3.46□□□□□ -1.86
TMEM260-212ENST00000556810 SEC61GP60059 68 aa3.46□□□□□ -1.86
TMEM260-212ENST00000556810 TMEM258P61165 79 aa3.46□□□□□ -1.86
TMEM260-212ENST00000556810 WFDC13Q8IUB5 93 aa3.46□□□□□ -1.86
TMEM260-212ENST00000556810 C20orf197Q8N268 126 aa3.46□□□□□ -1.86
TMEM260-212ENST00000556810 MRPL34Q9BQ48 92 aaKnown RBP3.46□□□□□ -1.86
TMEM260-212ENST00000556810 ATP5EP56381 51 aaPredicted RBP3.45□□□□□ -1.86
TMEM260-212ENST00000556810 MMP24-AS1A0A0U1RRL7 71 aa3.44□□□□□ -1.86
TMEM260-212ENST00000556810 NDUFS5O43920 106 aa3.44□□□□□ -1.86
TMEM260-212ENST00000556810 TRAV22A0A0B4J277 110 aa3.43□□□□□ -1.86
TMEM260-212ENST00000556810 C1orf195Q5TG92 126 aa3.43□□□□□ -1.86
TMEM260-212ENST00000556810 HMCN2Q8NDA2 5059 aa3.42□□□□□ -1.86
TMEM260-212ENST00000556810 LRP1Q07954 4544 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms