RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 LINC00472Q9H8W2 130 aa8.32□□□□□ -1.08
TRAPPC6B-206ENST00000556765 IGKV4-1P06312 121 aa8.31□□□□□ -1.08
TRAPPC6B-206ENST00000556765 ASB16-AS1Q495Z4 193 aa8.31□□□□□ -1.08
TRAPPC6B-206ENST00000556765 Q5XG85 94 aa8.31□□□□□ -1.08
TRAPPC6B-206ENST00000556765 A0A087WVE0 104 aa8.3□□□□□ -1.08
TRAPPC6B-206ENST00000556765 A0A087X002 238 aa8.29□□□□□ -1.08
TRAPPC6B-206ENST00000556765 LCE2DQ5TA82 110 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC6B-206ENST00000556765 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
TRAPPC6B-206ENST00000556765 NDUFB1O75438 58 aa8.28□□□□□ -1.08
TRAPPC6B-206ENST00000556765 DSCR10P59022 87 aa8.28□□□□□ -1.08
TRAPPC6B-206ENST00000556765 KRTAP13-2Q52LG2 175 aa8.28□□□□□ -1.08
TRAPPC6B-206ENST00000556765 A8MWP4 228 aa8.27□□□□□ -1.09
TRAPPC6B-206ENST00000556765 RPS29P62273 56 aaKnown RBP8.27□□□□□ -1.09
TRAPPC6B-206ENST00000556765 TYMSOSQ8TAI1 123 aa8.27□□□□□ -1.09
TRAPPC6B-206ENST00000556765 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
TRAPPC6B-206ENST00000556765 SPAG11AQ6PDA7 123 aa8.25□□□□□ -1.09
TRAPPC6B-206ENST00000556765 HRCT1Q6UXD1 115 aa8.25□□□□□ -1.09
TRAPPC6B-206ENST00000556765 SPINK1P00995 79 aa8.24□□□□□ -1.09
TRAPPC6B-206ENST00000556765 K7EQZ3 153 aa8.23□□□□□ -1.09
TRAPPC6B-206ENST00000556765 PRR15Q8IV56 129 aa8.23□□□□□ -1.09
TRAPPC6B-206ENST00000556765 Q96NJ1 140 aa8.23□□□□□ -1.09
TRAPPC6B-206ENST00000556765 SERP2Q8N6R1 65 aa8.22□□□□□ -1.09
TRAPPC6B-206ENST00000556765 Q8N9L7 120 aa8.22□□□□□ -1.09
TRAPPC6B-206ENST00000556765 HCG22E2RYF7 251 aa8.21□□□□□ -1.1
TRAPPC6B-206ENST00000556765 PRR4Q16378 134 aa8.21□□□□□ -1.1
TRAPPC6B-206ENST00000556765 MUC17Q685J3 4493 aa8.21□□□□□ -1.1
TRAPPC6B-206ENST00000556765 UQCRQO14949 82 aa8.2□□□□□ -1.1
TRAPPC6B-206ENST00000556765 TRAV7A0A075B6U4 112 aa8.19□□□□□ -1.1
TRAPPC6B-206ENST00000556765 COX7CP15954 63 aa8.19□□□□□ -1.1
TRAPPC6B-206ENST00000556765 DEFB116Q30KQ4 102 aa8.18□□□□□ -1.1
TRAPPC6B-206ENST00000556765 LINC00304Q8N9R0 145 aa8.18□□□□□ -1.1
TRAPPC6B-206ENST00000556765 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
TRAPPC6B-206ENST00000556765 PRR26Q8N8Z3 221 aa8.15□□□□□ -1.1
TRAPPC6B-206ENST00000556765 C8orf87E5RJ46 101 aa8.14□□□□□ -1.11
TRAPPC6B-206ENST00000556765 CASC2Q6XLA1 102 aa8.13□□□□□ -1.11
TRAPPC6B-206ENST00000556765 MMP24-AS1A0A0U1RRL7 71 aa8.1□□□□□ -1.11
TRAPPC6B-206ENST00000556765 C1orf195Q5TG92 126 aa8.1□□□□□ -1.11
TRAPPC6B-206ENST00000556765 OCR1Q9BZK8 76 aa8.1□□□□□ -1.11
TRAPPC6B-206ENST00000556765 C8orf17Q9NRJ1 99 aa8.1□□□□□ -1.11
TRAPPC6B-206ENST00000556765 hDV103S1A0JD37 113 aa8.09□□□□□ -1.11
TRAPPC6B-206ENST00000556765 IGHV6-1A0A0B4J1U7 121 aa8.07□□□□□ -1.12
TRAPPC6B-206ENST00000556765 WFDC13Q8IUB5 93 aa8.07□□□□□ -1.12
TRAPPC6B-206ENST00000556765 TMEM254Q8TBM7 123 aa8.07□□□□□ -1.12
TRAPPC6B-206ENST00000556765 TP53AIP1Q9HCN2 124 aa8.07□□□□□ -1.12
TRAPPC6B-206ENST00000556765 CCDC179H3BU77 68 aa8.06□□□□□ -1.12
TRAPPC6B-206ENST00000556765 C5orf47Q569G3 176 aa8.04□□□□□ -1.12
TRAPPC6B-206ENST00000556765 MRPL34Q9BQ48 92 aaKnown RBP8.03□□□□□ -1.12
TRAPPC6B-206ENST00000556765 KLKP1Q107X0 134 aa8.02□□□□□ -1.13
TRAPPC6B-206ENST00000556765 H3BPC8 53 aa8.01□□□□□ -1.13
TRAPPC6B-206ENST00000556765 NDUFC1O43677 76 aa8.01□□□□□ -1.13
TRAPPC6B-206ENST00000556765 LINC00313P59037 77 aa8.01□□□□□ -1.13
TRAPPC6B-206ENST00000556765 C20orf197Q8N268 126 aa7.99□□□□□ -1.13
TRAPPC6B-206ENST00000556765 KRTAP9-7A8MTY7 169 aa7.98□□□□□ -1.13
TRAPPC6B-206ENST00000556765 MP68P56378 58 aa7.98□□□□□ -1.13
TRAPPC6B-206ENST00000556765 TRAV22A0A0B4J277 110 aa7.94□□□□□ -1.14
TRAPPC6B-206ENST00000556765 TMEM258P61165 79 aa7.93□□□□□ -1.14
TRAPPC6B-206ENST00000556765 NDUFS5O43920 106 aa7.92□□□□□ -1.14
TRAPPC6B-206ENST00000556765 FP248Q71RG6 208 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC6B-206ENST00000556765 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC6B-206ENST00000556765 H0Y9P7 68 aa7.9□□□□□ -1.14
TRAPPC6B-206ENST00000556765 NOTCH2NLQ7Z3S9 236 aa7.9□□□□□ -1.14
TRAPPC6B-206ENST00000556765 ATP5EP56381 51 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC6B-206ENST00000556765 KRTAP16-1A8MUX0 517 aa7.87□□□□□ -1.15
TRAPPC6B-206ENST00000556765 ZCCHC13Q8WW36 166 aaKnown RBP7.87□□□□□ -1.15
TRAPPC6B-206ENST00000556765 SNURFQ9Y675 71 aa7.87□□□□□ -1.15
TRAPPC6B-206ENST00000556765 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC6B-206ENST00000556765 H7BZZ5 65 aa7.85□□□□□ -1.15
TRAPPC6B-206ENST00000556765 LINC00208Q96KT6 92 aa7.84□□□□□ -1.15
TRAPPC6B-206ENST00000556765 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
TRAPPC6B-206ENST00000556765 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
TRAPPC6B-206ENST00000556765 C1orf64Q8NEQ6 169 aa7.82□□□□□ -1.16
TRAPPC6B-206ENST00000556765 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
TRAPPC6B-206ENST00000556765 RETNLBQ9BQ08 111 aa7.8□□□□□ -1.16
TRAPPC6B-206ENST00000556765 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
TRAPPC6B-206ENST00000556765 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
TRAPPC6B-206ENST00000556765 FAM236DA0A1B0GTK5 79 aa7.78□□□□□ -1.16
TRAPPC6B-206ENST00000556765 FAM236CP0DP71 79 aa7.78□□□□□ -1.16
TRAPPC6B-206ENST00000556765 KRTAP13-3Q3SY46 172 aa7.78□□□□□ -1.16
TRAPPC6B-206ENST00000556765 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
TRAPPC6B-206ENST00000556765 A8MUU9 505 aa7.76□□□□□ -1.17
TRAPPC6B-206ENST00000556765 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
TRAPPC6B-206ENST00000556765 IGLV7-46A0A075B6I9 117 aa7.74□□□□□ -1.17
TRAPPC6B-206ENST00000556765 Q5W150 140 aa7.72□□□□□ -1.17
TRAPPC6B-206ENST00000556765 Q75L30 129 aa7.72□□□□□ -1.17
TRAPPC6B-206ENST00000556765 KRTAP4-1Q9BYQ7 146 aa7.72□□□□□ -1.17
TRAPPC6B-206ENST00000556765 C9orf92A6NGG3 77 aa7.71□□□□□ -1.18
TRAPPC6B-206ENST00000556765 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
TRAPPC6B-206ENST00000556765 RPS28P62857 69 aaKnown RBP7.69□□□□□ -1.18
TRAPPC6B-206ENST00000556765 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
TRAPPC6B-206ENST00000556765 CYP4F30PQ9H0H9 118 aa7.68□□□□□ -1.18
TRAPPC6B-206ENST00000556765 USH2AO75445 5202 aa7.67□□□□□ -1.18
TRAPPC6B-206ENST00000556765 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
TRAPPC6B-206ENST00000556765 SERP1Q9Y6X1 66 aa7.66□□□□□ -1.18
TRAPPC6B-206ENST00000556765 C7orf65Q6ZTY9 151 aa7.65□□□□□ -1.18
TRAPPC6B-206ENST00000556765 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC6B-206ENST00000556765 MT1HP80294 61 aa7.63□□□□□ -1.19
TRAPPC6B-206ENST00000556765 RPL37P61927 97 aaKnown RBP7.61□□□□□ -1.19
TRAPPC6B-206ENST00000556765 PCOTHQ58A44 107 aa7.61□□□□□ -1.19
TRAPPC6B-206ENST00000556765 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC6B-206ENST00000556765 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms