RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 NOTCH2NLQ7Z3S9 236 aa5.42□□□□□ -1.54
SNX6-208ENST00000556712 KRTAP16-1A8MUX0 517 aa5.41□□□□□ -1.54
SNX6-208ENST00000556712 IGHV6-1A0A0B4J1U7 121 aa5.4□□□□□ -1.54
SNX6-208ENST00000556712 TAX1BP3O14907 124 aa5.4□□□□□ -1.54
SNX6-208ENST00000556712 LINC00313P59037 77 aa5.4□□□□□ -1.54
SNX6-208ENST00000556712 LYRM7Q5U5X0 104 aa5.4□□□□□ -1.54
SNX6-208ENST00000556712 COX6B2Q6YFQ2 88 aa5.39□□□□□ -1.55
SNX6-208ENST00000556712 Q6ZQT0 140 aa5.39□□□□□ -1.55
SNX6-208ENST00000556712 MTURNQ8N3F0 131 aa5.39□□□□□ -1.55
SNX6-208ENST00000556712 C14orf132Q9NPU4 83 aa5.39□□□□□ -1.55
SNX6-208ENST00000556712 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
SNX6-208ENST00000556712 C9orf118A6NHY6 69 aa5.38□□□□□ -1.55
SNX6-208ENST00000556712 JMJD7-PLA2G4BH0Y9G9 81 aa5.38□□□□□ -1.55
SNX6-208ENST00000556712 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
SNX6-208ENST00000556712 TRBV20-1A0A075B6N2 111 aa5.37□□□□□ -1.55
SNX6-208ENST00000556712 LOC110117498A0A087WWA1 95 aa5.37□□□□□ -1.55
SNX6-208ENST00000556712 A0A1B0GVX0 72 aa5.36□□□□□ -1.55
SNX6-208ENST00000556712 A0A1W2PPM0 123 aa5.36□□□□□ -1.55
SNX6-208ENST00000556712 C8orf87E5RJ46 101 aa5.33□□□□□ -1.56
SNX6-208ENST00000556712 C21orf62-AS1Q17RA5 79 aa5.33□□□□□ -1.56
SNX6-208ENST00000556712 H3BT86 120 aa5.32□□□□□ -1.56
SNX6-208ENST00000556712 J3KT08 172 aa5.32□□□□□ -1.56
SNX6-208ENST00000556712 M0R2T5 61 aa5.32□□□□□ -1.56
SNX6-208ENST00000556712 PDE6GP18545 87 aa5.32□□□□□ -1.56
SNX6-208ENST00000556712 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
SNX6-208ENST00000556712 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
SNX6-208ENST00000556712 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
SNX6-208ENST00000556712 SPCS1Q9Y6A9 102 aa5.31□□□□□ -1.56
SNX6-208ENST00000556712 KRTAP10-6P60371 365 aaPredicted RBP5.3□□□□□ -1.56
SNX6-208ENST00000556712 IGKV3D-7A0A0C4DH55 119 aa5.29□□□□□ -1.56
SNX6-208ENST00000556712 A0A1B0GW54 56 aa5.29□□□□□ -1.56
SNX6-208ENST00000556712 A8MWP4 228 aa5.29□□□□□ -1.56
SNX6-208ENST00000556712 NDUFB1O75438 58 aa5.28□□□□□ -1.56
SNX6-208ENST00000556712 C8orf17Q9NRJ1 99 aa5.28□□□□□ -1.56
SNX6-208ENST00000556712 NREPQ16612 68 aa5.27□□□□□ -1.57
SNX6-208ENST00000556712 COL5A1-AS1Q5SY13 56 aa5.26□□□□□ -1.57
SNX6-208ENST00000556712 HRES1P13985 223 aa5.25□□□□□ -1.57
SNX6-208ENST00000556712 ZCCHC13Q8WW36 166 aaKnown RBP5.25□□□□□ -1.57
SNX6-208ENST00000556712 PRR15Q8IV56 129 aa5.24□□□□□ -1.57
SNX6-208ENST00000556712 MMP24-AS1A0A0U1RRL7 71 aa5.23□□□□□ -1.57
SNX6-208ENST00000556712 FAM236DA0A1B0GTK5 79 aa5.23□□□□□ -1.57
SNX6-208ENST00000556712 PCP4L1A6NKN8 68 aa5.23□□□□□ -1.57
SNX6-208ENST00000556712 K7EP34 96 aa5.23□□□□□ -1.57
SNX6-208ENST00000556712 K7EQZ3 153 aa5.23□□□□□ -1.57
SNX6-208ENST00000556712 FAM236CP0DP71 79 aa5.23□□□□□ -1.57
SNX6-208ENST00000556712 Q6ZVQ6 151 aa5.23□□□□□ -1.57
SNX6-208ENST00000556712 Q8N9P0 234 aaPredicted RBP5.23□□□□□ -1.57
SNX6-208ENST00000556712 MPLKIPQ8TAP9 179 aa5.22□□□□□ -1.57
SNX6-208ENST00000556712 PRO0461Q9UI25 63 aa5.22□□□□□ -1.57
SNX6-208ENST00000556712 BPY2O14599 106 aa5.19□□□□□ -1.58
SNX6-208ENST00000556712 SPINK7P58062 85 aa5.19□□□□□ -1.58
SNX6-208ENST00000556712 Q8N9L7 120 aa5.19□□□□□ -1.58
SNX6-208ENST00000556712 TMEM254Q8TBM7 123 aa5.19□□□□□ -1.58
SNX6-208ENST00000556712 MRPL34Q9BQ48 92 aaKnown RBP5.19□□□□□ -1.58
SNX6-208ENST00000556712 RBM12B-AS1Q9P1G2 102 aa5.19□□□□□ -1.58
SNX6-208ENST00000556712 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
SNX6-208ENST00000556712 hDV103S1A0JD37 113 aa5.17□□□□□ -1.58
SNX6-208ENST00000556712 NDUFS5O43920 106 aa5.16□□□□□ -1.58
SNX6-208ENST00000556712 WFDC13Q8IUB5 93 aa5.15□□□□□ -1.59
SNX6-208ENST00000556712 LINC00846Q9NV44 126 aa5.15□□□□□ -1.59
SNX6-208ENST00000556712 GTF2H5Q6ZYL4 71 aa5.13□□□□□ -1.59
SNX6-208ENST00000556712 KRTAP9-8Q9BYQ0 159 aa5.13□□□□□ -1.59
SNX6-208ENST00000556712 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
SNX6-208ENST00000556712 CASC2Q6XLA1 102 aa5.11□□□□□ -1.59
SNX6-208ENST00000556712 UBL5Q9BZL1 73 aa5.11□□□□□ -1.59
SNX6-208ENST00000556712 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
SNX6-208ENST00000556712 HCG22E2RYF7 251 aa5.09□□□□□ -1.59
SNX6-208ENST00000556712 MT2AP02795 61 aa5.09□□□□□ -1.59
SNX6-208ENST00000556712 ETDBQ3ZM63 59 aa5.09□□□□□ -1.59
SNX6-208ENST00000556712 Q5W150 140 aa5.09□□□□□ -1.59
SNX6-208ENST00000556712 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
SNX6-208ENST00000556712 F8W1H4 67 aa5.08□□□□□ -1.6
SNX6-208ENST00000556712 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
SNX6-208ENST00000556712 MT1FP04733 61 aa5.06□□□□□ -1.6
SNX6-208ENST00000556712 C7orf65Q6ZTY9 151 aa5.04□□□□□ -1.6
SNX6-208ENST00000556712 CXCL6P80162 114 aa5.02□□□□□ -1.61
SNX6-208ENST00000556712 KRTAP10-10P60014 251 aa5□□□□□ -1.61
SNX6-208ENST00000556712 LCE1DQ5T752 114 aa5□□□□□ -1.61
SNX6-208ENST00000556712 USH2AO75445 5202 aa4.99□□□□□ -1.61
SNX6-208ENST00000556712 H1FX-AS1Q4G0G2 97 aa4.98□□□□□ -1.61
SNX6-208ENST00000556712 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
SNX6-208ENST00000556712 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
SNX6-208ENST00000556712 C4orf26Q17RF5 130 aa4.97□□□□□ -1.61
SNX6-208ENST00000556712 KRTAP9-3Q9BYQ3 159 aa4.97□□□□□ -1.61
SNX6-208ENST00000556712 A0A1B0GV90 55 aa4.94□□□□□ -1.62
SNX6-208ENST00000556712 FAM240AA0A1B0GVK7 77 aa4.92□□□□□ -1.62
SNX6-208ENST00000556712 ACYP1P07311 99 aa4.92□□□□□ -1.62
SNX6-208ENST00000556712 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
SNX6-208ENST00000556712 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
SNX6-208ENST00000556712 ATP5EP2Q5VTU8 51 aa4.9□□□□□ -1.63
SNX6-208ENST00000556712 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
SNX6-208ENST00000556712 HIST1H4AP62805 103 aaKnown RBP4.89□□□□□ -1.63
SNX6-208ENST00000556712 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
SNX6-208ENST00000556712 A0A087WVE0 104 aa4.87□□□□□ -1.63
SNX6-208ENST00000556712 C1orf64Q8NEQ6 169 aa4.87□□□□□ -1.63
SNX6-208ENST00000556712 TRAV22A0A0B4J277 110 aa4.86□□□□□ -1.63
SNX6-208ENST00000556712 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
SNX6-208ENST00000556712 C5orf47Q569G3 176 aa4.86□□□□□ -1.63
SNX6-208ENST00000556712 S4R3F8 94 aa4.85□□□□□ -1.63
SNX6-208ENST00000556712 CYP4F30PQ9H0H9 118 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms