RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 LYSTQ99698 3801 aa3.22□□□□□ -1.89
GPHN-213ENST00000556501 SRRM2Q9UQ35 2752 aaKnown RBP3.21□□□□□ -1.9
GPHN-213ENST00000556501 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
GPHN-213ENST00000556501 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
GPHN-213ENST00000556501 FAM229BQ4G0N7 80 aa3.21□□□□□ -1.9
GPHN-213ENST00000556501 SPANXA2-OT1Q8N9U9 137 aa3.21□□□□□ -1.9
GPHN-213ENST00000556501 LINC00208Q96KT6 92 aa3.21□□□□□ -1.9
GPHN-213ENST00000556501 C8orf17Q9NRJ1 99 aa3.21□□□□□ -1.9
GPHN-213ENST00000556501 PLECQ15149 4684 aaKnown RBP3.21□□□□□ -1.9
GPHN-213ENST00000556501 LY6G6CO95867 125 aa3.2□□□□□ -1.9
GPHN-213ENST00000556501 CD164Q04900 197 aa3.2□□□□□ -1.9
GPHN-213ENST00000556501 Q75L30 129 aa3.2□□□□□ -1.9
GPHN-213ENST00000556501 C1orf64Q8NEQ6 169 aa3.2□□□□□ -1.9
GPHN-213ENST00000556501 TP53AIP1Q9HCN2 124 aa3.2□□□□□ -1.9
GPHN-213ENST00000556501 ANAPC11Q9NYG5 84 aa3.2□□□□□ -1.9
GPHN-213ENST00000556501 STARD9Q9P2P6 4700 aa3.19□□□□□ -1.9
GPHN-213ENST00000556501 DNAH17Q9UFH2 4485 aa3.19□□□□□ -1.9
GPHN-213ENST00000556501 DNAH6Q9C0G6 4158 aa3.19□□□□□ -1.9
GPHN-213ENST00000556501 IGHV6-1A0A0B4J1U7 121 aa3.18□□□□□ -1.9
GPHN-213ENST00000556501 CDK2AP2O75956 126 aa3.18□□□□□ -1.9
GPHN-213ENST00000556501 KRTAP10-2P60368 255 aa3.18□□□□□ -1.9
GPHN-213ENST00000556501 Q6ZSA8 131 aa3.18□□□□□ -1.9
GPHN-213ENST00000556501 KRTAP3-1Q9BYR8 98 aa3.18□□□□□ -1.9
GPHN-213ENST00000556501 ALMS1Q8TCU4 4167 aa3.18□□□□□ -1.9
GPHN-213ENST00000556501 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
GPHN-213ENST00000556501 SSBP3-AS1Q7Z2R9 100 aa3.17□□□□□ -1.9
GPHN-213ENST00000556501 CIRBP-AS1Q8TBR5 109 aa3.17□□□□□ -1.9
GPHN-213ENST00000556501 MRPL34Q9BQ48 92 aaKnown RBP3.17□□□□□ -1.9
GPHN-213ENST00000556501 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
GPHN-213ENST00000556501 KRTAP10-1P60331 282 aa3.16□□□□□ -1.9
GPHN-213ENST00000556501 PRR4Q16378 134 aa3.16□□□□□ -1.9
GPHN-213ENST00000556501 Q1T7F1 81 aa3.16□□□□□ -1.9
GPHN-213ENST00000556501 MPLKIPQ8TAP9 179 aa3.16□□□□□ -1.9
GPHN-213ENST00000556501 HECTD4Q9Y4D8 3996 aa3.16□□□□□ -1.9
GPHN-213ENST00000556501 C8orf87E5RJ46 101 aa3.15□□□□□ -1.91
GPHN-213ENST00000556501 LINC00336Q6ZUF6 198 aa3.15□□□□□ -1.91
GPHN-213ENST00000556501 IGLV7-46A0A075B6I9 117 aa3.14□□□□□ -1.91
GPHN-213ENST00000556501 A0A087X002 238 aa3.14□□□□□ -1.91
GPHN-213ENST00000556501 NDUFS5O43920 106 aa3.14□□□□□ -1.91
GPHN-213ENST00000556501 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
GPHN-213ENST00000556501 KRTAP13-3Q3SY46 172 aa3.14□□□□□ -1.91
GPHN-213ENST00000556501 KRTAP13-2Q52LG2 175 aa3.14□□□□□ -1.91
GPHN-213ENST00000556501 NOTCH2NLQ7Z3S9 236 aa3.14□□□□□ -1.91
GPHN-213ENST00000556501 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
GPHN-213ENST00000556501 LOC101927531A0A1B0GV80 90 aa3.13□□□□□ -1.91
GPHN-213ENST00000556501 SPINK6Q6UWN8 80 aa3.13□□□□□ -1.91
GPHN-213ENST00000556501 KRTAP4-5Q9BYR2 181 aa3.13□□□□□ -1.91
GPHN-213ENST00000556501 V9GYY9 64 aa3.13□□□□□ -1.91
GPHN-213ENST00000556501 DNAH2Q9P225 4427 aa3.12□□□□□ -1.91
GPHN-213ENST00000556501 KRTAP1-4P0C5Y4 121 aa3.12□□□□□ -1.91
GPHN-213ENST00000556501 C1orf195Q5TG92 126 aa3.12□□□□□ -1.91
GPHN-213ENST00000556501 PCOTHQ58A44 107 aa3.11□□□□□ -1.91
GPHN-213ENST00000556501 COA5Q86WW8 74 aa3.11□□□□□ -1.91
GPHN-213ENST00000556501 DNAH8Q96JB1 4490 aa3.11□□□□□ -1.91
GPHN-213ENST00000556501 BRK1Q8WUW1 75 aa3.1□□□□□ -1.91
GPHN-213ENST00000556501 LIMD2Q9BT23 127 aa3.1□□□□□ -1.91
GPHN-213ENST00000556501 KMT2AQ03164 3969 aa3.09□□□□□ -1.91
GPHN-213ENST00000556501 Q5W150 140 aa3.09□□□□□ -1.91
GPHN-213ENST00000556501 Q8N9P0 234 aaPredicted RBP3.09□□□□□ -1.91
GPHN-213ENST00000556501 KRTAP17-1Q9BYP8 105 aa3.09□□□□□ -1.91
GPHN-213ENST00000556501 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
GPHN-213ENST00000556501 A8MUN3 132 aa3.08□□□□□ -1.92
GPHN-213ENST00000556501 KRTAP16-1A8MUX0 517 aa3.08□□□□□ -1.92
GPHN-213ENST00000556501 PSPHP1O15172 72 aa3.08□□□□□ -1.92
GPHN-213ENST00000556501 LINC00313P59037 77 aa3.08□□□□□ -1.92
GPHN-213ENST00000556501 HRES1P13985 223 aa3.07□□□□□ -1.92
GPHN-213ENST00000556501 Q5VV11 94 aa3.07□□□□□ -1.92
GPHN-213ENST00000556501 PRR26Q8N8Z3 221 aa3.07□□□□□ -1.92
GPHN-213ENST00000556501 FRAS1Q86XX4 4008 aa3.06□□□□□ -1.92
GPHN-213ENST00000556501 DNAH11Q96DT5 4516 aa3.06□□□□□ -1.92
GPHN-213ENST00000556501 PRR15LQ9BU68 103 aa3.06□□□□□ -1.92
GPHN-213ENST00000556501 DNAH5Q8TE73 4624 aa3.06□□□□□ -1.92
GPHN-213ENST00000556501 PKD1P98161 4303 aa3.05□□□□□ -1.92
GPHN-213ENST00000556501 SPINK1P00995 79 aa3.05□□□□□ -1.92
GPHN-213ENST00000556501 IGKV2-30P06310 120 aa3.05□□□□□ -1.92
GPHN-213ENST00000556501 RPS29P62273 56 aaKnown RBP3.05□□□□□ -1.92
GPHN-213ENST00000556501 TYMSOSQ8TAI1 123 aa3.05□□□□□ -1.92
GPHN-213ENST00000556501 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
GPHN-213ENST00000556501 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
GPHN-213ENST00000556501 LCE5AQ5TCM9 118 aa3.04□□□□□ -1.92
GPHN-213ENST00000556501 FAT2Q9NYQ8 4349 aa3.03□□□□□ -1.92
GPHN-213ENST00000556501 A0A1B0GVY2 172 aa3.03□□□□□ -1.92
GPHN-213ENST00000556501 LINC00304Q8N9R0 145 aa3.03□□□□□ -1.92
GPHN-213ENST00000556501 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
GPHN-213ENST00000556501 ACYP2P14621 99 aa3.02□□□□□ -1.93
GPHN-213ENST00000556501 SPAG11AQ6PDA7 123 aa3.02□□□□□ -1.93
GPHN-213ENST00000556501 SACSQ9NZJ4 4579 aa3.02□□□□□ -1.93
GPHN-213ENST00000556501 KRTAP10-4P60372 401 aaPredicted RBP3.01□□□□□ -1.93
GPHN-213ENST00000556501 RETNLBQ9BQ08 111 aa3.01□□□□□ -1.93
GPHN-213ENST00000556501 KMT2CQ8NEZ4 4911 aaKnown RBP3.01□□□□□ -1.93
GPHN-213ENST00000556501 IGKV2D-30A0A075B6S6 120 aa2.99□□□□□ -1.93
GPHN-213ENST00000556501 HYDINQ4G0P3 5121 aa2.99□□□□□ -1.93
GPHN-213ENST00000556501 LRP1BQ9NZR2 4599 aa2.99□□□□□ -1.93
GPHN-213ENST00000556501 A6NED7 52 aa2.98□□□□□ -1.93
GPHN-213ENST00000556501 A8MU10 97 aa2.98□□□□□ -1.93
GPHN-213ENST00000556501 SMR3BP02814 79 aaPredicted RBP2.98□□□□□ -1.93
GPHN-213ENST00000556501 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
GPHN-213ENST00000556501 Q8N1X5 172 aa2.98□□□□□ -1.93
GPHN-213ENST00000556501 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
GPHN-213ENST00000556501 RYR2Q92736 4967 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms