RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 SS18L2Q9UHA2 77 aa4.6□□□□□ -1.67
LINC00520-204ENST00000556417 A0A1B0GV72 72 aa4.59□□□□□ -1.67
LINC00520-204ENST00000556417 A0A1B0GX51 115 aa4.59□□□□□ -1.67
LINC00520-204ENST00000556417 K7ERJ3 54 aa4.58□□□□□ -1.68
LINC00520-204ENST00000556417 DNAL4O96015 105 aa4.58□□□□□ -1.68
LINC00520-204ENST00000556417 PYY3Q5JQD4 70 aa4.58□□□□□ -1.68
LINC00520-204ENST00000556417 HSD52Q0P140 79 aa4.57□□□□□ -1.68
LINC00520-204ENST00000556417 COX6CP09669 75 aa4.56□□□□□ -1.68
LINC00520-204ENST00000556417 ANKRD29Q8N6D5 301 aa4.56□□□□□ -1.68
LINC00520-204ENST00000556417 ORMDL1Q9P0S3 153 aa4.56□□□□□ -1.68
LINC00520-204ENST00000556417 A0A1W2PNM2 257 aa4.55□□□□□ -1.68
LINC00520-204ENST00000556417 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
LINC00520-204ENST00000556417 TMEM256-PLSCR3K7ERE1 68 aa4.54□□□□□ -1.68
LINC00520-204ENST00000556417 SCGB1C2P0DMR2 95 aa4.54□□□□□ -1.68
LINC00520-204ENST00000556417 DSCR10P59022 87 aa4.54□□□□□ -1.68
LINC00520-204ENST00000556417 SIGMAR1Q99720 223 aa4.54□□□□□ -1.68
LINC00520-204ENST00000556417 H3BQ85 93 aa4.53□□□□□ -1.68
LINC00520-204ENST00000556417 C20orf166-AS1Q96NR2 134 aa4.53□□□□□ -1.68
LINC00520-204ENST00000556417 UQCR10Q9UDW1 63 aa4.53□□□□□ -1.68
LINC00520-204ENST00000556417 TRBV7-4A0A0J9YYF1 115 aa4.52□□□□□ -1.69
LINC00520-204ENST00000556417 FAM240AA0A1B0GVK7 77 aa4.52□□□□□ -1.69
LINC00520-204ENST00000556417 A8MUU9 505 aa4.52□□□□□ -1.69
LINC00520-204ENST00000556417 IGKV4-1P06312 121 aa4.52□□□□□ -1.69
LINC00520-204ENST00000556417 DEFB116Q30KQ4 102 aa4.52□□□□□ -1.69
LINC00520-204ENST00000556417 CCKP06307 115 aa4.51□□□□□ -1.69
LINC00520-204ENST00000556417 LINC00313P59037 77 aa4.51□□□□□ -1.69
LINC00520-204ENST00000556417 VPS25Q9BRG1 176 aa4.51□□□□□ -1.69
LINC00520-204ENST00000556417 TRBV20-1A0A075B6N2 111 aa4.5□□□□□ -1.69
LINC00520-204ENST00000556417 TRACP01848 142 aa4.5□□□□□ -1.69
LINC00520-204ENST00000556417 C4orf26Q17RF5 130 aa4.5□□□□□ -1.69
LINC00520-204ENST00000556417 A0A1B0GV90 55 aa4.49□□□□□ -1.69
LINC00520-204ENST00000556417 MT2AP02795 61 aa4.49□□□□□ -1.69
LINC00520-204ENST00000556417 KRTAP16-1A8MUX0 517 aa4.48□□□□□ -1.69
LINC00520-204ENST00000556417 RBM3P98179 157 aaKnown RBP4.48□□□□□ -1.69
LINC00520-204ENST00000556417 DSCR8Q96T75 97 aa4.48□□□□□ -1.69
LINC00520-204ENST00000556417 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
LINC00520-204ENST00000556417 NOTCH2NLQ7Z3S9 236 aa4.47□□□□□ -1.69
LINC00520-204ENST00000556417 TSTD3H0UI37 97 aa4.46□□□□□ -1.7
LINC00520-204ENST00000556417 MT1FP04733 61 aa4.46□□□□□ -1.7
LINC00520-204ENST00000556417 BAALC-AS2P0C853 105 aa4.46□□□□□ -1.7
LINC00520-204ENST00000556417 MPLKIPQ8TAP9 179 aa4.46□□□□□ -1.7
LINC00520-204ENST00000556417 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
LINC00520-204ENST00000556417 LINC00472Q9H8W2 130 aa4.46□□□□□ -1.7
LINC00520-204ENST00000556417 C9JAW5 83 aa4.44□□□□□ -1.7
LINC00520-204ENST00000556417 NAA38Q9BRA0 125 aaKnown RBP4.44□□□□□ -1.7
LINC00520-204ENST00000556417 FAM236DA0A1B0GTK5 79 aa4.43□□□□□ -1.7
LINC00520-204ENST00000556417 FAM236CP0DP71 79 aa4.43□□□□□ -1.7
LINC00520-204ENST00000556417 M0R143 59 aa4.42□□□□□ -1.7
LINC00520-204ENST00000556417 HRES1P13985 223 aa4.42□□□□□ -1.7
LINC00520-204ENST00000556417 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
LINC00520-204ENST00000556417 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
LINC00520-204ENST00000556417 A0A1B0GVX0 72 aa4.41□□□□□ -1.7
LINC00520-204ENST00000556417 SCGB1A1P11684 91 aa4.41□□□□□ -1.7
LINC00520-204ENST00000556417 ATXN8Q156A1 80 aa4.41□□□□□ -1.7
LINC00520-204ENST00000556417 SMIM20Q8N5G0 67 aa4.41□□□□□ -1.7
LINC00520-204ENST00000556417 C8orf87E5RJ46 101 aa4.4□□□□□ -1.71
LINC00520-204ENST00000556417 Q6ZQT0 140 aa4.4□□□□□ -1.71
LINC00520-204ENST00000556417 RBM12B-AS1Q9P1G2 102 aa4.4□□□□□ -1.71
LINC00520-204ENST00000556417 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.71
LINC00520-204ENST00000556417 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
LINC00520-204ENST00000556417 J3KT08 172 aa4.39□□□□□ -1.71
LINC00520-204ENST00000556417 SMIM6P0DI80 62 aa4.39□□□□□ -1.71
LINC00520-204ENST00000556417 JMJD7-PLA2G4BH0Y9G9 81 aa4.38□□□□□ -1.71
LINC00520-204ENST00000556417 NDUFB1O75438 58 aa4.38□□□□□ -1.71
LINC00520-204ENST00000556417 BATFQ16520 125 aa4.37□□□□□ -1.71
LINC00520-204ENST00000556417 LYRM7Q5U5X0 104 aa4.37□□□□□ -1.71
LINC00520-204ENST00000556417 PRAC1Q96KF2 57 aa4.36□□□□□ -1.71
LINC00520-204ENST00000556417 C14orf132Q9NPU4 83 aa4.36□□□□□ -1.71
LINC00520-204ENST00000556417 PDE6GP18545 87 aa4.35□□□□□ -1.71
LINC00520-204ENST00000556417 ZCCHC13Q8WW36 166 aaKnown RBP4.35□□□□□ -1.71
LINC00520-204ENST00000556417 LOC110117498A0A087WWA1 95 aa4.34□□□□□ -1.71
LINC00520-204ENST00000556417 SPINK7P58062 85 aa4.34□□□□□ -1.71
LINC00520-204ENST00000556417 NREPQ16612 68 aa4.34□□□□□ -1.71
LINC00520-204ENST00000556417 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.71
LINC00520-204ENST00000556417 A8MWP4 228 aa4.33□□□□□ -1.72
LINC00520-204ENST00000556417 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
LINC00520-204ENST00000556417 IGKV3D-7A0A0C4DH55 119 aa4.32□□□□□ -1.72
LINC00520-204ENST00000556417 A0A1B0GW54 56 aa4.32□□□□□ -1.72
LINC00520-204ENST00000556417 NDUFS5O43920 106 aa4.31□□□□□ -1.72
LINC00520-204ENST00000556417 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
LINC00520-204ENST00000556417 LINC00846Q9NV44 126 aa4.31□□□□□ -1.72
LINC00520-204ENST00000556417 PRR15Q8IV56 129 aa4.3□□□□□ -1.72
LINC00520-204ENST00000556417 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
LINC00520-204ENST00000556417 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
LINC00520-204ENST00000556417 WFDC13Q8IUB5 93 aa4.27□□□□□ -1.73
LINC00520-204ENST00000556417 A0A1W2PPM0 123 aa4.26□□□□□ -1.73
LINC00520-204ENST00000556417 TAX1BP3O14907 124 aa4.26□□□□□ -1.73
LINC00520-204ENST00000556417 MRPL34Q9BQ48 92 aaKnown RBP4.26□□□□□ -1.73
LINC00520-204ENST00000556417 OCR1Q9BZK8 76 aa4.26□□□□□ -1.73
LINC00520-204ENST00000556417 MMP24-AS1A0A0U1RRL7 71 aa4.25□□□□□ -1.73
LINC00520-204ENST00000556417 hDV103S1A0JD37 113 aa4.25□□□□□ -1.73
LINC00520-204ENST00000556417 H3BT86 120 aa4.25□□□□□ -1.73
LINC00520-204ENST00000556417 K7EQZ3 153 aa4.25□□□□□ -1.73
LINC00520-204ENST00000556417 BPY2O14599 106 aa4.25□□□□□ -1.73
LINC00520-204ENST00000556417 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
LINC00520-204ENST00000556417 TMEM254Q8TBM7 123 aa4.25□□□□□ -1.73
LINC00520-204ENST00000556417 PSPHP1O15172 72 aa4.21□□□□□ -1.74
LINC00520-204ENST00000556417 SPCS1Q9Y6A9 102 aa4.21□□□□□ -1.74
LINC00520-204ENST00000556417 IGKV2D-30A0A075B6S6 120 aa4.2□□□□□ -1.74
LINC00520-204ENST00000556417 IGKV2-30P06310 120 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms