RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FAM168BA1KXE4 195 aa2.78□□□□□ -1.96
ATXN3-241ENST00000556374 EPM2AB3EWF7 344 aa2.78□□□□□ -1.96
ATXN3-241ENST00000556374 ST20-AS1Q8NBB2 130 aa2.78□□□□□ -1.96
ATXN3-241ENST00000556374 Q9BRP9 147 aa2.78□□□□□ -1.96
ATXN3-241ENST00000556374 HIGD2AQ9BW72 106 aa2.78□□□□□ -1.96
ATXN3-241ENST00000556374 PRO0628Q9UI54 55 aa2.78□□□□□ -1.96
ATXN3-241ENST00000556374 HSPG2P98160 4391 aa2.78□□□□□ -1.96
ATXN3-241ENST00000556374 IGKV2-24A0A0C4DH68 120 aa2.77□□□□□ -1.97
ATXN3-241ENST00000556374 C16orf90A8MZG2 172 aa2.77□□□□□ -1.97
ATXN3-241ENST00000556374 KRTAP4-16G5E9R7 235 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-241ENST00000556374 K7EQZ3 153 aa2.77□□□□□ -1.97
ATXN3-241ENST00000556374 LY6G6CO95867 125 aa2.77□□□□□ -1.97
ATXN3-241ENST00000556374 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
ATXN3-241ENST00000556374 DNAH6Q9C0G6 4158 aa2.76□□□□□ -1.97
ATXN3-241ENST00000556374 H3BPC8 53 aa2.76□□□□□ -1.97
ATXN3-241ENST00000556374 IGFL1Q6UW32 110 aa2.76□□□□□ -1.97
ATXN3-241ENST00000556374 LINC00474Q9P2X8 69 aa2.76□□□□□ -1.97
ATXN3-241ENST00000556374 V9GYY9 64 aa2.76□□□□□ -1.97
ATXN3-241ENST00000556374 FAT2Q9NYQ8 4349 aa2.75□□□□□ -1.97
ATXN3-241ENST00000556374 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.75□□□□□ -1.97
ATXN3-241ENST00000556374 A0A087WSZ3 146 aa2.75□□□□□ -1.97
ATXN3-241ENST00000556374 A0A096LNI7 61 aa2.75□□□□□ -1.97
ATXN3-241ENST00000556374 hDV103S1A0JD37 113 aa2.75□□□□□ -1.97
ATXN3-241ENST00000556374 CNBPP62633 177 aaKnown RBP2.75□□□□□ -1.97
ATXN3-241ENST00000556374 PRLHP81277 87 aa2.75□□□□□ -1.97
ATXN3-241ENST00000556374 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
ATXN3-241ENST00000556374 WFDC13Q8IUB5 93 aa2.75□□□□□ -1.97
ATXN3-241ENST00000556374 BRK1Q8WUW1 75 aa2.75□□□□□ -1.97
ATXN3-241ENST00000556374 IGLV8-61A0A075B6I0 122 aa2.74□□□□□ -1.97
ATXN3-241ENST00000556374 H0Y9P7 68 aa2.74□□□□□ -1.97
ATXN3-241ENST00000556374 DSCR10P59022 87 aa2.74□□□□□ -1.97
ATXN3-241ENST00000556374 CASC2Q6XLA1 102 aa2.74□□□□□ -1.97
ATXN3-241ENST00000556374 FP248Q71RG6 208 aaPredicted RBP2.74□□□□□ -1.97
ATXN3-241ENST00000556374 NOTCH2NLQ7Z3S9 236 aa2.74□□□□□ -1.97
ATXN3-241ENST00000556374 ZNF706Q9Y5V0 76 aaPredicted RBP2.74□□□□□ -1.97
ATXN3-241ENST00000556374 VPS13DQ5THJ4 4388 aa2.73□□□□□ -1.97
ATXN3-241ENST00000556374 NUPR2A6NF83 97 aa2.73□□□□□ -1.97
ATXN3-241ENST00000556374 H0Y9J4 135 aa2.73□□□□□ -1.97
ATXN3-241ENST00000556374 CDK2AP2O75956 126 aa2.73□□□□□ -1.97
ATXN3-241ENST00000556374 CYP4F30PQ9H0H9 118 aa2.73□□□□□ -1.97
ATXN3-241ENST00000556374 DNAH2Q9P225 4427 aa2.73□□□□□ -1.97
ATXN3-241ENST00000556374 A8MWP4 228 aa2.72□□□□□ -1.97
ATXN3-241ENST00000556374 SPRR1BP22528 89 aa2.72□□□□□ -1.97
ATXN3-241ENST00000556374 LINC00336Q6ZUF6 198 aa2.72□□□□□ -1.97
ATXN3-241ENST00000556374 PHF5AQ7RTV0 110 aaKnown RBP2.72□□□□□ -1.97
ATXN3-241ENST00000556374 TRAV22A0A0B4J277 110 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 A0A1W2PNN7 141 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 KRTAP16-1A8MUX0 517 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 MOBPQ13875 183 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 DEFB116Q30KQ4 102 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 FAM229BQ4G0N7 80 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 SPANXA2-OT1Q8N9U9 137 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 C1orf64Q8NEQ6 169 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 ZCCHC13Q8WW36 166 aaKnown RBP2.71□□□□□ -1.98
ATXN3-241ENST00000556374 LINC00208Q96KT6 92 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 DNAH17Q9UFH2 4485 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 HMCN2Q8NDA2 5059 aa2.71□□□□□ -1.98
ATXN3-241ENST00000556374 CHTF8P0CG12 524 aa2.7□□□□□ -1.98
ATXN3-241ENST00000556374 RPL37AP61513 92 aaKnown RBP2.7□□□□□ -1.98
ATXN3-241ENST00000556374 PRR4Q16378 134 aa2.7□□□□□ -1.98
ATXN3-241ENST00000556374 Q1T7F1 81 aa2.7□□□□□ -1.98
ATXN3-241ENST00000556374 C1orf195Q5TG92 126 aa2.7□□□□□ -1.98
ATXN3-241ENST00000556374 PRR15Q8IV56 129 aa2.7□□□□□ -1.98
ATXN3-241ENST00000556374 TP53AIP1Q9HCN2 124 aa2.7□□□□□ -1.98
ATXN3-241ENST00000556374 PKD1P98161 4303 aa2.69□□□□□ -1.98
ATXN3-241ENST00000556374 IGLV9-49A0A0B4J1Y8 123 aa2.69□□□□□ -1.98
ATXN3-241ENST00000556374 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
ATXN3-241ENST00000556374 C9orf163Q8N9P6 203 aa2.69□□□□□ -1.98
ATXN3-241ENST00000556374 APLNQ9ULZ1 77 aa2.69□□□□□ -1.98
ATXN3-241ENST00000556374 MYCBP2O75592 4640 aa2.69□□□□□ -1.98
ATXN3-241ENST00000556374 APOBP04114 4563 aaKnown RBP2.69□□□□□ -1.98
ATXN3-241ENST00000556374 A0A0G2JQZ4 141 aa2.68□□□□□ -1.98
ATXN3-241ENST00000556374 NBDYA0A0U1RRE5 68 aa2.68□□□□□ -1.98
ATXN3-241ENST00000556374 NDUFS5O43920 106 aa2.68□□□□□ -1.98
ATXN3-241ENST00000556374 LIMD2Q9BT23 127 aa2.68□□□□□ -1.98
ATXN3-241ENST00000556374 MMP24-AS1A0A0U1RRL7 71 aa2.67□□□□□ -1.98
ATXN3-241ENST00000556374 SPACA4Q8TDM5 124 aa2.67□□□□□ -1.98
ATXN3-241ENST00000556374 LINC00472Q9H8W2 130 aa2.67□□□□□ -1.98
ATXN3-241ENST00000556374 LRP1BQ9NZR2 4599 aa2.67□□□□□ -1.98
ATXN3-241ENST00000556374 A0A1B0GVX0 72 aa2.66□□□□□ -1.98
ATXN3-241ENST00000556374 LRCOL1A6NCL2 159 aa2.66□□□□□ -1.98
ATXN3-241ENST00000556374 PSPHP1O15172 72 aa2.66□□□□□ -1.98
ATXN3-241ENST00000556374 PRR15LQ9BU68 103 aa2.66□□□□□ -1.98
ATXN3-241ENST00000556374 C8orf17Q9NRJ1 99 aa2.66□□□□□ -1.98
ATXN3-241ENST00000556374 RNF213Q63HN8 5207 aa2.65□□□□□ -1.98
ATXN3-241ENST00000556374 FLG2Q5D862 2391 aaPredicted RBP2.65□□□□□ -1.98
ATXN3-241ENST00000556374 IGHV6-1A0A0B4J1U7 121 aa2.65□□□□□ -1.99
ATXN3-241ENST00000556374 RTL8CO15255 209 aa2.65□□□□□ -1.99
ATXN3-241ENST00000556374 LINC00483Q53H64 154 aa2.65□□□□□ -1.99
ATXN3-241ENST00000556374 A0A087X002 238 aa2.64□□□□□ -1.99
ATXN3-241ENST00000556374 LOC101927531A0A1B0GV80 90 aa2.64□□□□□ -1.99
ATXN3-241ENST00000556374 CHKB-CPT1BH3BT56 60 aa2.64□□□□□ -1.99
ATXN3-241ENST00000556374 SEC61GP60059 68 aa2.64□□□□□ -1.99
ATXN3-241ENST00000556374 PCOTHQ58A44 107 aa2.64□□□□□ -1.99
ATXN3-241ENST00000556374 COA5Q86WW8 74 aa2.64□□□□□ -1.99
ATXN3-241ENST00000556374 KRTAP13-1Q8IUC0 172 aa2.64□□□□□ -1.99
ATXN3-241ENST00000556374 MRPL34Q9BQ48 92 aaKnown RBP2.64□□□□□ -1.99
ATXN3-241ENST00000556374 IGLV7-46A0A075B6I9 117 aa2.63□□□□□ -1.99
ATXN3-241ENST00000556374 A0A087WTM6 91 aa2.63□□□□□ -1.99
ATXN3-241ENST00000556374 A6NED7 52 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms