RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 BPY2O14599 106 aa11.34□□□□□ -0.59
FOXN3-209ENST00000555353 NDUFB1O75438 58 aa11.29□□□□□ -0.6
FOXN3-209ENST00000555353 C9orf92A6NGG3 77 aa11.28□□□□□ -0.6
FOXN3-209ENST00000555353 XP32Q5T750 250 aa11.27□□□□□ -0.61
FOXN3-209ENST00000555353 LINC00643Q86TS7 51 aa11.27□□□□□ -0.61
FOXN3-209ENST00000555353 A8MWP4 228 aa11.26□□□□□ -0.61
FOXN3-209ENST00000555353 ATP5EP2Q5VTU8 51 aa11.26□□□□□ -0.61
FOXN3-209ENST00000555353 CXCL6P80162 114 aa11.25□□□□□ -0.61
FOXN3-209ENST00000555353 SEC61BP60468 96 aaKnown RBP11.23□□□□□ -0.61
FOXN3-209ENST00000555353 DSCR10P59022 87 aa11.22□□□□□ -0.61
FOXN3-209ENST00000555353 A0A1B0GVX0 72 aa11.21□□□□□ -0.61
FOXN3-209ENST00000555353 IGHV6-1A0A0B4J1U7 121 aa11.2□□□□□ -0.62
FOXN3-209ENST00000555353 IGKV3D-7A0A0C4DH55 119 aa11.19□□□□□ -0.62
FOXN3-209ENST00000555353 MUC17Q685J3 4493 aa11.18□□□□□ -0.62
FOXN3-209ENST00000555353 PRR15Q8IV56 129 aa11.18□□□□□ -0.62
FOXN3-209ENST00000555353 MUC2Q02817 5179 aa11.18□□□□□ -0.62
FOXN3-209ENST00000555353 C8orf87E5RJ46 101 aa11.16□□□□□ -0.62
FOXN3-209ENST00000555353 K7EQZ3 153 aa11.16□□□□□ -0.62
FOXN3-209ENST00000555353 LINC00313P59037 77 aa11.14□□□□□ -0.63
FOXN3-209ENST00000555353 Q8N9L7 120 aa11.13□□□□□ -0.63
FOXN3-209ENST00000555353 A0A0U1RQV1 116 aa11.11□□□□□ -0.63
FOXN3-209ENST00000555353 C8orf17Q9NRJ1 99 aa11.1□□□□□ -0.63
FOXN3-209ENST00000555353 HIST1H4AP62805 103 aaKnown RBP11.09□□□□□ -0.63
FOXN3-209ENST00000555353 PCOTHQ58A44 107 aa11.06□□□□□ -0.64
FOXN3-209ENST00000555353 RPL37P61927 97 aaKnown RBP11.04□□□□□ -0.64
FOXN3-209ENST00000555353 NOTCH2NLQ7Z3S9 236 aa11.04□□□□□ -0.64
FOXN3-209ENST00000555353 MMP24-AS1A0A0U1RRL7 71 aa11.03□□□□□ -0.64
FOXN3-209ENST00000555353 HCG22E2RYF7 251 aa11.03□□□□□ -0.64
FOXN3-209ENST00000555353 hDV103S1A0JD37 113 aa11.02□□□□□ -0.65
FOXN3-209ENST00000555353 MT-ATP8P03928 68 aa11.01□□□□□ -0.65
FOXN3-209ENST00000555353 CASC2Q6XLA1 102 aa11.01□□□□□ -0.65
FOXN3-209ENST00000555353 IMUPQ9GZP8 106 aa11.01□□□□□ -0.65
FOXN3-209ENST00000555353 KRTAP4-1Q9BYQ7 146 aa11□□□□□ -0.65
FOXN3-209ENST00000555353 WFDC13Q8IUB5 93 aa10.99□□□□□ -0.65
FOXN3-209ENST00000555353 TMEM254Q8TBM7 123 aa10.99□□□□□ -0.65
FOXN3-209ENST00000555353 KRTAP16-1A8MUX0 517 aa10.98□□□□□ -0.65
FOXN3-209ENST00000555353 MRPL34Q9BQ48 92 aaKnown RBP10.97□□□□□ -0.65
FOXN3-209ENST00000555353 Q75L30 129 aa10.95□□□□□ -0.66
FOXN3-209ENST00000555353 A0A087WVE0 104 aa10.94□□□□□ -0.66
FOXN3-209ENST00000555353 C20orf166-AS1Q96NR2 134 aa10.93□□□□□ -0.66
FOXN3-209ENST00000555353 ATP11AUNQ6ZP68 121 aa10.91□□□□□ -0.66
FOXN3-209ENST00000555353 A8MUU9 505 aa10.9□□□□□ -0.66
FOXN3-209ENST00000555353 Q8N9P0 234 aaPredicted RBP10.9□□□□□ -0.66
FOXN3-209ENST00000555353 NDUFS5O43920 106 aa10.89□□□□□ -0.67
FOXN3-209ENST00000555353 FAT4Q6V0I7 4981 aa10.87□□□□□ -0.67
FOXN3-209ENST00000555353 SCGB1A1P11684 91 aa10.81□□□□□ -0.68
FOXN3-209ENST00000555353 TP53AIP1Q9HCN2 124 aa10.8□□□□□ -0.68
FOXN3-209ENST00000555353 FAM236AA0A1B0GUQ0 79 aa10.77□□□□□ -0.68
FOXN3-209ENST00000555353 FAM236BA0A1B0GV22 79 aa10.77□□□□□ -0.68
FOXN3-209ENST00000555353 ZCCHC13Q8WW36 166 aaKnown RBP10.75□□□□□ -0.69
FOXN3-209ENST00000555353 LCE2AQ5TA79 106 aaPredicted RBP10.74□□□□□ -0.69
FOXN3-209ENST00000555353 UQCRQO14949 82 aa10.69□□□□□ -0.7
FOXN3-209ENST00000555353 SMIM20Q8N5G0 67 aa10.68□□□□□ -0.7
FOXN3-209ENST00000555353 ATOX1O00244 68 aa10.67□□□□□ -0.7
FOXN3-209ENST00000555353 KRTAP19-2Q3LHN2 52 aa10.67□□□□□ -0.7
FOXN3-209ENST00000555353 OCR1Q9BZK8 76 aa10.66□□□□□ -0.7
FOXN3-209ENST00000555353 LCE2CQ5TA81 110 aa10.65□□□□□ -0.71
FOXN3-209ENST00000555353 COX6B2Q6YFQ2 88 aa10.64□□□□□ -0.71
FOXN3-209ENST00000555353 Q5W150 140 aa10.63□□□□□ -0.71
FOXN3-209ENST00000555353 TRAV22A0A0B4J277 110 aa10.62□□□□□ -0.71
FOXN3-209ENST00000555353 TRAV7A0A075B6U4 112 aa10.59□□□□□ -0.71
FOXN3-209ENST00000555353 C5orf47Q569G3 176 aa10.57□□□□□ -0.72
FOXN3-209ENST00000555353 H0Y9P7 68 aa10.56□□□□□ -0.72
FOXN3-209ENST00000555353 MP68P56378 58 aa10.56□□□□□ -0.72
FOXN3-209ENST00000555353 MT1HP80294 61 aa10.52□□□□□ -0.72
FOXN3-209ENST00000555353 SPINK7P58062 85 aa10.52□□□□□ -0.73
FOXN3-209ENST00000555353 C7orf65Q6ZTY9 151 aa10.52□□□□□ -0.73
FOXN3-209ENST00000555353 IGKV2D-30A0A075B6S6 120 aa10.51□□□□□ -0.73
FOXN3-209ENST00000555353 IGKV2-30P06310 120 aa10.51□□□□□ -0.73
FOXN3-209ENST00000555353 SERP2Q8N6R1 65 aa10.51□□□□□ -0.73
FOXN3-209ENST00000555353 LOC101927531A0A1B0GV80 90 aa10.49□□□□□ -0.73
FOXN3-209ENST00000555353 H3BPC8 53 aa10.49□□□□□ -0.73
FOXN3-209ENST00000555353 LINC00208Q96KT6 92 aa10.46□□□□□ -0.74
FOXN3-209ENST00000555353 C1orf64Q8NEQ6 169 aa10.45□□□□□ -0.74
FOXN3-209ENST00000555353 ANAPC13Q9BS18 74 aa10.43□□□□□ -0.74
FOXN3-209ENST00000555353 M0R2T5 61 aa10.43□□□□□ -0.74
FOXN3-209ENST00000555353 RBM12B-AS1Q9P1G2 102 aa10.42□□□□□ -0.74
FOXN3-209ENST00000555353 HRES1P13985 223 aa10.41□□□□□ -0.74
FOXN3-209ENST00000555353 FAM236DA0A1B0GTK5 79 aa10.4□□□□□ -0.74
FOXN3-209ENST00000555353 FAM236CP0DP71 79 aa10.4□□□□□ -0.74
FOXN3-209ENST00000555353 CYP4F30PQ9H0H9 118 aa10.4□□□□□ -0.74
FOXN3-209ENST00000555353 COX7CP15954 63 aa10.39□□□□□ -0.75
FOXN3-209ENST00000555353 MPLKIPQ8TAP9 179 aa10.36□□□□□ -0.75
FOXN3-209ENST00000555353 FLGP20930 4061 aaPredicted RBP10.34□□□□□ -0.75
FOXN3-209ENST00000555353 C20orf197Q8N268 126 aa10.33□□□□□ -0.76
FOXN3-209ENST00000555353 KRTAP10-6P60371 365 aaPredicted RBP10.28□□□□□ -0.76
FOXN3-209ENST00000555353 SNURFQ9Y675 71 aa10.28□□□□□ -0.76
FOXN3-209ENST00000555353 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
FOXN3-209ENST00000555353 KLKP1Q107X0 134 aa10.25□□□□□ -0.77
FOXN3-209ENST00000555353 C4orf26Q17RF5 130 aa10.23□□□□□ -0.77
FOXN3-209ENST00000555353 KRTAP9-2Q9BYQ4 174 aa10.22□□□□□ -0.77
FOXN3-209ENST00000555353 NDUFC1O43677 76 aa10.16□□□□□ -0.78
FOXN3-209ENST00000555353 CCDC179H3BU77 68 aa10.14□□□□□ -0.79
FOXN3-209ENST00000555353 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
FOXN3-209ENST00000555353 A8MUN3 132 aa10.07□□□□□ -0.8
FOXN3-209ENST00000555353 H1FX-AS1Q4G0G2 97 aa10.07□□□□□ -0.8
FOXN3-209ENST00000555353 SPANXA2-OT1Q8N9U9 137 aa10.06□□□□□ -0.8
FOXN3-209ENST00000555353 H7BZZ5 65 aa10.03□□□□□ -0.8
FOXN3-209ENST00000555353 KRTAP3-1Q9BYR8 98 aa10.03□□□□□ -0.8
FOXN3-209ENST00000555353 CYSTM1Q9H1C7 97 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms