RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 SNHG12Q9BXW3 62 aa6.32□□□□□ -1.4
TMEM253-205ENST00000555314 DNAL4O96015 105 aa6.31□□□□□ -1.4
TMEM253-205ENST00000555314 TRACP01848 142 aa6.31□□□□□ -1.4
TMEM253-205ENST00000555314 SS18L2Q9UHA2 77 aa6.31□□□□□ -1.4
TMEM253-205ENST00000555314 TAX1BP3O14907 124 aa6.3□□□□□ -1.4
TMEM253-205ENST00000555314 NDUFV3P56181 108 aaKnown RBP6.3□□□□□ -1.4
TMEM253-205ENST00000555314 KRTAP9-3Q9BYQ3 159 aa6.3□□□□□ -1.4
TMEM253-205ENST00000555314 ORMDL1Q9P0S3 153 aa6.3□□□□□ -1.4
TMEM253-205ENST00000555314 FABP2P12104 132 aa6.29□□□□□ -1.4
TMEM253-205ENST00000555314 MT1FP04733 61 aa6.27□□□□□ -1.41
TMEM253-205ENST00000555314 LINC00846Q9NV44 126 aa6.27□□□□□ -1.41
TMEM253-205ENST00000555314 ATXN8Q156A1 80 aa6.26□□□□□ -1.41
TMEM253-205ENST00000555314 H3BMG7 143 aa6.25□□□□□ -1.41
TMEM253-205ENST00000555314 H3BQ85 93 aa6.25□□□□□ -1.41
TMEM253-205ENST00000555314 TMEM256-PLSCR3K7ERE1 68 aa6.25□□□□□ -1.41
TMEM253-205ENST00000555314 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
TMEM253-205ENST00000555314 LYRM7Q5U5X0 104 aa6.25□□□□□ -1.41
TMEM253-205ENST00000555314 A0A1W2PPM0 123 aa6.24□□□□□ -1.41
TMEM253-205ENST00000555314 COL5A1-AS1Q5SY13 56 aa6.24□□□□□ -1.41
TMEM253-205ENST00000555314 TEN1Q86WV5 123 aa6.24□□□□□ -1.41
TMEM253-205ENST00000555314 BAALC-AS2P0C853 105 aa6.23□□□□□ -1.41
TMEM253-205ENST00000555314 FAM236DA0A1B0GTK5 79 aa6.22□□□□□ -1.41
TMEM253-205ENST00000555314 FAM236CP0DP71 79 aa6.22□□□□□ -1.41
TMEM253-205ENST00000555314 RBM12B-AS1Q9P1G2 102 aa6.22□□□□□ -1.41
TMEM253-205ENST00000555314 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
TMEM253-205ENST00000555314 ANKRD29Q8N6D5 301 aa6.21□□□□□ -1.42
TMEM253-205ENST00000555314 A0A087WSZ3 146 aa6.2□□□□□ -1.42
TMEM253-205ENST00000555314 A0A1W2PNM2 257 aa6.19□□□□□ -1.42
TMEM253-205ENST00000555314 C9JAW5 83 aa6.19□□□□□ -1.42
TMEM253-205ENST00000555314 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
TMEM253-205ENST00000555314 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
TMEM253-205ENST00000555314 TRBV7-4A0A0J9YYF1 115 aa6.17□□□□□ -1.42
TMEM253-205ENST00000555314 HRES1P13985 223 aa6.17□□□□□ -1.42
TMEM253-205ENST00000555314 SPCS1Q9Y6A9 102 aa6.17□□□□□ -1.42
TMEM253-205ENST00000555314 A0A1B0GV90 55 aa6.16□□□□□ -1.42
TMEM253-205ENST00000555314 DSCR10P59022 87 aa6.16□□□□□ -1.42
TMEM253-205ENST00000555314 LINC00313P59037 77 aa6.16□□□□□ -1.42
TMEM253-205ENST00000555314 RBM3P98179 157 aaKnown RBP6.16□□□□□ -1.42
TMEM253-205ENST00000555314 MTURNQ8N3F0 131 aa6.16□□□□□ -1.42
TMEM253-205ENST00000555314 DEFB116Q30KQ4 102 aa6.15□□□□□ -1.42
TMEM253-205ENST00000555314 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.43
TMEM253-205ENST00000555314 CCKP06307 115 aa6.14□□□□□ -1.43
TMEM253-205ENST00000555314 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
TMEM253-205ENST00000555314 H3BT86 120 aa6.13□□□□□ -1.43
TMEM253-205ENST00000555314 DSCR8Q96T75 97 aa6.13□□□□□ -1.43
TMEM253-205ENST00000555314 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
TMEM253-205ENST00000555314 JMJD7-PLA2G4BH0Y9G9 81 aa6.12□□□□□ -1.43
TMEM253-205ENST00000555314 K7EP34 96 aa6.12□□□□□ -1.43
TMEM253-205ENST00000555314 SIGMAR1Q99720 223 aa6.12□□□□□ -1.43
TMEM253-205ENST00000555314 VPS25Q9BRG1 176 aa6.12□□□□□ -1.43
TMEM253-205ENST00000555314 LOC110117498A0A087WWA1 95 aa6.1□□□□□ -1.43
TMEM253-205ENST00000555314 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
TMEM253-205ENST00000555314 Q6ZQT0 140 aa6.1□□□□□ -1.43
TMEM253-205ENST00000555314 C14orf132Q9NPU4 83 aa6.1□□□□□ -1.43
TMEM253-205ENST00000555314 PRO0461Q9UI25 63 aa6.09□□□□□ -1.43
TMEM253-205ENST00000555314 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
TMEM253-205ENST00000555314 IGKV4-1P06312 121 aa6.07□□□□□ -1.44
TMEM253-205ENST00000555314 PDE6GP18545 87 aa6.07□□□□□ -1.44
TMEM253-205ENST00000555314 KRTAP9-9Q9BYP9 154 aa6.07□□□□□ -1.44
TMEM253-205ENST00000555314 SEC61GP60059 68 aa6.06□□□□□ -1.44
TMEM253-205ENST00000555314 A8MWP4 228 aa6.05□□□□□ -1.44
TMEM253-205ENST00000555314 GTF2H5Q6ZYL4 71 aa6.05□□□□□ -1.44
TMEM253-205ENST00000555314 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
TMEM253-205ENST00000555314 LINC00472Q9H8W2 130 aa6.04□□□□□ -1.44
TMEM253-205ENST00000555314 A0A1B0GW54 56 aa6.02□□□□□ -1.45
TMEM253-205ENST00000555314 IGHV6-1A0A0B4J1U7 121 aa6.01□□□□□ -1.45
TMEM253-205ENST00000555314 C8orf87E5RJ46 101 aa6.01□□□□□ -1.45
TMEM253-205ENST00000555314 C5orf47Q569G3 176 aa6□□□□□ -1.45
TMEM253-205ENST00000555314 F8W1H4 67 aa5.99□□□□□ -1.45
TMEM253-205ENST00000555314 SPINK7P58062 85 aa5.99□□□□□ -1.45
TMEM253-205ENST00000555314 ZCCHC13Q8WW36 166 aaKnown RBP5.99□□□□□ -1.45
TMEM253-205ENST00000555314 ETDBQ3ZM63 59 aa5.96□□□□□ -1.46
TMEM253-205ENST00000555314 A0A1B0GVX0 72 aa5.95□□□□□ -1.46
TMEM253-205ENST00000555314 J3KT08 172 aa5.95□□□□□ -1.46
TMEM253-205ENST00000555314 NREPQ16612 68 aa5.94□□□□□ -1.46
TMEM253-205ENST00000555314 Q8N9P0 234 aaPredicted RBP5.93□□□□□ -1.46
TMEM253-205ENST00000555314 WFDC13Q8IUB5 93 aa5.91□□□□□ -1.46
TMEM253-205ENST00000555314 Q6ZVQ6 151 aa5.9□□□□□ -1.46
TMEM253-205ENST00000555314 IGKV3D-7A0A0C4DH55 119 aa5.89□□□□□ -1.47
TMEM253-205ENST00000555314 NDUFB1O75438 58 aa5.88□□□□□ -1.47
TMEM253-205ENST00000555314 BPY2O14599 106 aa5.86□□□□□ -1.47
TMEM253-205ENST00000555314 LCE5AQ5TCM9 118 aa5.86□□□□□ -1.47
TMEM253-205ENST00000555314 PRR15Q8IV56 129 aa5.86□□□□□ -1.47
TMEM253-205ENST00000555314 K7EQZ3 153 aa5.85□□□□□ -1.47
TMEM253-205ENST00000555314 C8orf17Q9NRJ1 99 aa5.85□□□□□ -1.47
TMEM253-205ENST00000555314 H1FX-AS1Q4G0G2 97 aa5.84□□□□□ -1.47
TMEM253-205ENST00000555314 UBL5Q9BZL1 73 aa5.84□□□□□ -1.47
TMEM253-205ENST00000555314 Q8N9L7 120 aa5.82□□□□□ -1.48
TMEM253-205ENST00000555314 MMP24-AS1A0A0U1RRL7 71 aa5.81□□□□□ -1.48
TMEM253-205ENST00000555314 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
TMEM253-205ENST00000555314 NEBP20929 6669 aa5.8□□□□□ -1.48
TMEM253-205ENST00000555314 IGKV2D-30A0A075B6S6 120 aa5.8□□□□□ -1.48
TMEM253-205ENST00000555314 FAM240AA0A1B0GVK7 77 aa5.79□□□□□ -1.48
TMEM253-205ENST00000555314 K7ERU9 68 aa5.79□□□□□ -1.48
TMEM253-205ENST00000555314 ACYP1P07311 99 aa5.78□□□□□ -1.48
TMEM253-205ENST00000555314 V9GYY9 64 aa5.78□□□□□ -1.48
TMEM253-205ENST00000555314 KRTAP20-1Q3LI63 56 aa5.77□□□□□ -1.49
TMEM253-205ENST00000555314 TMEM254Q8TBM7 123 aa5.77□□□□□ -1.49
TMEM253-205ENST00000555314 hDV103S1A0JD37 113 aa5.76□□□□□ -1.49
TMEM253-205ENST00000555314 A6NN06 94 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms