RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-208ENST00000555240 PKD1P98161 4303 aa0.61□□□□□ -2.31
CASC1-208ENST00000555240 A8MTW9 85 aa0.61□□□□□ -2.31
CASC1-208ENST00000555240 H0YGG7 62 aa0.61□□□□□ -2.31
CASC1-208ENST00000555240 CEP290O15078 2479 aa0.61□□□□□ -2.31
CASC1-208ENST00000555240 DNAH2Q9P225 4427 aa0.6□□□□□ -2.31
CASC1-208ENST00000555240 TTTY10Q9BZA0 68 aa0.6□□□□□ -2.31
CASC1-208ENST00000555240 U3KQA8 63 aa0.6□□□□□ -2.31
CASC1-208ENST00000555240 PIEZO1Q92508 2521 aa0.6□□□□□ -2.31
CASC1-208ENST00000555240 PKHD1L1Q86WI1 4243 aa0.59□□□□□ -2.31
CASC1-208ENST00000555240 M0QY20 66 aa0.59□□□□□ -2.31
CASC1-208ENST00000555240 DYNC2H1Q8NCM8 4307 aaKnown RBP0.58□□□□□ -2.32
CASC1-208ENST00000555240 COL6A5A8TX70 2615 aa0.58□□□□□ -2.32
CASC1-208ENST00000555240 LRP1Q07954 4544 aaKnown RBP0.58□□□□□ -2.32
CASC1-208ENST00000555240 HSPG2P98160 4391 aa0.58□□□□□ -2.32
CASC1-208ENST00000555240 TENM2Q9NT68 2774 aa0.58□□□□□ -2.32
CASC1-208ENST00000555240 SPTA1P02549 2419 aa0.57□□□□□ -2.32
CASC1-208ENST00000555240 SPENQ96T58 3664 aaKnown RBP0.57□□□□□ -2.32
CASC1-208ENST00000555240 HECTD4Q9Y4D8 3996 aa0.56□□□□□ -2.32
CASC1-208ENST00000555240 DEFB104AQ8WTQ1 72 aa0.56□□□□□ -2.32
CASC1-208ENST00000555240 FSIP2Q5CZC0 6907 aa0.56□□□□□ -2.32
CASC1-208ENST00000555240 NBASA2RRP1 2371 aa0.56□□□□□ -2.32
CASC1-208ENST00000555240 TENM3Q9P273 2699 aa0.56□□□□□ -2.32
CASC1-208ENST00000555240 ANK3Q12955 4377 aaKnown RBP0.56□□□□□ -2.32
CASC1-208ENST00000555240 PKD1L2Q7Z442 2459 aa0.56□□□□□ -2.32
CASC1-208ENST00000555240 DNAH3Q8TD57 4116 aa0.56□□□□□ -2.32
CASC1-208ENST00000555240 HECTD1Q9ULT8 2610 aa0.55□□□□□ -2.32
CASC1-208ENST00000555240 DNAH8Q96JB1 4490 aa0.55□□□□□ -2.32
CASC1-208ENST00000555240 FLNCQ14315 2725 aa0.55□□□□□ -2.32
CASC1-208ENST00000555240 ZZEF1O43149 2961 aa0.54□□□□□ -2.32
CASC1-208ENST00000555240 H3BSH0 61 aa0.54□□□□□ -2.32
CASC1-208ENST00000555240 TOMM7Q9P0U1 55 aa0.54□□□□□ -2.32
CASC1-208ENST00000555240 COL7A1Q02388 2944 aa0.53□□□□□ -2.32
CASC1-208ENST00000555240 DMXL1Q9Y485 3027 aa0.53□□□□□ -2.32
CASC1-208ENST00000555240 UNC79Q9P2D8 2635 aa0.53□□□□□ -2.32
CASC1-208ENST00000555240 NF1P21359 2839 aa0.53□□□□□ -2.32
CASC1-208ENST00000555240 DCHS2Q6V1P9 2916 aa0.53□□□□□ -2.32
CASC1-208ENST00000555240 DNAH7Q8WXX0 4024 aa0.53□□□□□ -2.33
CASC1-208ENST00000555240 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
CASC1-208ENST00000555240 H3BNG1 76 aa0.52□□□□□ -2.33
CASC1-208ENST00000555240 GCN1Q92616 2671 aaKnown RBP0.52□□□□□ -2.33
CASC1-208ENST00000555240 DNAH6Q9C0G6 4158 aa0.52□□□□□ -2.33
CASC1-208ENST00000555240 LPAP08519 4548 aa0.52□□□□□ -2.33
CASC1-208ENST00000555240 APOBP04114 4563 aaKnown RBP0.52□□□□□ -2.33
CASC1-208ENST00000555240 NBPF19A0A087WUL8 3843 aa0.52□□□□□ -2.33
CASC1-208ENST00000555240 WNK1Q9H4A3 2382 aa0.52□□□□□ -2.33
CASC1-208ENST00000555240 CHD8Q9HCK8 2581 aa0.51□□□□□ -2.33
CASC1-208ENST00000555240 TACC2O95359 2948 aa0.51□□□□□ -2.33
CASC1-208ENST00000555240 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
CASC1-208ENST00000555240 LINC01590Q5TEZ4 76 aa0.51□□□□□ -2.33
CASC1-208ENST00000555240 NAV2Q8IVL1 2488 aa0.51□□□□□ -2.33
CASC1-208ENST00000555240 FRYQ5TBA9 3013 aa0.51□□□□□ -2.33
CASC1-208ENST00000555240 SETXQ7Z333 2677 aaKnown RBP0.5□□□□□ -2.33
CASC1-208ENST00000555240 M0QZ58 72 aa0.5□□□□□ -2.33
CASC1-208ENST00000555240 NSD1Q96L73 2696 aaPredicted RBP0.5□□□□□ -2.33
CASC1-208ENST00000555240 ACACAQ13085 2346 aa0.49□□□□□ -2.33
CASC1-208ENST00000555240 DNAH9Q9NYC9 4486 aa0.49□□□□□ -2.33
CASC1-208ENST00000555240 ACANP16112 2415 aa0.49□□□□□ -2.33
CASC1-208ENST00000555240 KALRNO60229 2985 aa0.49□□□□□ -2.33
CASC1-208ENST00000555240 DNAH1Q9P2D7 4330 aa0.49□□□□□ -2.33
CASC1-208ENST00000555240 CUBNO60494 3623 aa0.48□□□□□ -2.33
CASC1-208ENST00000555240 STAB1Q9NY15 2570 aa0.48□□□□□ -2.33
CASC1-208ENST00000555240 C9orf92A6NGG3 77 aa0.48□□□□□ -2.33
CASC1-208ENST00000555240 CRYBG3Q68DQ2 2970 aa0.48□□□□□ -2.33
CASC1-208ENST00000555240 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
CASC1-208ENST00000555240 CCDC168Q8NDH2 2452 aa0.47□□□□□ -2.33
CASC1-208ENST00000555240 LRP1BQ9NZR2 4599 aa0.47□□□□□ -2.33
CASC1-208ENST00000555240 HIVEP3Q5T1R4 2406 aa0.47□□□□□ -2.33
CASC1-208ENST00000555240 FLGP20930 4061 aaPredicted RBP0.47□□□□□ -2.33
CASC1-208ENST00000555240 TNP1P09430 55 aa0.47□□□□□ -2.33
CASC1-208ENST00000555240 ZFHX4Q86UP3 3567 aa0.47□□□□□ -2.33
CASC1-208ENST00000555240 HRNRQ86YZ3 2850 aaPredicted RBP0.47□□□□□ -2.33
CASC1-208ENST00000555240 FAT3Q8TDW7 4589 aa0.47□□□□□ -2.33
CASC1-208ENST00000555240 NBEAL2Q6ZNJ1 2754 aa0.46□□□□□ -2.34
CASC1-208ENST00000555240 APC2O95996 2303 aa0.46□□□□□ -2.34
CASC1-208ENST00000555240 PRCDQ00LT1 54 aa0.46□□□□□ -2.34
CASC1-208ENST00000555240 DEFB110Q30KQ9 67 aa0.46□□□□□ -2.34
CASC1-208ENST00000555240 KMT2DO14686 5537 aa0.46□□□□□ -2.34
CASC1-208ENST00000555240 SETD2Q9BYW2 2564 aaPredicted RBP0.46□□□□□ -2.34
CASC1-208ENST00000555240 ANKRD11Q6UB99 2663 aaPredicted RBP0.45□□□□□ -2.34
CASC1-208ENST00000555240 CREBBPQ92793 2442 aa0.45□□□□□ -2.34
CASC1-208ENST00000555240 SPTBN4Q9H254 2564 aa0.45□□□□□ -2.34
CASC1-208ENST00000555240 SPRR2DP22532 72 aa0.45□□□□□ -2.34
CASC1-208ENST00000555240 ITPR3Q14573 2671 aa0.45□□□□□ -2.34
CASC1-208ENST00000555240 DMBT1Q9UGM3 2413 aaPredicted RBP0.45□□□□□ -2.34
CASC1-208ENST00000555240 DNAH10Q8IVF4 4471 aa0.44□□□□□ -2.34
CASC1-208ENST00000555240 MDN1Q9NU22 5596 aa0.44□□□□□ -2.34
CASC1-208ENST00000555240 CELSR3Q9NYQ7 3312 aa0.44□□□□□ -2.34
CASC1-208ENST00000555240 COL12A1Q99715 3063 aa0.44□□□□□ -2.34
CASC1-208ENST00000555240 MGAQ8IWI9 3026 aa0.44□□□□□ -2.34
CASC1-208ENST00000555240 PKHD1P08F94 4074 aa0.43□□□□□ -2.34
CASC1-208ENST00000555240 AKAP9Q99996 3911 aa0.43□□□□□ -2.34
CASC1-208ENST00000555240 HMCN2Q8NDA2 5059 aa0.43□□□□□ -2.34
CASC1-208ENST00000555240 FLNBO75369 2602 aaKnown RBP0.42□□□□□ -2.34
CASC1-208ENST00000555240 MAP1BP46821 2468 aaKnown RBP0.42□□□□□ -2.34
CASC1-208ENST00000555240 FAT1Q14517 4588 aa0.42□□□□□ -2.34
CASC1-208ENST00000555240 USP24Q9UPU5 2620 aa0.42□□□□□ -2.34
CASC1-208ENST00000555240 RANBP2P49792 3224 aaKnown RBP0.41□□□□□ -2.34
CASC1-208ENST00000555240 KRTAP6-2Q3LI66 62 aa0.41□□□□□ -2.34
CASC1-208ENST00000555240 Q9Y3F1 56 aa0.41□□□□□ -2.34
CASC1-208ENST00000555240 FAT4Q6V0I7 4981 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms