RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 A0A1B0GVX0 72 aa7.53□□□□□ -1.2
NEDD1-207ENST00000555114 A8MWP4 228 aa7.53□□□□□ -1.2
NEDD1-207ENST00000555114 KRTAP19-6Q3LI70 58 aa7.53□□□□□ -1.2
NEDD1-207ENST00000555114 SPATA45Q537H7 98 aa7.53□□□□□ -1.2
NEDD1-207ENST00000555114 ZCCHC13Q8WW36 166 aaKnown RBP7.53□□□□□ -1.2
NEDD1-207ENST00000555114 PAM16Q9Y3D7 125 aa7.53□□□□□ -1.2
NEDD1-207ENST00000555114 SPINK7P58062 85 aa7.52□□□□□ -1.21
NEDD1-207ENST00000555114 S100A1P23297 94 aa7.51□□□□□ -1.21
NEDD1-207ENST00000555114 C2orf91Q6ZV80 131 aa7.51□□□□□ -1.21
NEDD1-207ENST00000555114 COX6CP09669 75 aa7.5□□□□□ -1.21
NEDD1-207ENST00000555114 PSMB2P49721 201 aa7.5□□□□□ -1.21
NEDD1-207ENST00000555114 VPS25Q9BRG1 176 aa7.49□□□□□ -1.21
NEDD1-207ENST00000555114 VAMP8Q9BV40 100 aa7.49□□□□□ -1.21
NEDD1-207ENST00000555114 J3KT08 172 aa7.48□□□□□ -1.21
NEDD1-207ENST00000555114 FXYD2P54710 66 aa7.48□□□□□ -1.21
NEDD1-207ENST00000555114 UBE2V1Q13404 147 aa7.48□□□□□ -1.21
NEDD1-207ENST00000555114 C21orf62-AS1Q17RA5 79 aa7.47□□□□□ -1.21
NEDD1-207ENST00000555114 LYRM7Q5U5X0 104 aa7.45□□□□□ -1.22
NEDD1-207ENST00000555114 DSCR8Q96T75 97 aa7.45□□□□□ -1.22
NEDD1-207ENST00000555114 NDUFB1O75438 58 aa7.44□□□□□ -1.22
NEDD1-207ENST00000555114 RBM3P98179 157 aaKnown RBP7.44□□□□□ -1.22
NEDD1-207ENST00000555114 WFDC13Q8IUB5 93 aa7.44□□□□□ -1.22
NEDD1-207ENST00000555114 Q8N9P0 234 aaPredicted RBP7.41□□□□□ -1.22
NEDD1-207ENST00000555114 HSD52Q0P140 79 aa7.39□□□□□ -1.23
NEDD1-207ENST00000555114 K7ERJ3 54 aa7.38□□□□□ -1.23
NEDD1-207ENST00000555114 KRTAP6-3Q3LI67 103 aa7.38□□□□□ -1.23
NEDD1-207ENST00000555114 C9JAW5 83 aa7.37□□□□□ -1.23
NEDD1-207ENST00000555114 SCGB1C2P0DMR2 95 aa7.35□□□□□ -1.23
NEDD1-207ENST00000555114 Q6ZQT0 140 aa7.35□□□□□ -1.23
NEDD1-207ENST00000555114 C8orf17Q9NRJ1 99 aa7.35□□□□□ -1.23
NEDD1-207ENST00000555114 IGKV3D-7A0A0C4DH55 119 aa7.31□□□□□ -1.24
NEDD1-207ENST00000555114 H1FX-AS1Q4G0G2 97 aa7.3□□□□□ -1.24
NEDD1-207ENST00000555114 Q6ZVQ6 151 aa7.3□□□□□ -1.24
NEDD1-207ENST00000555114 A0A1B0GW54 56 aa7.29□□□□□ -1.24
NEDD1-207ENST00000555114 BAALC-AS2P0C853 105 aa7.29□□□□□ -1.24
NEDD1-207ENST00000555114 JMJD7-PLA2G4BH0Y9G9 81 aa7.26□□□□□ -1.25
NEDD1-207ENST00000555114 PDE6GP18545 87 aa7.23□□□□□ -1.25
NEDD1-207ENST00000555114 PRR15Q8IV56 129 aa7.23□□□□□ -1.25
NEDD1-207ENST00000555114 TMEM254Q8TBM7 123 aa7.22□□□□□ -1.25
NEDD1-207ENST00000555114 MRPL34Q9BQ48 92 aaKnown RBP7.22□□□□□ -1.25
NEDD1-207ENST00000555114 LOC110117498A0A087WWA1 95 aa7.21□□□□□ -1.26
NEDD1-207ENST00000555114 UQCR10Q9UDW1 63 aa7.21□□□□□ -1.26
NEDD1-207ENST00000555114 NDUFS5O43920 106 aa7.2□□□□□ -1.26
NEDD1-207ENST00000555114 ATXN8Q156A1 80 aa7.19□□□□□ -1.26
NEDD1-207ENST00000555114 NREPQ16612 68 aa7.19□□□□□ -1.26
NEDD1-207ENST00000555114 MMP24-AS1A0A0U1RRL7 71 aa7.17□□□□□ -1.26
NEDD1-207ENST00000555114 PYY3Q5JQD4 70 aa7.17□□□□□ -1.26
NEDD1-207ENST00000555114 hDV103S1A0JD37 113 aa7.16□□□□□ -1.26
NEDD1-207ENST00000555114 C7orf65Q6ZTY9 151 aa7.16□□□□□ -1.26
NEDD1-207ENST00000555114 IGKV2D-30A0A075B6S6 120 aa7.15□□□□□ -1.26
NEDD1-207ENST00000555114 IGKV2-30P06310 120 aa7.15□□□□□ -1.26
NEDD1-207ENST00000555114 C14orf132Q9NPU4 83 aa7.13□□□□□ -1.27
NEDD1-207ENST00000555114 NEBP20929 6669 aa7.13□□□□□ -1.27
NEDD1-207ENST00000555114 A6NN06 94 aa7.12□□□□□ -1.27
NEDD1-207ENST00000555114 FAM236AA0A1B0GUQ0 79 aa7.11□□□□□ -1.27
NEDD1-207ENST00000555114 FAM236BA0A1B0GV22 79 aa7.11□□□□□ -1.27
NEDD1-207ENST00000555114 K7EQZ3 153 aa7.09□□□□□ -1.27
NEDD1-207ENST00000555114 Q5VV11 94 aa7.06□□□□□ -1.28
NEDD1-207ENST00000555114 M0R143 59 aa7.04□□□□□ -1.28
NEDD1-207ENST00000555114 C4orf26Q17RF5 130 aa7.04□□□□□ -1.28
NEDD1-207ENST00000555114 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
NEDD1-207ENST00000555114 NAA38Q9BRA0 125 aaKnown RBP7.04□□□□□ -1.28
NEDD1-207ENST00000555114 BPY2O14599 106 aa7.03□□□□□ -1.28
NEDD1-207ENST00000555114 Q5W150 140 aa7.03□□□□□ -1.28
NEDD1-207ENST00000555114 MUC12Q9UKN1 5478 aa7.02□□□□□ -1.29
NEDD1-207ENST00000555114 KRTAP20-1Q3LI63 56 aa7□□□□□ -1.29
NEDD1-207ENST00000555114 HCG22E2RYF7 251 aa6.99□□□□□ -1.29
NEDD1-207ENST00000555114 MT1BP07438 61 aa6.99□□□□□ -1.29
NEDD1-207ENST00000555114 CASC2Q6XLA1 102 aa6.99□□□□□ -1.29
NEDD1-207ENST00000555114 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
NEDD1-207ENST00000555114 S4R3F8 94 aa6.98□□□□□ -1.29
NEDD1-207ENST00000555114 CXCL6P80162 114 aa6.97□□□□□ -1.29
NEDD1-207ENST00000555114 KRTAP19-8Q3LI54 63 aa6.96□□□□□ -1.3
NEDD1-207ENST00000555114 SPRR2GQ9BYE4 73 aa6.96□□□□□ -1.3
NEDD1-207ENST00000555114 TMA7Q9Y2S6 64 aaKnown RBP6.94□□□□□ -1.3
NEDD1-207ENST00000555114 KRTAP10-5P60370 271 aa6.93□□□□□ -1.3
NEDD1-207ENST00000555114 H3BT86 120 aa6.91□□□□□ -1.3
NEDD1-207ENST00000555114 Q8N9L7 120 aa6.9□□□□□ -1.3
NEDD1-207ENST00000555114 TSTD3H0UI37 97 aa6.89□□□□□ -1.31
NEDD1-207ENST00000555114 KRTAP5-9P26371 169 aa6.89□□□□□ -1.31
NEDD1-207ENST00000555114 C1orf64Q8NEQ6 169 aa6.89□□□□□ -1.31
NEDD1-207ENST00000555114 KLKP1Q107X0 134 aa6.88□□□□□ -1.31
NEDD1-207ENST00000555114 LCA10Q71F78 164 aa6.88□□□□□ -1.31
NEDD1-207ENST00000555114 IMUPQ9GZP8 106 aa6.87□□□□□ -1.31
NEDD1-207ENST00000555114 KRTAP3-1Q9BYR8 98 aa6.86□□□□□ -1.31
NEDD1-207ENST00000555114 BATFQ16520 125 aa6.8□□□□□ -1.32
NEDD1-207ENST00000555114 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
NEDD1-207ENST00000555114 KMT2DO14686 5537 aa6.8□□□□□ -1.32
NEDD1-207ENST00000555114 UBL5Q9BZL1 73 aa6.78□□□□□ -1.32
NEDD1-207ENST00000555114 MDN1Q9NU22 5596 aa6.78□□□□□ -1.32
NEDD1-207ENST00000555114 C9orf118A6NHY6 69 aa6.76□□□□□ -1.33
NEDD1-207ENST00000555114 TP53AIP1Q9HCN2 124 aa6.76□□□□□ -1.33
NEDD1-207ENST00000555114 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
NEDD1-207ENST00000555114 KRTAP2-3P0C7H8 128 aa6.73□□□□□ -1.33
NEDD1-207ENST00000555114 KRTAP2-4Q9BYR9 128 aa6.73□□□□□ -1.33
NEDD1-207ENST00000555114 SMIM6P0DI80 62 aa6.7□□□□□ -1.34
NEDD1-207ENST00000555114 TAX1BP3O14907 124 aa6.68□□□□□ -1.34
NEDD1-207ENST00000555114 H3BS24 57 aa6.67□□□□□ -1.34
NEDD1-207ENST00000555114 SPCS1Q9Y6A9 102 aa6.65□□□□□ -1.34
NEDD1-207ENST00000555114 SPRR2FQ96RM1 72 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms