RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 RETNLBQ9BQ08 111 aa2.37□□□□□ -2.03
KTN1-217ENST00000554831 SPINK1P00995 79 aa2.37□□□□□ -2.03
KTN1-217ENST00000554831 CDC42SE1Q9NRR8 79 aa2.37□□□□□ -2.03
KTN1-217ENST00000554831 LINC01558Q9Y6Z2 57 aa2.37□□□□□ -2.03
KTN1-217ENST00000554831 PLAC8Q9NZF1 115 aa2.36□□□□□ -2.03
KTN1-217ENST00000554831 Q5VV11 94 aa2.36□□□□□ -2.03
KTN1-217ENST00000554831 TYMSOSQ8TAI1 123 aa2.36□□□□□ -2.03
KTN1-217ENST00000554831 PLA2G1BP04054 148 aaKnown RBP2.36□□□□□ -2.03
KTN1-217ENST00000554831 Q75L30 129 aa2.36□□□□□ -2.03
KTN1-217ENST00000554831 C7orf65Q6ZTY9 151 aa2.35□□□□□ -2.03
KTN1-217ENST00000554831 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
KTN1-217ENST00000554831 PANO1I0J062 215 aa2.35□□□□□ -2.03
KTN1-217ENST00000554831 Q6ZR54 194 aa2.35□□□□□ -2.03
KTN1-217ENST00000554831 KRTAP11-1Q8IUC1 163 aa2.34□□□□□ -2.03
KTN1-217ENST00000554831 HRES1P13985 223 aa2.34□□□□□ -2.04
KTN1-217ENST00000554831 LINC00483Q53H64 154 aa2.33□□□□□ -2.04
KTN1-217ENST00000554831 KRTAP13-1Q8IUC0 172 aa2.33□□□□□ -2.04
KTN1-217ENST00000554831 Q96NJ1 140 aa2.33□□□□□ -2.04
KTN1-217ENST00000554831 Q6ZRN7 208 aaPredicted RBP2.32□□□□□ -2.04
KTN1-217ENST00000554831 MIR22HGQ0VDD5 57 aa2.32□□□□□ -2.04
KTN1-217ENST00000554831 COL7A1Q02388 2944 aa2.32□□□□□ -2.04
KTN1-217ENST00000554831 LCA10Q71F78 164 aa2.31□□□□□ -2.04
KTN1-217ENST00000554831 AKAP9Q99996 3911 aa2.31□□□□□ -2.04
KTN1-217ENST00000554831 LINC00304Q8N9R0 145 aa2.31□□□□□ -2.04
KTN1-217ENST00000554831 Q5W150 140 aa2.3□□□□□ -2.04
KTN1-217ENST00000554831 A0A087X002 238 aa2.3□□□□□ -2.04
KTN1-217ENST00000554831 NOTCH2NLQ7Z3S9 236 aa2.3□□□□□ -2.04
KTN1-217ENST00000554831 ZNF469Q96JG9 3925 aaPredicted RBP2.3□□□□□ -2.04
KTN1-217ENST00000554831 DMAC1Q96GE9 116 aa2.3□□□□□ -2.04
KTN1-217ENST00000554831 MEGF8Q7Z7M0 2845 aa2.29□□□□□ -2.04
KTN1-217ENST00000554831 SPINK7P58062 85 aa2.29□□□□□ -2.04
KTN1-217ENST00000554831 ASB16-AS1Q495Z4 193 aa2.29□□□□□ -2.04
KTN1-217ENST00000554831 RBM12B-AS1Q9P1G2 102 aa2.28□□□□□ -2.04
KTN1-217ENST00000554831 Q8N1X5 172 aa2.27□□□□□ -2.05
KTN1-217ENST00000554831 A8MU10 97 aa2.26□□□□□ -2.05
KTN1-217ENST00000554831 SMR3BP02814 79 aaPredicted RBP2.26□□□□□ -2.05
KTN1-217ENST00000554831 KRTAP10-2P60368 255 aa2.25□□□□□ -2.05
KTN1-217ENST00000554831 CSMD3Q7Z407 3707 aa2.25□□□□□ -2.05
KTN1-217ENST00000554831 CAMK2N1Q7Z7J9 78 aa2.25□□□□□ -2.05
KTN1-217ENST00000554831 TRRAPQ9Y4A5 3859 aa2.25□□□□□ -2.05
KTN1-217ENST00000554831 KRTAP10-1P60331 282 aa2.24□□□□□ -2.05
KTN1-217ENST00000554831 A0A1B0GU33 70 aa2.24□□□□□ -2.05
KTN1-217ENST00000554831 SPATA8Q6RVD6 105 aa2.24□□□□□ -2.05
KTN1-217ENST00000554831 LINC01554Q52M75 96 aa2.24□□□□□ -2.05
KTN1-217ENST00000554831 C9orf92A6NGG3 77 aa2.23□□□□□ -2.05
KTN1-217ENST00000554831 A6NN06 94 aa2.23□□□□□ -2.05
KTN1-217ENST00000554831 KRTAP13-2Q52LG2 175 aa2.22□□□□□ -2.05
KTN1-217ENST00000554831 PRAC1Q96KF2 57 aa2.22□□□□□ -2.05
KTN1-217ENST00000554831 KRTAP16-1A8MUX0 517 aa2.2□□□□□ -2.06
KTN1-217ENST00000554831 RPS29P62273 56 aaKnown RBP2.2□□□□□ -2.06
KTN1-217ENST00000554831 Q6ZSA8 131 aa2.2□□□□□ -2.06
KTN1-217ENST00000554831 COX6B2Q6YFQ2 88 aa2.18□□□□□ -2.06
KTN1-217ENST00000554831 KRTAP13-3Q3SY46 172 aa2.18□□□□□ -2.06
KTN1-217ENST00000554831 CSAG1Q6PB30 78 aa2.18□□□□□ -2.06
KTN1-217ENST00000554831 KRTAP1-4P0C5Y4 121 aa2.17□□□□□ -2.06
KTN1-217ENST00000554831 CRIPTQ9P021 101 aa2.17□□□□□ -2.06
KTN1-217ENST00000554831 KRTAP23-1A1A580 65 aa2.16□□□□□ -2.06
KTN1-217ENST00000554831 RPL37P61927 97 aaKnown RBP2.16□□□□□ -2.06
KTN1-217ENST00000554831 A0A0D9SG42 100 aa2.15□□□□□ -2.07
KTN1-217ENST00000554831 A8MUU9 505 aa2.15□□□□□ -2.07
KTN1-217ENST00000554831 H1FX-AS1Q4G0G2 97 aa2.15□□□□□ -2.07
KTN1-217ENST00000554831 ADM2Q7Z4H4 148 aa2.15□□□□□ -2.07
KTN1-217ENST00000554831 LUZP6Q538Z0 58 aa2.14□□□□□ -2.07
KTN1-217ENST00000554831 C20orf166-AS1Q96NR2 134 aa2.14□□□□□ -2.07
KTN1-217ENST00000554831 SPINT4Q6UDR6 99 aa2.14□□□□□ -2.07
KTN1-217ENST00000554831 ANK3Q12955 4377 aaKnown RBP2.11□□□□□ -2.07
KTN1-217ENST00000554831 ROMO1P60602 79 aa2.1□□□□□ -2.07
KTN1-217ENST00000554831 S4R3F8 94 aa2.1□□□□□ -2.07
KTN1-217ENST00000554831 KRTAP25-1Q3LHN0 102 aa2.09□□□□□ -2.07
KTN1-217ENST00000554831 KRTAP21-3Q3LHN1 58 aa2.09□□□□□ -2.07
KTN1-217ENST00000554831 Q5VSD8 79 aa2.08□□□□□ -2.08
KTN1-217ENST00000554831 H0YAA0 97 aa2.07□□□□□ -2.08
KTN1-217ENST00000554831 NDUFAF8A1L188 74 aa2.07□□□□□ -2.08
KTN1-217ENST00000554831 R4GN34 69 aa2.07□□□□□ -2.08
KTN1-217ENST00000554831 ANK2Q01484 3957 aa2.07□□□□□ -2.08
KTN1-217ENST00000554831 PLAC4Q8WY50 150 aa2.06□□□□□ -2.08
KTN1-217ENST00000554831 M0QZ58 72 aa2.05□□□□□ -2.08
KTN1-217ENST00000554831 XP32Q5T750 250 aa2.02□□□□□ -2.09
KTN1-217ENST00000554831 KRTAP3-1Q9BYR8 98 aa2.02□□□□□ -2.09
KTN1-217ENST00000554831 KRTAP10-8P60410 259 aa2.02□□□□□ -2.09
KTN1-217ENST00000554831 LYSTQ99698 3801 aa2□□□□□ -2.09
KTN1-217ENST00000554831 P0C880 135 aa2□□□□□ -2.09
KTN1-217ENST00000554831 A0A1B0GVY2 172 aa1.98□□□□□ -2.09
KTN1-217ENST00000554831 DNHD1Q96M86 4753 aa1.98□□□□□ -2.09
KTN1-217ENST00000554831 TPRXLQ17RH7 258 aa1.97□□□□□ -2.09
KTN1-217ENST00000554831 KRTAP10-6P60371 365 aaPredicted RBP1.96□□□□□ -2.1
KTN1-217ENST00000554831 C10orf95Q9H7T3 257 aa1.96□□□□□ -2.1
KTN1-217ENST00000554831 KRTAP10-4P60372 401 aaPredicted RBP1.94□□□□□ -2.1
KTN1-217ENST00000554831 DNAH11Q96DT5 4516 aa1.93□□□□□ -2.1
KTN1-217ENST00000554831 HUWE1Q7Z6Z7 4374 aaKnown RBP1.93□□□□□ -2.1
KTN1-217ENST00000554831 PP632Q6XCG6 107 aa1.92□□□□□ -2.1
KTN1-217ENST00000554831 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
KTN1-217ENST00000554831 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
KTN1-217ENST00000554831 KRTAP3-3Q9BYR6 98 aa1.92□□□□□ -2.1
KTN1-217ENST00000554831 KRTAP3-2Q9BYR7 98 aa1.92□□□□□ -2.1
KTN1-217ENST00000554831 M0R2T5 61 aa1.91□□□□□ -2.1
KTN1-217ENST00000554831 PLECQ15149 4684 aaKnown RBP1.91□□□□□ -2.1
KTN1-217ENST00000554831 KRTAP12-2P59991 146 aa1.9□□□□□ -2.11
KTN1-217ENST00000554831 DNAH9Q9NYC9 4486 aa1.9□□□□□ -2.11
KTN1-217ENST00000554831 FRAS1Q86XX4 4008 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms