RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 ANAPC11Q9NYG5 84 aa3.8□□□□□ -1.8
PCNX1-207ENST00000554691 CELSR1Q9NYQ6 3014 aa3.79□□□□□ -1.8
PCNX1-207ENST00000554691 A0A0D9SG42 100 aa3.78□□□□□ -1.8
PCNX1-207ENST00000554691 AKAP13Q12802 2813 aa3.78□□□□□ -1.8
PCNX1-207ENST00000554691 STAB2Q8WWQ8 2551 aa3.77□□□□□ -1.81
PCNX1-207ENST00000554691 ASH1LQ9NR48 2969 aaKnown RBP3.76□□□□□ -1.81
PCNX1-207ENST00000554691 ADGRG4Q8IZF6 3080 aa3.76□□□□□ -1.81
PCNX1-207ENST00000554691 FLNCQ14315 2725 aa3.76□□□□□ -1.81
PCNX1-207ENST00000554691 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.75□□□□□ -1.81
PCNX1-207ENST00000554691 KRTAP11-1Q8IUC1 163 aa3.74□□□□□ -1.81
PCNX1-207ENST00000554691 A8MUU9 505 aa3.73□□□□□ -1.81
PCNX1-207ENST00000554691 KRTAP13-1Q8IUC0 172 aa3.72□□□□□ -1.81
PCNX1-207ENST00000554691 KRTAP7-1Q8IUC3 87 aa3.72□□□□□ -1.81
PCNX1-207ENST00000554691 CUBNO60494 3623 aa3.72□□□□□ -1.81
PCNX1-207ENST00000554691 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
PCNX1-207ENST00000554691 UBR5O95071 2799 aaPredicted RBP3.71□□□□□ -1.82
PCNX1-207ENST00000554691 MAP1AP78559 2803 aaPredicted RBP3.71□□□□□ -1.82
PCNX1-207ENST00000554691 NSD1Q96L73 2696 aaPredicted RBP3.71□□□□□ -1.82
PCNX1-207ENST00000554691 C20orf166-AS1Q96NR2 134 aa3.7□□□□□ -1.82
PCNX1-207ENST00000554691 C9orf92A6NGG3 77 aa3.7□□□□□ -1.82
PCNX1-207ENST00000554691 TENM4Q6N022 2769 aa3.69□□□□□ -1.82
PCNX1-207ENST00000554691 RPS29P62273 56 aaKnown RBP3.69□□□□□ -1.82
PCNX1-207ENST00000554691 S4R3F8 94 aa3.68□□□□□ -1.82
PCNX1-207ENST00000554691 COL12A1Q99715 3063 aa3.68□□□□□ -1.82
PCNX1-207ENST00000554691 SMR3BP02814 79 aaPredicted RBP3.68□□□□□ -1.82
PCNX1-207ENST00000554691 CRYBG3Q68DQ2 2970 aa3.67□□□□□ -1.82
PCNX1-207ENST00000554691 FLG2Q5D862 2391 aaPredicted RBP3.67□□□□□ -1.82
PCNX1-207ENST00000554691 UTP20O75691 2785 aaKnown RBP3.67□□□□□ -1.82
PCNX1-207ENST00000554691 ITPR2Q14571 2701 aa3.66□□□□□ -1.82
PCNX1-207ENST00000554691 SEC61BP60468 96 aaKnown RBP3.66□□□□□ -1.82
PCNX1-207ENST00000554691 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
PCNX1-207ENST00000554691 KRTAP1-5Q9BYS1 174 aa3.65□□□□□ -1.83
PCNX1-207ENST00000554691 Q6ZSA8 131 aa3.64□□□□□ -1.83
PCNX1-207ENST00000554691 M0QZ58 72 aa3.62□□□□□ -1.83
PCNX1-207ENST00000554691 LRBAP50851 2863 aa3.62□□□□□ -1.83
PCNX1-207ENST00000554691 HIVEP1P15822 2718 aa3.61□□□□□ -1.83
PCNX1-207ENST00000554691 H0YAA0 97 aa3.59□□□□□ -1.83
PCNX1-207ENST00000554691 KRTAP13-3Q3SY46 172 aa3.59□□□□□ -1.84
PCNX1-207ENST00000554691 ITPR1Q14643 2758 aa3.57□□□□□ -1.84
PCNX1-207ENST00000554691 R4GN34 69 aa3.57□□□□□ -1.84
PCNX1-207ENST00000554691 KMT2BQ9UMN6 2715 aaPredicted RBP3.56□□□□□ -1.84
PCNX1-207ENST00000554691 CELSR2Q9HCU4 2923 aa3.56□□□□□ -1.84
PCNX1-207ENST00000554691 ZNF469Q96JG9 3925 aaPredicted RBP3.56□□□□□ -1.84
PCNX1-207ENST00000554691 OTOGQ6ZRI0 2925 aa3.55□□□□□ -1.84
PCNX1-207ENST00000554691 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
PCNX1-207ENST00000554691 PLAC4Q8WY50 150 aa3.55□□□□□ -1.84
PCNX1-207ENST00000554691 Q6ZRN7 208 aaPredicted RBP3.54□□□□□ -1.84
PCNX1-207ENST00000554691 CSMD3Q7Z407 3707 aa3.54□□□□□ -1.84
PCNX1-207ENST00000554691 HRNRQ86YZ3 2850 aaPredicted RBP3.54□□□□□ -1.84
PCNX1-207ENST00000554691 P0C880 135 aa3.53□□□□□ -1.84
PCNX1-207ENST00000554691 Q5VSD8 79 aa3.53□□□□□ -1.84
PCNX1-207ENST00000554691 M0R2T5 61 aa3.51□□□□□ -1.85
PCNX1-207ENST00000554691 NBEAL2Q6ZNJ1 2754 aa3.5□□□□□ -1.85
PCNX1-207ENST00000554691 KRTAP13-2Q52LG2 175 aa3.5□□□□□ -1.85
PCNX1-207ENST00000554691 ANK3Q12955 4377 aaKnown RBP3.48□□□□□ -1.85
PCNX1-207ENST00000554691 NIPBLQ6KC79 2804 aaeCLIP3.46□□□□□ -1.86
PCNX1-207ENST00000554691 KRTAP10-1P60331 282 aa3.44□□□□□ -1.86
PCNX1-207ENST00000554691 TRRAPQ9Y4A5 3859 aa3.43□□□□□ -1.86
PCNX1-207ENST00000554691 APCP25054 2843 aa3.43□□□□□ -1.86
PCNX1-207ENST00000554691 TENM3Q9P273 2699 aa3.43□□□□□ -1.86
PCNX1-207ENST00000554691 C10orf95Q9H7T3 257 aa3.42□□□□□ -1.86
PCNX1-207ENST00000554691 LYSTQ99698 3801 aa3.41□□□□□ -1.86
PCNX1-207ENST00000554691 ALMS1Q8TCU4 4167 aa3.41□□□□□ -1.86
PCNX1-207ENST00000554691 KRTAP10-2P60368 255 aa3.4□□□□□ -1.87
PCNX1-207ENST00000554691 NF1P21359 2839 aa3.39□□□□□ -1.87
PCNX1-207ENST00000554691 TNP1P09430 55 aa3.37□□□□□ -1.87
PCNX1-207ENST00000554691 TENM2Q9NT68 2774 aa3.37□□□□□ -1.87
PCNX1-207ENST00000554691 KRTAP1-4P0C5Y4 121 aa3.36□□□□□ -1.87
PCNX1-207ENST00000554691 TPRXLQ17RH7 258 aa3.35□□□□□ -1.87
PCNX1-207ENST00000554691 ANK2Q01484 3957 aa3.34□□□□□ -1.87
PCNX1-207ENST00000554691 KRTAP15-1Q3LI76 137 aa3.34□□□□□ -1.87
PCNX1-207ENST00000554691 TENM1Q9UKZ4 2725 aa3.34□□□□□ -1.88
PCNX1-207ENST00000554691 MXRA5Q9NR99 2828 aa3.29□□□□□ -1.88
PCNX1-207ENST00000554691 DNAH1Q9P2D7 4330 aa3.29□□□□□ -1.88
PCNX1-207ENST00000554691 CMYA5Q8N3K9 4069 aa3.27□□□□□ -1.89
PCNX1-207ENST00000554691 PKD1L1Q8TDX9 2849 aa3.26□□□□□ -1.89
PCNX1-207ENST00000554691 KRTAP12-1P59990 96 aa3.26□□□□□ -1.89
PCNX1-207ENST00000554691 XP32Q5T750 250 aa3.25□□□□□ -1.89
PCNX1-207ENST00000554691 KRTAP10-8P60410 259 aa3.25□□□□□ -1.89
PCNX1-207ENST00000554691 ZANQ9Y493 2812 aa3.24□□□□□ -1.89
PCNX1-207ENST00000554691 FBN2P35556 2912 aa3.24□□□□□ -1.89
PCNX1-207ENST00000554691 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
PCNX1-207ENST00000554691 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
PCNX1-207ENST00000554691 KRTAP3-1Q9BYR8 98 aa3.23□□□□□ -1.89
PCNX1-207ENST00000554691 COL7A1Q02388 2944 aa3.22□□□□□ -1.89
PCNX1-207ENST00000554691 TGP01266 2768 aa3.22□□□□□ -1.89
PCNX1-207ENST00000554691 INE1O15225 51 aa3.22□□□□□ -1.89
PCNX1-207ENST00000554691 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.89
PCNX1-207ENST00000554691 FBN1P35555 2871 aaKnown RBP3.2□□□□□ -1.9
PCNX1-207ENST00000554691 SRRM2Q9UQ35 2752 aaKnown RBP3.2□□□□□ -1.9
PCNX1-207ENST00000554691 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
PCNX1-207ENST00000554691 FRAS1Q86XX4 4008 aa3.17□□□□□ -1.9
PCNX1-207ENST00000554691 DNAH7Q8WXX0 4024 aa3.14□□□□□ -1.91
PCNX1-207ENST00000554691 DNAH9Q9NYC9 4486 aa3.12□□□□□ -1.91
PCNX1-207ENST00000554691 PDZD2O15018 2839 aa3.11□□□□□ -1.91
PCNX1-207ENST00000554691 KRTAP3-2Q9BYR7 98 aa3.11□□□□□ -1.91
PCNX1-207ENST00000554691 VWFP04275 2813 aa3.11□□□□□ -1.91
PCNX1-207ENST00000554691 FBN3Q75N90 2809 aa3.11□□□□□ -1.91
PCNX1-207ENST00000554691 DNAH10Q8IVF4 4471 aa3.11□□□□□ -1.91
PCNX1-207ENST00000554691 KRTAP23-1A1A580 65 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms