RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 KRTAP10-1P60331 282 aa2.79□□□□□ -1.96
PPP4R3A-204ENST00000554574 HAMPP81172 84 aa2.79□□□□□ -1.96
PPP4R3A-204ENST00000554574 NREPQ16612 68 aa2.79□□□□□ -1.96
PPP4R3A-204ENST00000554574 SCXQ7RTU7 201 aa2.79□□□□□ -1.96
PPP4R3A-204ENST00000554574 ANAPC13Q9BS18 74 aa2.79□□□□□ -1.96
PPP4R3A-204ENST00000554574 DNAH8Q96JB1 4490 aa2.79□□□□□ -1.96
PPP4R3A-204ENST00000554574 IGLV7-43P04211 117 aa2.78□□□□□ -1.96
PPP4R3A-204ENST00000554574 DNAH11Q96DT5 4516 aa2.78□□□□□ -1.96
PPP4R3A-204ENST00000554574 A0A087WVE0 104 aa2.78□□□□□ -1.97
PPP4R3A-204ENST00000554574 RPL37AP61513 92 aaKnown RBP2.78□□□□□ -1.97
PPP4R3A-204ENST00000554574 PKHD1P08F94 4074 aa2.77□□□□□ -1.97
PPP4R3A-204ENST00000554574 ATOX1O00244 68 aa2.77□□□□□ -1.97
PPP4R3A-204ENST00000554574 DNAH5Q8TE73 4624 aa2.77□□□□□ -1.97
PPP4R3A-204ENST00000554574 SMIM26A0A096LP01 95 aa2.76□□□□□ -1.97
PPP4R3A-204ENST00000554574 A0A0G2JQZ4 141 aa2.76□□□□□ -1.97
PPP4R3A-204ENST00000554574 BPY2O14599 106 aa2.76□□□□□ -1.97
PPP4R3A-204ENST00000554574 SACSQ9NZJ4 4579 aa2.76□□□□□ -1.97
PPP4R3A-204ENST00000554574 A0A1B0GVX0 72 aa2.76□□□□□ -1.97
PPP4R3A-204ENST00000554574 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
PPP4R3A-204ENST00000554574 V9GYY9 64 aa2.76□□□□□ -1.97
PPP4R3A-204ENST00000554574 A0A087WSZ3 146 aa2.75□□□□□ -1.97
PPP4R3A-204ENST00000554574 A0A1B0GVY2 172 aa2.75□□□□□ -1.97
PPP4R3A-204ENST00000554574 IGKV4-1P06312 121 aa2.74□□□□□ -1.97
PPP4R3A-204ENST00000554574 C9orf153Q5TBE3 101 aa2.74□□□□□ -1.97
PPP4R3A-204ENST00000554574 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
PPP4R3A-204ENST00000554574 KRTAP10-6P60371 365 aaPredicted RBP2.74□□□□□ -1.97
PPP4R3A-204ENST00000554574 MOBPQ13875 183 aa2.74□□□□□ -1.97
PPP4R3A-204ENST00000554574 SERP2Q8N6R1 65 aa2.74□□□□□ -1.97
PPP4R3A-204ENST00000554574 ANAPC11Q9NYG5 84 aa2.74□□□□□ -1.97
PPP4R3A-204ENST00000554574 UQCRQO14949 82 aa2.73□□□□□ -1.97
PPP4R3A-204ENST00000554574 COX7CP15954 63 aa2.73□□□□□ -1.97
PPP4R3A-204ENST00000554574 SMIM20Q8N5G0 67 aa2.73□□□□□ -1.97
PPP4R3A-204ENST00000554574 Q8N9L7 120 aa2.73□□□□□ -1.97
PPP4R3A-204ENST00000554574 VPS13BQ7Z7G8 4022 aa2.73□□□□□ -1.97
PPP4R3A-204ENST00000554574 A8MU10 97 aa2.72□□□□□ -1.97
PPP4R3A-204ENST00000554574 CCDC179H3BU77 68 aa2.72□□□□□ -1.97
PPP4R3A-204ENST00000554574 FAM229BQ4G0N7 80 aa2.72□□□□□ -1.97
PPP4R3A-204ENST00000554574 LINC00472Q9H8W2 130 aa2.72□□□□□ -1.97
PPP4R3A-204ENST00000554574 SS18L2Q9UHA2 77 aa2.72□□□□□ -1.97
PPP4R3A-204ENST00000554574 K7EQZ3 153 aa2.72□□□□□ -1.97
PPP4R3A-204ENST00000554574 CD164Q04900 197 aa2.72□□□□□ -1.97
PPP4R3A-204ENST00000554574 SSBP3-AS1Q7Z2R9 100 aa2.72□□□□□ -1.97
PPP4R3A-204ENST00000554574 LRP1BQ9NZR2 4599 aa2.72□□□□□ -1.97
PPP4R3A-204ENST00000554574 TRAV7A0A075B6U4 112 aa2.71□□□□□ -1.98
PPP4R3A-204ENST00000554574 J3KT08 172 aa2.71□□□□□ -1.98
PPP4R3A-204ENST00000554574 KMT2CQ8NEZ4 4911 aaKnown RBP2.71□□□□□ -1.98
PPP4R3A-204ENST00000554574 A0A0U1RQV1 116 aa2.7□□□□□ -1.98
PPP4R3A-204ENST00000554574 A8MWP4 228 aa2.7□□□□□ -1.98
PPP4R3A-204ENST00000554574 DEFB116Q30KQ4 102 aa2.7□□□□□ -1.98
PPP4R3A-204ENST00000554574 Q96NJ1 140 aa2.7□□□□□ -1.98
PPP4R3A-204ENST00000554574 SPINK6Q6UWN8 80 aa2.7□□□□□ -1.98
PPP4R3A-204ENST00000554574 PRR15Q8IV56 129 aa2.7□□□□□ -1.98
PPP4R3A-204ENST00000554574 HCG22E2RYF7 251 aa2.69□□□□□ -1.98
PPP4R3A-204ENST00000554574 KRTAP13-2Q52LG2 175 aa2.69□□□□□ -1.98
PPP4R3A-204ENST00000554574 HRCT1Q6UXD1 115 aa2.69□□□□□ -1.98
PPP4R3A-204ENST00000554574 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
PPP4R3A-204ENST00000554574 RYR2Q92736 4967 aa2.69□□□□□ -1.98
PPP4R3A-204ENST00000554574 NDUFB1O75438 58 aa2.68□□□□□ -1.98
PPP4R3A-204ENST00000554574 ASB16-AS1Q495Z4 193 aa2.68□□□□□ -1.98
PPP4R3A-204ENST00000554574 Q5XG85 94 aa2.68□□□□□ -1.98
PPP4R3A-204ENST00000554574 SMR3BP02814 79 aaPredicted RBP2.67□□□□□ -1.98
PPP4R3A-204ENST00000554574 KRTAP10-4P60372 401 aaPredicted RBP2.67□□□□□ -1.98
PPP4R3A-204ENST00000554574 KLKP1Q107X0 134 aa2.67□□□□□ -1.98
PPP4R3A-204ENST00000554574 CASC2Q6XLA1 102 aa2.66□□□□□ -1.98
PPP4R3A-204ENST00000554574 C20orf197Q8N268 126 aa2.66□□□□□ -1.98
PPP4R3A-204ENST00000554574 MMP24-AS1A0A0U1RRL7 71 aa2.66□□□□□ -1.98
PPP4R3A-204ENST00000554574 WFDC13Q8IUB5 93 aa2.66□□□□□ -1.98
PPP4R3A-204ENST00000554574 CYSTM1Q9H1C7 97 aa2.66□□□□□ -1.98
PPP4R3A-204ENST00000554574 C8orf17Q9NRJ1 99 aa2.66□□□□□ -1.98
PPP4R3A-204ENST00000554574 DYNC1H1Q14204 4646 aaKnown RBP2.65□□□□□ -1.99
PPP4R3A-204ENST00000554574 APOBP04114 4563 aaKnown RBP2.65□□□□□ -1.99
PPP4R3A-204ENST00000554574 PSPHP1O15172 72 aa2.65□□□□□ -1.99
PPP4R3A-204ENST00000554574 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
PPP4R3A-204ENST00000554574 TMEM254Q8TBM7 123 aa2.65□□□□□ -1.99
PPP4R3A-204ENST00000554574 LIMD2Q9BT23 127 aa2.65□□□□□ -1.99
PPP4R3A-204ENST00000554574 hDV103S1A0JD37 113 aa2.64□□□□□ -1.99
PPP4R3A-204ENST00000554574 SPINK1P00995 79 aa2.64□□□□□ -1.99
PPP4R3A-204ENST00000554574 IGHV6-1A0A0B4J1U7 121 aa2.64□□□□□ -1.99
PPP4R3A-204ENST00000554574 NDUFC1O43677 76 aa2.64□□□□□ -1.99
PPP4R3A-204ENST00000554574 TMEM258P61165 79 aa2.64□□□□□ -1.99
PPP4R3A-204ENST00000554574 RPS29P62273 56 aaKnown RBP2.64□□□□□ -1.99
PPP4R3A-204ENST00000554574 C5orf47Q569G3 176 aa2.64□□□□□ -1.99
PPP4R3A-204ENST00000554574 Q5W150 140 aa2.64□□□□□ -1.99
PPP4R3A-204ENST00000554574 H7BZZ5 65 aa2.63□□□□□ -1.99
PPP4R3A-204ENST00000554574 C1orf195Q5TG92 126 aa2.63□□□□□ -1.99
PPP4R3A-204ENST00000554574 SPAG11AQ6PDA7 123 aa2.63□□□□□ -1.99
PPP4R3A-204ENST00000554574 SNURFQ9Y675 71 aa2.63□□□□□ -1.99
PPP4R3A-204ENST00000554574 LINC00304Q8N9R0 145 aa2.62□□□□□ -1.99
PPP4R3A-204ENST00000554574 TP53AIP1Q9HCN2 124 aa2.62□□□□□ -1.99
PPP4R3A-204ENST00000554574 FAT1Q14517 4588 aa2.62□□□□□ -1.99
PPP4R3A-204ENST00000554574 C8orf87E5RJ46 101 aa2.62□□□□□ -1.99
PPP4R3A-204ENST00000554574 NDUFS5O43920 106 aa2.62□□□□□ -1.99
PPP4R3A-204ENST00000554574 MRPL34Q9BQ48 92 aaKnown RBP2.62□□□□□ -1.99
PPP4R3A-204ENST00000554574 FLG2Q5D862 2391 aaPredicted RBP2.61□□□□□ -1.99
PPP4R3A-204ENST00000554574 H3BPC8 53 aa2.61□□□□□ -1.99
PPP4R3A-204ENST00000554574 MP68P56378 58 aa2.61□□□□□ -1.99
PPP4R3A-204ENST00000554574 ZCCHC13Q8WW36 166 aaKnown RBP2.61□□□□□ -1.99
PPP4R3A-204ENST00000554574 RYR3Q15413 4870 aa2.61□□□□□ -1.99
PPP4R3A-204ENST00000554574 TRAV22A0A0B4J277 110 aa2.6□□□□□ -1.99
PPP4R3A-204ENST00000554574 Q5VSD8 79 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms