RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 IGKV3D-7A0A0C4DH55 119 aa4.34□□□□□ -1.71
TDP1-209ENST00000554180 MT-ATP8P03928 68 aa4.34□□□□□ -1.71
TDP1-209ENST00000554180 DSCR10P59022 87 aa4.34□□□□□ -1.71
TDP1-209ENST00000554180 NDUFB1O75438 58 aa4.33□□□□□ -1.72
TDP1-209ENST00000554180 DEFB116Q30KQ4 102 aa4.33□□□□□ -1.72
TDP1-209ENST00000554180 ABCA13Q86UQ4 5058 aa4.32□□□□□ -1.72
TDP1-209ENST00000554180 FP248Q71RG6 208 aaPredicted RBP4.32□□□□□ -1.72
TDP1-209ENST00000554180 PRR15Q8IV56 129 aa4.32□□□□□ -1.72
TDP1-209ENST00000554180 A0A1B0GVX0 72 aa4.31□□□□□ -1.72
TDP1-209ENST00000554180 K7EQZ3 153 aa4.31□□□□□ -1.72
TDP1-209ENST00000554180 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
TDP1-209ENST00000554180 HIST1H4AP62805 103 aaKnown RBP4.3□□□□□ -1.72
TDP1-209ENST00000554180 Q8N9L7 120 aa4.3□□□□□ -1.72
TDP1-209ENST00000554180 C8orf87E5RJ46 101 aa4.29□□□□□ -1.72
TDP1-209ENST00000554180 IGHV6-1A0A0B4J1U7 121 aa4.28□□□□□ -1.72
TDP1-209ENST00000554180 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
TDP1-209ENST00000554180 HCG22E2RYF7 251 aa4.27□□□□□ -1.73
TDP1-209ENST00000554180 C8orf17Q9NRJ1 99 aa4.27□□□□□ -1.73
TDP1-209ENST00000554180 A0A087WVE0 104 aa4.26□□□□□ -1.73
TDP1-209ENST00000554180 MMP24-AS1A0A0U1RRL7 71 aa4.26□□□□□ -1.73
TDP1-209ENST00000554180 IGLV7-46A0A075B6I9 117 aa4.25□□□□□ -1.73
TDP1-209ENST00000554180 hDV103S1A0JD37 113 aa4.25□□□□□ -1.73
TDP1-209ENST00000554180 LINC00313P59037 77 aa4.25□□□□□ -1.73
TDP1-209ENST00000554180 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
TDP1-209ENST00000554180 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
TDP1-209ENST00000554180 SCGB1A1P11684 91 aa4.24□□□□□ -1.73
TDP1-209ENST00000554180 CASC2Q6XLA1 102 aa4.24□□□□□ -1.73
TDP1-209ENST00000554180 TMEM254Q8TBM7 123 aa4.24□□□□□ -1.73
TDP1-209ENST00000554180 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
TDP1-209ENST00000554180 PRR4Q16378 134 aa4.22□□□□□ -1.73
TDP1-209ENST00000554180 TPRXLQ17RH7 258 aa4.22□□□□□ -1.73
TDP1-209ENST00000554180 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
TDP1-209ENST00000554180 WFDC13Q8IUB5 93 aa4.22□□□□□ -1.73
TDP1-209ENST00000554180 MRPL34Q9BQ48 92 aaKnown RBP4.22□□□□□ -1.73
TDP1-209ENST00000554180 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
TDP1-209ENST00000554180 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.74
TDP1-209ENST00000554180 ATOX1O00244 68 aa4.2□□□□□ -1.74
TDP1-209ENST00000554180 SMIM20Q8N5G0 67 aa4.2□□□□□ -1.74
TDP1-209ENST00000554180 Q8N9P0 234 aaPredicted RBP4.2□□□□□ -1.74
TDP1-209ENST00000554180 C9orf92A6NGG3 77 aa4.19□□□□□ -1.74
TDP1-209ENST00000554180 C20orf166-AS1Q96NR2 134 aa4.19□□□□□ -1.74
TDP1-209ENST00000554180 TP53AIP1Q9HCN2 124 aa4.19□□□□□ -1.74
TDP1-209ENST00000554180 H3BS24 57 aa4.18□□□□□ -1.74
TDP1-209ENST00000554180 A8MUU9 505 aa4.17□□□□□ -1.74
TDP1-209ENST00000554180 OCR1Q9BZK8 76 aa4.17□□□□□ -1.74
TDP1-209ENST00000554180 UQCRQO14949 82 aa4.16□□□□□ -1.74
TDP1-209ENST00000554180 NDUFS5O43920 106 aa4.16□□□□□ -1.74
TDP1-209ENST00000554180 XP32Q5T750 250 aa4.16□□□□□ -1.74
TDP1-209ENST00000554180 Q75L30 129 aa4.16□□□□□ -1.74
TDP1-209ENST00000554180 TRAV7A0A075B6U4 112 aa4.15□□□□□ -1.75
TDP1-209ENST00000554180 SERP2Q8N6R1 65 aa4.14□□□□□ -1.75
TDP1-209ENST00000554180 ANAPC13Q9BS18 74 aa4.14□□□□□ -1.75
TDP1-209ENST00000554180 LORP23490 312 aaPredicted RBP4.13□□□□□ -1.75
TDP1-209ENST00000554180 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
TDP1-209ENST00000554180 HERC1Q15751 4861 aa4.12□□□□□ -1.75
TDP1-209ENST00000554180 TRAV22A0A0B4J277 110 aa4.12□□□□□ -1.75
TDP1-209ENST00000554180 C5orf47Q569G3 176 aa4.12□□□□□ -1.75
TDP1-209ENST00000554180 ZCCHC13Q8WW36 166 aaKnown RBP4.11□□□□□ -1.75
TDP1-209ENST00000554180 H3BPC8 53 aa4.1□□□□□ -1.75
TDP1-209ENST00000554180 COX7CP15954 63 aa4.1□□□□□ -1.75
TDP1-209ENST00000554180 MP68P56378 58 aa4.1□□□□□ -1.75
TDP1-209ENST00000554180 ATP11AUNQ6ZP68 121 aa4.1□□□□□ -1.75
TDP1-209ENST00000554180 H0Y9P7 68 aa4.09□□□□□ -1.75
TDP1-209ENST00000554180 Q5W150 140 aa4.08□□□□□ -1.76
TDP1-209ENST00000554180 LOC101927531A0A1B0GV80 90 aa4.07□□□□□ -1.76
TDP1-209ENST00000554180 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
TDP1-209ENST00000554180 KLKP1Q107X0 134 aa4.06□□□□□ -1.76
TDP1-209ENST00000554180 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
TDP1-209ENST00000554180 A0A0U1RQV1 116 aa4.05□□□□□ -1.76
TDP1-209ENST00000554180 C20orf197Q8N268 126 aa4.05□□□□□ -1.76
TDP1-209ENST00000554180 LINC00208Q96KT6 92 aa4.05□□□□□ -1.76
TDP1-209ENST00000554180 LRP2P98164 4655 aa4.04□□□□□ -1.76
TDP1-209ENST00000554180 IGKV2-30P06310 120 aa4.04□□□□□ -1.76
TDP1-209ENST00000554180 PCP4P48539 62 aa4.04□□□□□ -1.76
TDP1-209ENST00000554180 PCOTHQ58A44 107 aa4.04□□□□□ -1.76
TDP1-209ENST00000554180 C7orf65Q6ZTY9 151 aa4.04□□□□□ -1.76
TDP1-209ENST00000554180 C1orf64Q8NEQ6 169 aa4.04□□□□□ -1.76
TDP1-209ENST00000554180 LPAP08519 4548 aa4.04□□□□□ -1.76
TDP1-209ENST00000554180 CCDC179H3BU77 68 aa4.02□□□□□ -1.77
TDP1-209ENST00000554180 CYP4F30PQ9H0H9 118 aa4.02□□□□□ -1.77
TDP1-209ENST00000554180 IGKV2D-30A0A075B6S6 120 aa4.01□□□□□ -1.77
TDP1-209ENST00000554180 NDUFC1O43677 76 aa4.01□□□□□ -1.77
TDP1-209ENST00000554180 SNURFQ9Y675 71 aa4.01□□□□□ -1.77
TDP1-209ENST00000554180 SPINK7P58062 85 aa4□□□□□ -1.77
TDP1-209ENST00000554180 H7BZZ5 65 aa3.96□□□□□ -1.78
TDP1-209ENST00000554180 SPANXA2-OT1Q8N9U9 137 aa3.96□□□□□ -1.78
TDP1-209ENST00000554180 CYSTM1Q9H1C7 97 aa3.96□□□□□ -1.78
TDP1-209ENST00000554180 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.78
TDP1-209ENST00000554180 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
TDP1-209ENST00000554180 HRES1P13985 223 aa3.94□□□□□ -1.78
TDP1-209ENST00000554180 TMEM258P61165 79 aa3.93□□□□□ -1.78
TDP1-209ENST00000554180 MPLKIPQ8TAP9 179 aa3.93□□□□□ -1.78
TDP1-209ENST00000554180 ATP5EP56381 51 aaPredicted RBP3.92□□□□□ -1.78
TDP1-209ENST00000554180 KRTAP4-1Q9BYQ7 146 aa3.92□□□□□ -1.78
TDP1-209ENST00000554180 A8MUN3 132 aa3.91□□□□□ -1.78
TDP1-209ENST00000554180 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
TDP1-209ENST00000554180 RBM12B-AS1Q9P1G2 102 aa3.91□□□□□ -1.78
TDP1-209ENST00000554180 C4orf26Q17RF5 130 aa3.9□□□□□ -1.79
TDP1-209ENST00000554180 COX6B2Q6YFQ2 88 aa3.9□□□□□ -1.79
TDP1-209ENST00000554180 DMAC1Q96GE9 116 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms