RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
ACTN1-212ENST00000554158 IGKV2D-30A0A075B6S6 120 aa4.06□□□□□ -1.76
ACTN1-212ENST00000554158 Q8N9P0 234 aaPredicted RBP4.06□□□□□ -1.76
ACTN1-212ENST00000554158 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
ACTN1-212ENST00000554158 COL5A1-AS1Q5SY13 56 aa4.05□□□□□ -1.76
ACTN1-212ENST00000554158 IGKV4-1P06312 121 aa4.04□□□□□ -1.76
ACTN1-212ENST00000554158 NDUFV3P56181 108 aaKnown RBP4.04□□□□□ -1.76
ACTN1-212ENST00000554158 H3BMG7 143 aa4.03□□□□□ -1.76
ACTN1-212ENST00000554158 HIST1H4GQ99525 98 aa4.03□□□□□ -1.76
ACTN1-212ENST00000554158 FABP2P12104 132 aa4.02□□□□□ -1.77
ACTN1-212ENST00000554158 RAB37Q96AX2 223 aa4.02□□□□□ -1.77
ACTN1-212ENST00000554158 H0YGX0 51 aa4.01□□□□□ -1.77
ACTN1-212ENST00000554158 HRES1P13985 223 aa4.01□□□□□ -1.77
ACTN1-212ENST00000554158 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
ACTN1-212ENST00000554158 OCR1Q9BZK8 76 aa4.01□□□□□ -1.77
ACTN1-212ENST00000554158 IGHV6-1A0A0B4J1U7 121 aa4□□□□□ -1.77
ACTN1-212ENST00000554158 A8MWP4 228 aa3.99□□□□□ -1.77
ACTN1-212ENST00000554158 SCGB1A1P11684 91 aa3.99□□□□□ -1.77
ACTN1-212ENST00000554158 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
ACTN1-212ENST00000554158 ANKRD29Q8N6D5 301 aa3.99□□□□□ -1.77
ACTN1-212ENST00000554158 VPS25Q9BRG1 176 aa3.99□□□□□ -1.77
ACTN1-212ENST00000554158 KRTAP16-1A8MUX0 517 aa3.98□□□□□ -1.77
ACTN1-212ENST00000554158 NOTCH2NLQ7Z3S9 236 aa3.98□□□□□ -1.77
ACTN1-212ENST00000554158 K7ERU9 68 aa3.97□□□□□ -1.77
ACTN1-212ENST00000554158 DNAL4O96015 105 aa3.97□□□□□ -1.77
ACTN1-212ENST00000554158 SEC61GP60059 68 aa3.97□□□□□ -1.77
ACTN1-212ENST00000554158 LYRM7Q5U5X0 104 aa3.97□□□□□ -1.77
ACTN1-212ENST00000554158 TRBV7-4A0A0J9YYF1 115 aa3.96□□□□□ -1.78
ACTN1-212ENST00000554158 A0A1B0GV72 72 aa3.96□□□□□ -1.78
ACTN1-212ENST00000554158 A0A1B0GX51 115 aa3.96□□□□□ -1.78
ACTN1-212ENST00000554158 C8orf87E5RJ46 101 aa3.96□□□□□ -1.78
ACTN1-212ENST00000554158 TRACP01848 142 aa3.96□□□□□ -1.78
ACTN1-212ENST00000554158 DEFB116Q30KQ4 102 aa3.96□□□□□ -1.78
ACTN1-212ENST00000554158 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
ACTN1-212ENST00000554158 UQCR10Q9UDW1 63 aa3.96□□□□□ -1.78
ACTN1-212ENST00000554158 A0A1W2PNM2 257 aa3.95□□□□□ -1.78
ACTN1-212ENST00000554158 H3BQ85 93 aa3.95□□□□□ -1.78
ACTN1-212ENST00000554158 BATFQ16520 125 aa3.95□□□□□ -1.78
ACTN1-212ENST00000554158 VAMP8Q9BV40 100 aa3.95□□□□□ -1.78
ACTN1-212ENST00000554158 CCKP06307 115 aa3.94□□□□□ -1.78
ACTN1-212ENST00000554158 SPINK7P58062 85 aa3.94□□□□□ -1.78
ACTN1-212ENST00000554158 ZCCHC13Q8WW36 166 aaKnown RBP3.94□□□□□ -1.78
ACTN1-212ENST00000554158 A0A0B4J2C4 111 aa3.93□□□□□ -1.78
ACTN1-212ENST00000554158 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
ACTN1-212ENST00000554158 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
ACTN1-212ENST00000554158 ORMDL1Q9P0S3 153 aa3.93□□□□□ -1.78
ACTN1-212ENST00000554158 WFDC13Q8IUB5 93 aa3.92□□□□□ -1.78
ACTN1-212ENST00000554158 TMEM256-PLSCR3K7ERE1 68 aa3.91□□□□□ -1.78
ACTN1-212ENST00000554158 TAX1BP3O14907 124 aa3.91□□□□□ -1.78
ACTN1-212ENST00000554158 NDUFB1O75438 58 aa3.91□□□□□ -1.78
ACTN1-212ENST00000554158 COX8AP10176 69 aa3.91□□□□□ -1.78
ACTN1-212ENST00000554158 SPATA45Q537H7 98 aa3.91□□□□□ -1.78
ACTN1-212ENST00000554158 DSCR8Q96T75 97 aa3.91□□□□□ -1.78
ACTN1-212ENST00000554158 LINC00472Q9H8W2 130 aa3.91□□□□□ -1.78
ACTN1-212ENST00000554158 J3KT08 172 aa3.9□□□□□ -1.79
ACTN1-212ENST00000554158 PRO1854Q9UHT4 67 aa3.9□□□□□ -1.79
ACTN1-212ENST00000554158 PSMB2P49721 201 aa3.89□□□□□ -1.79
ACTN1-212ENST00000554158 COX6CP09669 75 aa3.88□□□□□ -1.79
ACTN1-212ENST00000554158 HIGD1BQ9P298 99 aa3.87□□□□□ -1.79
ACTN1-212ENST00000554158 CEND1Q8N111 149 aa3.86□□□□□ -1.79
ACTN1-212ENST00000554158 KRTAP4-8A0A0G2JLE6 195 aa3.85□□□□□ -1.79
ACTN1-212ENST00000554158 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
ACTN1-212ENST00000554158 RBM3P98179 157 aaKnown RBP3.85□□□□□ -1.79
ACTN1-212ENST00000554158 GTF2H5Q6ZYL4 71 aa3.85□□□□□ -1.79
ACTN1-212ENST00000554158 IGKV3D-7A0A0C4DH55 119 aa3.84□□□□□ -1.79
ACTN1-212ENST00000554158 K7EP34 96 aa3.84□□□□□ -1.79
ACTN1-212ENST00000554158 HSD52Q0P140 79 aa3.84□□□□□ -1.79
ACTN1-212ENST00000554158 H1FX-AS1Q4G0G2 97 aa3.84□□□□□ -1.79
ACTN1-212ENST00000554158 A6NN06 94 aa3.82□□□□□ -1.8
ACTN1-212ENST00000554158 C9JAW5 83 aa3.82□□□□□ -1.8
ACTN1-212ENST00000554158 C8orf17Q9NRJ1 99 aa3.82□□□□□ -1.8
ACTN1-212ENST00000554158 FAM236AA0A1B0GUQ0 79 aa3.81□□□□□ -1.8
ACTN1-212ENST00000554158 FAM236BA0A1B0GV22 79 aa3.81□□□□□ -1.8
ACTN1-212ENST00000554158 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
ACTN1-212ENST00000554158 NEBP20929 6669 aa3.81□□□□□ -1.8
ACTN1-212ENST00000554158 NDUFS5O43920 106 aa3.8□□□□□ -1.8
ACTN1-212ENST00000554158 SCGB1C2P0DMR2 95 aa3.8□□□□□ -1.8
ACTN1-212ENST00000554158 J3QR89 54 aa3.79□□□□□ -1.8
ACTN1-212ENST00000554158 FXYD2P54710 66 aa3.79□□□□□ -1.8
ACTN1-212ENST00000554158 Q6ZQT0 140 aa3.78□□□□□ -1.8
ACTN1-212ENST00000554158 C2orf91Q6ZV80 131 aa3.78□□□□□ -1.8
ACTN1-212ENST00000554158 A0A1W2PPM0 123 aa3.77□□□□□ -1.81
ACTN1-212ENST00000554158 K7ERJ3 54 aa3.76□□□□□ -1.81
ACTN1-212ENST00000554158 Q5VV11 94 aa3.76□□□□□ -1.81
ACTN1-212ENST00000554158 SPCS1Q9Y6A9 102 aa3.76□□□□□ -1.81
ACTN1-212ENST00000554158 A0A1B0GW54 56 aa3.75□□□□□ -1.81
ACTN1-212ENST00000554158 F8W1H4 67 aa3.75□□□□□ -1.81
ACTN1-212ENST00000554158 BAALC-AS2P0C853 105 aa3.75□□□□□ -1.81
ACTN1-212ENST00000554158 C7orf65Q6ZTY9 151 aa3.75□□□□□ -1.81
ACTN1-212ENST00000554158 TMEM254Q8TBM7 123 aa3.75□□□□□ -1.81
ACTN1-212ENST00000554158 MRPL34Q9BQ48 92 aaKnown RBP3.75□□□□□ -1.81
ACTN1-212ENST00000554158 JMJD7-PLA2G4BH0Y9G9 81 aa3.74□□□□□ -1.81
ACTN1-212ENST00000554158 PRR15Q8IV56 129 aa3.74□□□□□ -1.81
ACTN1-212ENST00000554158 hDV103S1A0JD37 113 aa3.73□□□□□ -1.81
ACTN1-212ENST00000554158 PDE6GP18545 87 aa3.73□□□□□ -1.81
ACTN1-212ENST00000554158 NREPQ16612 68 aa3.73□□□□□ -1.81
ACTN1-212ENST00000554158 C5orf47Q569G3 176 aa3.73□□□□□ -1.81
ACTN1-212ENST00000554158 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
ACTN1-212ENST00000554158 IMUPQ9GZP8 106 aa3.73□□□□□ -1.81
ACTN1-212ENST00000554158 CXCL6P80162 114 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms