RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 DNAL4O96015 105 aa1.63□□□□□ -2.15
PABPN1-204ENST00000554062 HBDP02042 147 aa1.63□□□□□ -2.15
PABPN1-204ENST00000554062 BRK1Q8WUW1 75 aa1.63□□□□□ -2.15
PABPN1-204ENST00000554062 CLEC2BQ92478 149 aa1.63□□□□□ -2.15
PABPN1-204ENST00000554062 LINC01600Q96MT4 127 aa1.63□□□□□ -2.15
PABPN1-204ENST00000554062 AMELXQ99217 191 aa1.63□□□□□ -2.15
PABPN1-204ENST00000554062 TMEM242Q9NWH2 141 aa1.63□□□□□ -2.15
PABPN1-204ENST00000554062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.62□□□□□ -2.15
PABPN1-204ENST00000554062 A0A096LNI7 61 aa1.62□□□□□ -2.15
PABPN1-204ENST00000554062 C7orf77A4D0Y5 90 aa1.62□□□□□ -2.15
PABPN1-204ENST00000554062 C9JAW5 83 aa1.62□□□□□ -2.15
PABPN1-204ENST00000554062 K7EMI3 77 aa1.62□□□□□ -2.15
PABPN1-204ENST00000554062 PPP1R17O96001 155 aa1.62□□□□□ -2.15
PABPN1-204ENST00000554062 MGPP08493 103 aa1.62□□□□□ -2.15
PABPN1-204ENST00000554062 CLPSL2Q6UWE3 100 aa1.62□□□□□ -2.15
PABPN1-204ENST00000554062 OBSCN-AS1Q96MR7 158 aa1.62□□□□□ -2.15
PABPN1-204ENST00000554062 SMIM2Q9BVW6 85 aa1.62□□□□□ -2.15
PABPN1-204ENST00000554062 ST20Q9HBF5 79 aa1.62□□□□□ -2.15
PABPN1-204ENST00000554062 MRPL35Q9NZE8 188 aaKnown RBP1.62□□□□□ -2.15
PABPN1-204ENST00000554062 D6R8Y8 96 aa1.61□□□□□ -2.15
PABPN1-204ENST00000554062 UBE2D1P51668 147 aa1.61□□□□□ -2.15
PABPN1-204ENST00000554062 RPL37AP61513 92 aaKnown RBP1.61□□□□□ -2.15
PABPN1-204ENST00000554062 RPL39P62891 51 aaKnown RBP1.61□□□□□ -2.15
PABPN1-204ENST00000554062 COX6A2Q02221 97 aa1.61□□□□□ -2.15
PABPN1-204ENST00000554062 PEA15Q15121 130 aa1.61□□□□□ -2.15
PABPN1-204ENST00000554062 Q6ZUT4 128 aa1.61□□□□□ -2.15
PABPN1-204ENST00000554062 LINC00474Q9P2X8 69 aa1.61□□□□□ -2.15
PABPN1-204ENST00000554062 TMEM218A2RU14 115 aa1.6□□□□□ -2.15
PABPN1-204ENST00000554062 JMJD7-PLA2G4BH0Y9G9 81 aa1.6□□□□□ -2.15
PABPN1-204ENST00000554062 ADIRFQ15847 76 aa1.6□□□□□ -2.15
PABPN1-204ENST00000554062 PYY3Q5JQD4 70 aa1.6□□□□□ -2.15
PABPN1-204ENST00000554062 Q8N8P6 123 aa1.6□□□□□ -2.15
PABPN1-204ENST00000554062 SNHG12Q9BXW3 62 aa1.6□□□□□ -2.15
PABPN1-204ENST00000554062 SEC11CQ9BY50 192 aa1.6□□□□□ -2.15
PABPN1-204ENST00000554062 C6orf48Q9UBA6 75 aa1.6□□□□□ -2.15
PABPN1-204ENST00000554062 TRBV30A0A0K0K1B3 111 aa1.59□□□□□ -2.15
PABPN1-204ENST00000554062 CKS2P33552 79 aa1.59□□□□□ -2.15
PABPN1-204ENST00000554062 SPATA45Q537H7 98 aa1.59□□□□□ -2.15
PABPN1-204ENST00000554062 C9orf116Q5BN46 136 aaPredicted RBP1.59□□□□□ -2.15
PABPN1-204ENST00000554062 MRPL54Q6P161 138 aaKnown RBP1.59□□□□□ -2.15
PABPN1-204ENST00000554062 SPINK6Q6UWN8 80 aa1.59□□□□□ -2.15
PABPN1-204ENST00000554062 MT-ND4LP03901 98 aa1.58□□□□□ -2.16
PABPN1-204ENST00000554062 C5orf38Q86SI9 138 aa1.58□□□□□ -2.16
PABPN1-204ENST00000554062 Q8IZM0 81 aa1.58□□□□□ -2.16
PABPN1-204ENST00000554062 TMEM141Q96I45 108 aa1.58□□□□□ -2.16
PABPN1-204ENST00000554062 PRO1933Q9H354 126 aa1.58□□□□□ -2.16
PABPN1-204ENST00000554062 NXT2Q9NPJ8 142 aaKnown RBP1.58□□□□□ -2.16
PABPN1-204ENST00000554062 LOC107984156A0A0G2JMH3 177 aa1.57□□□□□ -2.16
PABPN1-204ENST00000554062 LINC01549A6NIU2 74 aa1.57□□□□□ -2.16
PABPN1-204ENST00000554062 M0R143 59 aa1.57□□□□□ -2.16
PABPN1-204ENST00000554062 APOC3P02656 99 aa1.57□□□□□ -2.16
PABPN1-204ENST00000554062 IGLC3P0DOY3 106 aa1.57□□□□□ -2.16
PABPN1-204ENST00000554062 FCER1GP30273 86 aa1.57□□□□□ -2.16
PABPN1-204ENST00000554062 IFI27P40305 119 aaPredicted RBP1.57□□□□□ -2.16
PABPN1-204ENST00000554062 SPAG11BQ08648 103 aa1.57□□□□□ -2.16
PABPN1-204ENST00000554062 ARL17AQ8IVW1 177 aa1.57□□□□□ -2.16
PABPN1-204ENST00000554062 CDKN2A-AS1Q9UH64 79 aa1.57□□□□□ -2.16
PABPN1-204ENST00000554062 NDUFA1O15239 70 aa1.56□□□□□ -2.16
PABPN1-204ENST00000554062 CKS1BP61024 79 aa1.56□□□□□ -2.16
PABPN1-204ENST00000554062 Q5XG85 94 aa1.56□□□□□ -2.16
PABPN1-204ENST00000554062 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
PABPN1-204ENST00000554062 SVBPQ8N300 66 aa1.56□□□□□ -2.16
PABPN1-204ENST00000554062 C18orf32Q8TCD1 76 aa1.56□□□□□ -2.16
PABPN1-204ENST00000554062 VPS25Q9BRG1 176 aa1.56□□□□□ -2.16
PABPN1-204ENST00000554062 C20orf202A1L168 122 aa1.55□□□□□ -2.16
PABPN1-204ENST00000554062 A6NN06 94 aa1.55□□□□□ -2.16
PABPN1-204ENST00000554062 F8VRH5 84 aa1.55□□□□□ -2.16
PABPN1-204ENST00000554062 SPRR1AP35321 89 aa1.55□□□□□ -2.16
PABPN1-204ENST00000554062 SEC11AP67812 179 aa1.55□□□□□ -2.16
PABPN1-204ENST00000554062 OCIAD2Q56VL3 154 aa1.55□□□□□ -2.16
PABPN1-204ENST00000554062 C22orf24Q9Y442 160 aa1.55□□□□□ -2.16
PABPN1-204ENST00000554062 J3QR89 54 aa1.54□□□□□ -2.16
PABPN1-204ENST00000554062 NCR3O14931 201 aa1.54□□□□□ -2.16
PABPN1-204ENST00000554062 COX17Q14061 63 aa1.54□□□□□ -2.16
PABPN1-204ENST00000554062 COL5A1-AS1Q5SY13 56 aa1.54□□□□□ -2.16
PABPN1-204ENST00000554062 SMCO4Q9NRQ5 59 aa1.54□□□□□ -2.16
PABPN1-204ENST00000554062 K7ERU9 68 aa1.53□□□□□ -2.16
PABPN1-204ENST00000554062 BCE1O60756 84 aa1.53□□□□□ -2.16
PABPN1-204ENST00000554062 COX7B2Q8TF08 81 aa1.53□□□□□ -2.16
PABPN1-204ENST00000554062 TRAV23DV6A0A075B6W5 121 aa1.52□□□□□ -2.17
PABPN1-204ENST00000554062 SPINK8P0C7L1 97 aa1.52□□□□□ -2.17
PABPN1-204ENST00000554062 PDE6GP18545 87 aa1.52□□□□□ -2.17
PABPN1-204ENST00000554062 SFTA2Q6UW10 78 aa1.52□□□□□ -2.17
PABPN1-204ENST00000554062 KCNQ1DNQ9H478 68 aa1.52□□□□□ -2.17
PABPN1-204ENST00000554062 PMCHL1Q16048 86 aa1.51□□□□□ -2.17
PABPN1-204ENST00000554062 KRTAP19-2Q3LHN2 52 aa1.51□□□□□ -2.17
PABPN1-204ENST00000554062 LINC00575Q6W349 94 aa1.51□□□□□ -2.17
PABPN1-204ENST00000554062 BAGE3Q86Y29 109 aa1.51□□□□□ -2.17
PABPN1-204ENST00000554062 DPH3Q96FX2 82 aa1.51□□□□□ -2.17
PABPN1-204ENST00000554062 ERG28Q9UKR5 140 aa1.51□□□□□ -2.17
PABPN1-204ENST00000554062 USH2AO75445 5202 aa1.5□□□□□ -2.17
PABPN1-204ENST00000554062 SSPOA2VEC9 5147 aa1.5□□□□□ -2.17
PABPN1-204ENST00000554062 RPS29P62273 56 aaKnown RBP1.5□□□□□ -2.17
PABPN1-204ENST00000554062 IFI27L1Q96BM0 104 aa1.5□□□□□ -2.17
PABPN1-204ENST00000554062 SPRR4Q96PI1 79 aa1.5□□□□□ -2.17
PABPN1-204ENST00000554062 TOMM7Q9P0U1 55 aa1.5□□□□□ -2.17
PABPN1-204ENST00000554062 SPRR1BP22528 89 aa1.49□□□□□ -2.17
PABPN1-204ENST00000554062 LINC01545Q5VT33 79 aa1.49□□□□□ -2.17
PABPN1-204ENST00000554062 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
PABPN1-204ENST00000554062 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms