RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PRO0461Q9UI25 63 aa4.25□□□□□ -1.73
ABCD4-220ENST00000553998 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.24□□□□□ -1.73
ABCD4-220ENST00000553998 Q6ZQT0 140 aa4.24□□□□□ -1.73
ABCD4-220ENST00000553998 MTURNQ8N3F0 131 aa4.24□□□□□ -1.73
ABCD4-220ENST00000553998 USH2AO75445 5202 aa4.24□□□□□ -1.73
ABCD4-220ENST00000553998 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
ABCD4-220ENST00000553998 F8W1H4 67 aa4.23□□□□□ -1.73
ABCD4-220ENST00000553998 SMCPP49901 116 aaPredicted RBP4.23□□□□□ -1.73
ABCD4-220ENST00000553998 VPS25Q9BRG1 176 aa4.23□□□□□ -1.73
ABCD4-220ENST00000553998 C14orf132Q9NPU4 83 aa4.23□□□□□ -1.73
ABCD4-220ENST00000553998 Q96NJ1 140 aa4.19□□□□□ -1.74
ABCD4-220ENST00000553998 LINC00472Q9H8W2 130 aa4.19□□□□□ -1.74
ABCD4-220ENST00000553998 J3KT08 172 aa4.17□□□□□ -1.74
ABCD4-220ENST00000553998 A0A1B0GV90 55 aa4.16□□□□□ -1.74
ABCD4-220ENST00000553998 IGKV4-1P06312 121 aa4.16□□□□□ -1.74
ABCD4-220ENST00000553998 ETDBQ3ZM63 59 aa4.16□□□□□ -1.74
ABCD4-220ENST00000553998 PCOTHQ58A44 107 aa4.16□□□□□ -1.74
ABCD4-220ENST00000553998 SIGMAR1Q99720 223 aa4.16□□□□□ -1.74
ABCD4-220ENST00000553998 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
ABCD4-220ENST00000553998 NREPQ16612 68 aa4.15□□□□□ -1.75
ABCD4-220ENST00000553998 C9orf92A6NGG3 77 aa4.14□□□□□ -1.75
ABCD4-220ENST00000553998 M0R2T5 61 aa4.13□□□□□ -1.75
ABCD4-220ENST00000553998 NDUFB1O75438 58 aa4.12□□□□□ -1.75
ABCD4-220ENST00000553998 DEFB116Q30KQ4 102 aa4.12□□□□□ -1.75
ABCD4-220ENST00000553998 A0A1B0GVX0 72 aa4.11□□□□□ -1.75
ABCD4-220ENST00000553998 A8MWP4 228 aa4.11□□□□□ -1.75
ABCD4-220ENST00000553998 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
ABCD4-220ENST00000553998 Q6ZVQ6 151 aa4.11□□□□□ -1.75
ABCD4-220ENST00000553998 UBL5Q9BZL1 73 aa4.11□□□□□ -1.75
ABCD4-220ENST00000553998 ACYP1P07311 99 aa4.1□□□□□ -1.75
ABCD4-220ENST00000553998 LINC00313P59037 77 aa4.1□□□□□ -1.75
ABCD4-220ENST00000553998 LINC00846Q9NV44 126 aa4.1□□□□□ -1.75
ABCD4-220ENST00000553998 IGHV6-1A0A0B4J1U7 121 aa4.09□□□□□ -1.75
ABCD4-220ENST00000553998 FAM240AA0A1B0GVK7 77 aa4.09□□□□□ -1.75
ABCD4-220ENST00000553998 BPY2O14599 106 aa4.09□□□□□ -1.75
ABCD4-220ENST00000553998 RPL37P61927 97 aaKnown RBP4.09□□□□□ -1.75
ABCD4-220ENST00000553998 Q75L30 129 aa4.09□□□□□ -1.75
ABCD4-220ENST00000553998 C20orf166-AS1Q96NR2 134 aa4.09□□□□□ -1.75
ABCD4-220ENST00000553998 IGKV3D-7A0A0C4DH55 119 aa4.08□□□□□ -1.76
ABCD4-220ENST00000553998 DSCR10P59022 87 aa4.08□□□□□ -1.76
ABCD4-220ENST00000553998 PRR15Q8IV56 129 aa4.08□□□□□ -1.76
ABCD4-220ENST00000553998 A8MUU9 505 aa4.07□□□□□ -1.76
ABCD4-220ENST00000553998 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
ABCD4-220ENST00000553998 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
ABCD4-220ENST00000553998 LCE2BO14633 110 aa4.06□□□□□ -1.76
ABCD4-220ENST00000553998 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
ABCD4-220ENST00000553998 NOTCH2NLQ7Z3S9 236 aa4.06□□□□□ -1.76
ABCD4-220ENST00000553998 C8orf17Q9NRJ1 99 aa4.06□□□□□ -1.76
ABCD4-220ENST00000553998 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
ABCD4-220ENST00000553998 J3QR89 54 aa4.04□□□□□ -1.76
ABCD4-220ENST00000553998 K7EQZ3 153 aa4.04□□□□□ -1.76
ABCD4-220ENST00000553998 CXCL6P80162 114 aa4.04□□□□□ -1.76
ABCD4-220ENST00000553998 ATP11AUNQ6ZP68 121 aa4.04□□□□□ -1.76
ABCD4-220ENST00000553998 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
ABCD4-220ENST00000553998 MMP24-AS1A0A0U1RRL7 71 aa4.02□□□□□ -1.77
ABCD4-220ENST00000553998 ATP5EP2Q5VTU8 51 aa4.02□□□□□ -1.77
ABCD4-220ENST00000553998 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
ABCD4-220ENST00000553998 hDV103S1A0JD37 113 aa4.01□□□□□ -1.77
ABCD4-220ENST00000553998 TMEM254Q8TBM7 123 aa4.01□□□□□ -1.77
ABCD4-220ENST00000553998 MRPL34Q9BQ48 92 aaKnown RBP4.01□□□□□ -1.77
ABCD4-220ENST00000553998 LINC00643Q86TS7 51 aa4□□□□□ -1.77
ABCD4-220ENST00000553998 KRTAP19-1Q8IUB9 90 aa4□□□□□ -1.77
ABCD4-220ENST00000553998 Q8N9L7 120 aa4□□□□□ -1.77
ABCD4-220ENST00000553998 HCG22E2RYF7 251 aa3.98□□□□□ -1.77
ABCD4-220ENST00000553998 CASC2Q6XLA1 102 aa3.98□□□□□ -1.77
ABCD4-220ENST00000553998 WFDC13Q8IUB5 93 aa3.97□□□□□ -1.77
ABCD4-220ENST00000553998 ZCCHC13Q8WW36 166 aaKnown RBP3.97□□□□□ -1.77
ABCD4-220ENST00000553998 K7ERU9 68 aa3.96□□□□□ -1.78
ABCD4-220ENST00000553998 NDUFS5O43920 106 aa3.95□□□□□ -1.78
ABCD4-220ENST00000553998 MT2AP02795 61 aa3.93□□□□□ -1.78
ABCD4-220ENST00000553998 HIST1H4AP62805 103 aaKnown RBP3.93□□□□□ -1.78
ABCD4-220ENST00000553998 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
ABCD4-220ENST00000553998 TP53AIP1Q9HCN2 124 aa3.92□□□□□ -1.78
ABCD4-220ENST00000553998 MT1FP04733 61 aa3.9□□□□□ -1.79
ABCD4-220ENST00000553998 SPINK7P58062 85 aa3.9□□□□□ -1.79
ABCD4-220ENST00000553998 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.79
ABCD4-220ENST00000553998 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
ABCD4-220ENST00000553998 Q5W150 140 aa3.89□□□□□ -1.79
ABCD4-220ENST00000553998 IMUPQ9GZP8 106 aa3.89□□□□□ -1.79
ABCD4-220ENST00000553998 A0A087WVE0 104 aa3.88□□□□□ -1.79
ABCD4-220ENST00000553998 HRES1P13985 223 aa3.87□□□□□ -1.79
ABCD4-220ENST00000553998 MPLKIPQ8TAP9 179 aa3.87□□□□□ -1.79
ABCD4-220ENST00000553998 UQCRQO14949 82 aa3.86□□□□□ -1.79
ABCD4-220ENST00000553998 C7orf65Q6ZTY9 151 aa3.86□□□□□ -1.79
ABCD4-220ENST00000553998 RBM12B-AS1Q9P1G2 102 aa3.86□□□□□ -1.79
ABCD4-220ENST00000553998 NEBP20929 6669 aa3.85□□□□□ -1.79
ABCD4-220ENST00000553998 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.79
ABCD4-220ENST00000553998 IGKV2D-30A0A075B6S6 120 aa3.84□□□□□ -1.79
ABCD4-220ENST00000553998 MT-ATP8P03928 68 aa3.84□□□□□ -1.79
ABCD4-220ENST00000553998 IGKV2-30P06310 120 aa3.84□□□□□ -1.79
ABCD4-220ENST00000553998 KRTAP10-10P60014 251 aa3.84□□□□□ -1.79
ABCD4-220ENST00000553998 TRAV22A0A0B4J277 110 aa3.83□□□□□ -1.8
ABCD4-220ENST00000553998 FAM236DA0A1B0GTK5 79 aa3.82□□□□□ -1.8
ABCD4-220ENST00000553998 ATOX1O00244 68 aa3.82□□□□□ -1.8
ABCD4-220ENST00000553998 FAM236CP0DP71 79 aa3.82□□□□□ -1.8
ABCD4-220ENST00000553998 LOC101927531A0A1B0GV80 90 aa3.81□□□□□ -1.8
ABCD4-220ENST00000553998 SCGB1A1P11684 91 aa3.81□□□□□ -1.8
ABCD4-220ENST00000553998 OCR1Q9BZK8 76 aa3.81□□□□□ -1.8
ABCD4-220ENST00000553998 H0Y9P7 68 aa3.79□□□□□ -1.8
ABCD4-220ENST00000553998 SMIM20Q8N5G0 67 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms