RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 C14orf132Q9NPU4 83 aa9.78□□□□□ -0.84
CPSF2-202ENST00000553427 DSCR10P59022 87 aa9.77□□□□□ -0.85
CPSF2-202ENST00000553427 J3KT08 172 aa9.76□□□□□ -0.85
CPSF2-202ENST00000553427 DEFB116Q30KQ4 102 aa9.76□□□□□ -0.85
CPSF2-202ENST00000553427 SPCS1Q9Y6A9 102 aa9.76□□□□□ -0.85
CPSF2-202ENST00000553427 LINC00313P59037 77 aa9.75□□□□□ -0.85
CPSF2-202ENST00000553427 ATP11AUNQ6ZP68 121 aa9.75□□□□□ -0.85
CPSF2-202ENST00000553427 KRTAP16-1A8MUX0 517 aa9.72□□□□□ -0.85
CPSF2-202ENST00000553427 MTURNQ8N3F0 131 aa9.72□□□□□ -0.85
CPSF2-202ENST00000553427 A0A1B0GVX0 72 aa9.71□□□□□ -0.86
CPSF2-202ENST00000553427 KRTAP19-2Q3LHN2 52 aa9.71□□□□□ -0.86
CPSF2-202ENST00000553427 C8orf87E5RJ46 101 aa9.7□□□□□ -0.86
CPSF2-202ENST00000553427 IGHV6-1A0A0B4J1U7 121 aa9.69□□□□□ -0.86
CPSF2-202ENST00000553427 NOTCH2NLQ7Z3S9 236 aa9.68□□□□□ -0.86
CPSF2-202ENST00000553427 K7EP34 96 aa9.65□□□□□ -0.86
CPSF2-202ENST00000553427 PCP4L1A6NKN8 68 aa9.63□□□□□ -0.87
CPSF2-202ENST00000553427 A8MWP4 228 aa9.63□□□□□ -0.87
CPSF2-202ENST00000553427 NDUFB1O75438 58 aa9.63□□□□□ -0.87
CPSF2-202ENST00000553427 PRO0461Q9UI25 63 aa9.63□□□□□ -0.87
CPSF2-202ENST00000553427 NREPQ16612 68 aa9.62□□□□□ -0.87
CPSF2-202ENST00000553427 IGKV3D-7A0A0C4DH55 119 aa9.58□□□□□ -0.88
CPSF2-202ENST00000553427 FLGP20930 4061 aaPredicted RBP9.57□□□□□ -0.88
CPSF2-202ENST00000553427 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
CPSF2-202ENST00000553427 GTF2H5Q6ZYL4 71 aa9.56□□□□□ -0.88
CPSF2-202ENST00000553427 PRR15Q8IV56 129 aa9.55□□□□□ -0.88
CPSF2-202ENST00000553427 C8orf17Q9NRJ1 99 aa9.55□□□□□ -0.88
CPSF2-202ENST00000553427 MT1HP80294 61 aa9.54□□□□□ -0.88
CPSF2-202ENST00000553427 Q8N9P0 234 aaPredicted RBP9.53□□□□□ -0.88
CPSF2-202ENST00000553427 COX6B2Q6YFQ2 88 aa9.51□□□□□ -0.89
CPSF2-202ENST00000553427 F8W1H4 67 aa9.48□□□□□ -0.89
CPSF2-202ENST00000553427 Q6ZVQ6 151 aa9.48□□□□□ -0.89
CPSF2-202ENST00000553427 BPY2O14599 106 aa9.47□□□□□ -0.89
CPSF2-202ENST00000553427 ZCCHC13Q8WW36 166 aaKnown RBP9.47□□□□□ -0.89
CPSF2-202ENST00000553427 MMP24-AS1A0A0U1RRL7 71 aa9.46□□□□□ -0.9
CPSF2-202ENST00000553427 K7EQZ3 153 aa9.45□□□□□ -0.9
CPSF2-202ENST00000553427 TMEM254Q8TBM7 123 aa9.44□□□□□ -0.9
CPSF2-202ENST00000553427 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
CPSF2-202ENST00000553427 MRPL34Q9BQ48 92 aaKnown RBP9.4□□□□□ -0.9
CPSF2-202ENST00000553427 UBL5Q9BZL1 73 aa9.4□□□□□ -0.9
CPSF2-202ENST00000553427 hDV103S1A0JD37 113 aa9.39□□□□□ -0.91
CPSF2-202ENST00000553427 ETDBQ3ZM63 59 aa9.39□□□□□ -0.91
CPSF2-202ENST00000553427 MPLKIPQ8TAP9 179 aa9.39□□□□□ -0.91
CPSF2-202ENST00000553427 HRES1P13985 223 aa9.38□□□□□ -0.91
CPSF2-202ENST00000553427 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
CPSF2-202ENST00000553427 M0R2T5 61 aa9.33□□□□□ -0.92
CPSF2-202ENST00000553427 Q8N9L7 120 aa9.33□□□□□ -0.92
CPSF2-202ENST00000553427 SPINK7P58062 85 aa9.32□□□□□ -0.92
CPSF2-202ENST00000553427 KRTAP10-6P60371 365 aaPredicted RBP9.32□□□□□ -0.92
CPSF2-202ENST00000553427 RBM12B-AS1Q9P1G2 102 aa9.32□□□□□ -0.92
CPSF2-202ENST00000553427 CASC2Q6XLA1 102 aa9.29□□□□□ -0.92
CPSF2-202ENST00000553427 FAM236DA0A1B0GTK5 79 aa9.27□□□□□ -0.93
CPSF2-202ENST00000553427 FAM236CP0DP71 79 aa9.27□□□□□ -0.93
CPSF2-202ENST00000553427 NDUFS5O43920 106 aa9.26□□□□□ -0.93
CPSF2-202ENST00000553427 WFDC13Q8IUB5 93 aa9.26□□□□□ -0.93
CPSF2-202ENST00000553427 CXCL6P80162 114 aa9.25□□□□□ -0.93
CPSF2-202ENST00000553427 HCG22E2RYF7 251 aa9.23□□□□□ -0.93
CPSF2-202ENST00000553427 ACYP1P07311 99 aa9.22□□□□□ -0.93
CPSF2-202ENST00000553427 FAM240AA0A1B0GVK7 77 aa9.21□□□□□ -0.94
CPSF2-202ENST00000553427 Q5W150 140 aa9.17□□□□□ -0.94
CPSF2-202ENST00000553427 A0A1B0GV90 55 aa9.14□□□□□ -0.95
CPSF2-202ENST00000553427 C7orf65Q6ZTY9 151 aa9.13□□□□□ -0.95
CPSF2-202ENST00000553427 ATP5EP2Q5VTU8 51 aa9.11□□□□□ -0.95
CPSF2-202ENST00000553427 IGKV2D-30A0A075B6S6 120 aa9.09□□□□□ -0.95
CPSF2-202ENST00000553427 IGKV2-30P06310 120 aa9.09□□□□□ -0.95
CPSF2-202ENST00000553427 KRTAP9-8Q9BYQ0 159 aa9.07□□□□□ -0.96
CPSF2-202ENST00000553427 TP53AIP1Q9HCN2 124 aa9.07□□□□□ -0.96
CPSF2-202ENST00000553427 KRTAP9-6A0A140TA67 174 aa9.02□□□□□ -0.97
CPSF2-202ENST00000553427 LINC00643Q86TS7 51 aa9□□□□□ -0.97
CPSF2-202ENST00000553427 H1FX-AS1Q4G0G2 97 aa8.99□□□□□ -0.97
CPSF2-202ENST00000553427 MT2AP02795 61 aa8.95□□□□□ -0.98
CPSF2-202ENST00000553427 FSIP2Q5CZC0 6907 aa8.94□□□□□ -0.98
CPSF2-202ENST00000553427 HIST1H4AP62805 103 aaKnown RBP8.94□□□□□ -0.98
CPSF2-202ENST00000553427 J3QR89 54 aa8.91□□□□□ -0.98
CPSF2-202ENST00000553427 C4orf26Q17RF5 130 aa8.91□□□□□ -0.98
CPSF2-202ENST00000553427 TRAV22A0A0B4J277 110 aa8.88□□□□□ -0.99
CPSF2-202ENST00000553427 MT1FP04733 61 aa8.88□□□□□ -0.99
CPSF2-202ENST00000553427 CRCT1Q9UGL9 99 aa8.86□□□□□ -0.99
CPSF2-202ENST00000553427 UQCRQO14949 82 aa8.85□□□□□ -0.99
CPSF2-202ENST00000553427 A0A087WVE0 104 aa8.84□□□□□ -0.99
CPSF2-202ENST00000553427 LOC101927531A0A1B0GV80 90 aa8.83□□□□□ -1
CPSF2-202ENST00000553427 CYP4F30PQ9H0H9 118 aa8.83□□□□□ -1
CPSF2-202ENST00000553427 KRTAP10-10P60014 251 aa8.82□□□□□ -1
CPSF2-202ENST00000553427 USH2AO75445 5202 aa8.81□□□□□ -1
CPSF2-202ENST00000553427 KRTAP3-1Q9BYR8 98 aa8.81□□□□□ -1
CPSF2-202ENST00000553427 ATOX1O00244 68 aa8.79□□□□□ -1
CPSF2-202ENST00000553427 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
CPSF2-202ENST00000553427 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
CPSF2-202ENST00000553427 H0Y9P7 68 aa8.76□□□□□ -1.01
CPSF2-202ENST00000553427 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
CPSF2-202ENST00000553427 S4R3F8 94 aa8.71□□□□□ -1.02
CPSF2-202ENST00000553427 SSPOA2VEC9 5147 aa8.66□□□□□ -1.02
CPSF2-202ENST00000553427 K7ERU9 68 aa8.66□□□□□ -1.02
CPSF2-202ENST00000553427 LCA10Q71F78 164 aa8.65□□□□□ -1.02
CPSF2-202ENST00000553427 MP68P56378 58 aa8.64□□□□□ -1.03
CPSF2-202ENST00000553427 C5orf47Q569G3 176 aa8.64□□□□□ -1.03
CPSF2-202ENST00000553427 H3BS24 57 aa8.63□□□□□ -1.03
CPSF2-202ENST00000553427 CSAG1Q6PB30 78 aa8.63□□□□□ -1.03
CPSF2-202ENST00000553427 IMUPQ9GZP8 106 aa8.63□□□□□ -1.03
CPSF2-202ENST00000553427 LINC00208Q96KT6 92 aa8.62□□□□□ -1.03
CPSF2-202ENST00000553427 H3BPC8 53 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms