RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 FLGP20930 4061 aaPredicted RBP8.23□□□□□ -1.09
CDK4-215ENST00000553237 CRCT1Q9UGL9 99 aa8.21□□□□□ -1.1
CDK4-215ENST00000553237 Q6ZQT0 140 aa8.2□□□□□ -1.1
CDK4-215ENST00000553237 LOC110117498A0A087WWA1 95 aa8.19□□□□□ -1.1
CDK4-215ENST00000553237 C14orf132Q9NPU4 83 aa8.19□□□□□ -1.1
CDK4-215ENST00000553237 LINC00313P59037 77 aa8.18□□□□□ -1.1
CDK4-215ENST00000553237 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
CDK4-215ENST00000553237 FSIP2Q5CZC0 6907 aa8.17□□□□□ -1.1
CDK4-215ENST00000553237 PDE6GP18545 87 aa8.17□□□□□ -1.1
CDK4-215ENST00000553237 MTURNQ8N3F0 131 aa8.16□□□□□ -1.1
CDK4-215ENST00000553237 IGHV6-1A0A0B4J1U7 121 aa8.15□□□□□ -1.1
CDK4-215ENST00000553237 H3BT86 120 aa8.15□□□□□ -1.1
CDK4-215ENST00000553237 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.1
CDK4-215ENST00000553237 A0A1B0GW54 56 aa8.13□□□□□ -1.11
CDK4-215ENST00000553237 COL5A1-AS1Q5SY13 56 aa8.13□□□□□ -1.11
CDK4-215ENST00000553237 SPCS1Q9Y6A9 102 aa8.13□□□□□ -1.11
CDK4-215ENST00000553237 KRTAP16-1A8MUX0 517 aa8.12□□□□□ -1.11
CDK4-215ENST00000553237 J3KT08 172 aa8.12□□□□□ -1.11
CDK4-215ENST00000553237 A0A1B0GVX0 72 aa8.11□□□□□ -1.11
CDK4-215ENST00000553237 C8orf87E5RJ46 101 aa8.08□□□□□ -1.12
CDK4-215ENST00000553237 PCP4L1A6NKN8 68 aa8.06□□□□□ -1.12
CDK4-215ENST00000553237 NDUFB1O75438 58 aa8.06□□□□□ -1.12
CDK4-215ENST00000553237 NREPQ16612 68 aa8.06□□□□□ -1.12
CDK4-215ENST00000553237 A8MWP4 228 aa8.03□□□□□ -1.12
CDK4-215ENST00000553237 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
CDK4-215ENST00000553237 K7EP34 96 aa8.02□□□□□ -1.13
CDK4-215ENST00000553237 IGKV3D-7A0A0C4DH55 119 aa8.01□□□□□ -1.13
CDK4-215ENST00000553237 FAM236DA0A1B0GTK5 79 aa8.01□□□□□ -1.13
CDK4-215ENST00000553237 FAM236CP0DP71 79 aa8.01□□□□□ -1.13
CDK4-215ENST00000553237 C8orf17Q9NRJ1 99 aa7.99□□□□□ -1.13
CDK4-215ENST00000553237 PRO0461Q9UI25 63 aa7.99□□□□□ -1.13
CDK4-215ENST00000553237 HRES1P13985 223 aa7.98□□□□□ -1.13
CDK4-215ENST00000553237 KRTAP9-8Q9BYQ0 159 aa7.98□□□□□ -1.13
CDK4-215ENST00000553237 PRR15Q8IV56 129 aa7.97□□□□□ -1.13
CDK4-215ENST00000553237 RBM12B-AS1Q9P1G2 102 aa7.96□□□□□ -1.14
CDK4-215ENST00000553237 MPLKIPQ8TAP9 179 aa7.95□□□□□ -1.14
CDK4-215ENST00000553237 Q8N9P0 234 aaPredicted RBP7.94□□□□□ -1.14
CDK4-215ENST00000553237 GTF2H5Q6ZYL4 71 aa7.93□□□□□ -1.14
CDK4-215ENST00000553237 Q6ZVQ6 151 aa7.92□□□□□ -1.14
CDK4-215ENST00000553237 ZCCHC13Q8WW36 166 aaKnown RBP7.92□□□□□ -1.14
CDK4-215ENST00000553237 K7EQZ3 153 aa7.91□□□□□ -1.14
CDK4-215ENST00000553237 BPY2O14599 106 aa7.91□□□□□ -1.14
CDK4-215ENST00000553237 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
CDK4-215ENST00000553237 SPINK7P58062 85 aa7.88□□□□□ -1.15
CDK4-215ENST00000553237 F8W1H4 67 aa7.87□□□□□ -1.15
CDK4-215ENST00000553237 TMEM254Q8TBM7 123 aa7.87□□□□□ -1.15
CDK4-215ENST00000553237 MT2AP02795 61 aa7.86□□□□□ -1.15
CDK4-215ENST00000553237 MRPL34Q9BQ48 92 aaKnown RBP7.86□□□□□ -1.15
CDK4-215ENST00000553237 LINC00846Q9NV44 126 aa7.86□□□□□ -1.15
CDK4-215ENST00000553237 hDV103S1A0JD37 113 aa7.85□□□□□ -1.15
CDK4-215ENST00000553237 Q8N9L7 120 aa7.84□□□□□ -1.15
CDK4-215ENST00000553237 UBL5Q9BZL1 73 aa7.83□□□□□ -1.16
CDK4-215ENST00000553237 ETDBQ3ZM63 59 aa7.82□□□□□ -1.16
CDK4-215ENST00000553237 USH2AO75445 5202 aa7.81□□□□□ -1.16
CDK4-215ENST00000553237 MT1FP04733 61 aa7.81□□□□□ -1.16
CDK4-215ENST00000553237 NDUFS5O43920 106 aa7.8□□□□□ -1.16
CDK4-215ENST00000553237 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
CDK4-215ENST00000553237 WFDC13Q8IUB5 93 aa7.78□□□□□ -1.16
CDK4-215ENST00000553237 CASC2Q6XLA1 102 aa7.77□□□□□ -1.17
CDK4-215ENST00000553237 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
CDK4-215ENST00000553237 KRTAP9-3Q9BYQ3 159 aa7.73□□□□□ -1.17
CDK4-215ENST00000553237 LCE2BO14633 110 aa7.72□□□□□ -1.17
CDK4-215ENST00000553237 HCG22E2RYF7 251 aa7.71□□□□□ -1.18
CDK4-215ENST00000553237 Q5W150 140 aa7.7□□□□□ -1.18
CDK4-215ENST00000553237 CXCL6P80162 114 aa7.67□□□□□ -1.18
CDK4-215ENST00000553237 IGKV2D-30A0A075B6S6 120 aa7.65□□□□□ -1.18
CDK4-215ENST00000553237 IGKV2-30P06310 120 aa7.65□□□□□ -1.18
CDK4-215ENST00000553237 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.64□□□□□ -1.19
CDK4-215ENST00000553237 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
CDK4-215ENST00000553237 ACYP1P07311 99 aa7.62□□□□□ -1.19
CDK4-215ENST00000553237 A0A1B0GV90 55 aa7.61□□□□□ -1.19
CDK4-215ENST00000553237 C7orf65Q6ZTY9 151 aa7.61□□□□□ -1.19
CDK4-215ENST00000553237 FAM240AA0A1B0GVK7 77 aa7.59□□□□□ -1.19
CDK4-215ENST00000553237 H1FX-AS1Q4G0G2 97 aa7.59□□□□□ -1.19
CDK4-215ENST00000553237 FCGBPQ9Y6R7 5405 aaPredicted RBP7.58□□□□□ -1.2
CDK4-215ENST00000553237 KRTAP9-7A8MTY7 169 aa7.57□□□□□ -1.2
CDK4-215ENST00000553237 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
CDK4-215ENST00000553237 ATP5EP2Q5VTU8 51 aa7.52□□□□□ -1.21
CDK4-215ENST00000553237 C4orf26Q17RF5 130 aa7.5□□□□□ -1.21
CDK4-215ENST00000553237 HIST1H4AP62805 103 aaKnown RBP7.48□□□□□ -1.21
CDK4-215ENST00000553237 LINC00643Q86TS7 51 aa7.46□□□□□ -1.22
CDK4-215ENST00000553237 KRTAP19-6Q3LI70 58 aa7.43□□□□□ -1.22
CDK4-215ENST00000553237 A0A087WVE0 104 aa7.4□□□□□ -1.22
CDK4-215ENST00000553237 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
CDK4-215ENST00000553237 TRAV22A0A0B4J277 110 aa7.39□□□□□ -1.23
CDK4-215ENST00000553237 C1orf64Q8NEQ6 169 aa7.38□□□□□ -1.23
CDK4-215ENST00000553237 CYP4F30PQ9H0H9 118 aa7.38□□□□□ -1.23
CDK4-215ENST00000553237 J3QR89 54 aa7.37□□□□□ -1.23
CDK4-215ENST00000553237 C5orf47Q569G3 176 aa7.37□□□□□ -1.23
CDK4-215ENST00000553237 UQCRQO14949 82 aa7.36□□□□□ -1.23
CDK4-215ENST00000553237 LOC101927531A0A1B0GV80 90 aa7.34□□□□□ -1.23
CDK4-215ENST00000553237 H0Y9P7 68 aa7.31□□□□□ -1.24
CDK4-215ENST00000553237 S4R3F8 94 aa7.31□□□□□ -1.24
CDK4-215ENST00000553237 FAM236AA0A1B0GUQ0 79 aa7.29□□□□□ -1.24
CDK4-215ENST00000553237 FAM236BA0A1B0GV22 79 aa7.29□□□□□ -1.24
CDK4-215ENST00000553237 ATOX1O00244 68 aa7.29□□□□□ -1.24
CDK4-215ENST00000553237 MACF1Q9UPN3 7388 aaKnown RBP7.29□□□□□ -1.24
CDK4-215ENST00000553237 CSAG1Q6PB30 78 aa7.26□□□□□ -1.25
CDK4-215ENST00000553237 LCA10Q71F78 164 aa7.26□□□□□ -1.25
CDK4-215ENST00000553237 OCR1Q9BZK8 76 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms