RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 A0A087X002 238 aa4.9□□□□□ -1.63
RAB5B-210ENST00000553116 SSBP3-AS1Q7Z2R9 100 aa4.89□□□□□ -1.63
RAB5B-210ENST00000553116 C1orf64Q8NEQ6 169 aa4.89□□□□□ -1.63
RAB5B-210ENST00000553116 LINC00472Q9H8W2 130 aa4.89□□□□□ -1.63
RAB5B-210ENST00000553116 NDUFB1O75438 58 aa4.89□□□□□ -1.63
RAB5B-210ENST00000553116 CDK2AP2O75956 126 aa4.89□□□□□ -1.63
RAB5B-210ENST00000553116 PLA2G1BP04054 148 aaKnown RBP4.89□□□□□ -1.63
RAB5B-210ENST00000553116 WFDC13Q8IUB5 93 aa4.89□□□□□ -1.63
RAB5B-210ENST00000553116 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
RAB5B-210ENST00000553116 TRAV22A0A0B4J277 110 aa4.88□□□□□ -1.63
RAB5B-210ENST00000553116 SPINK6Q6UWN8 80 aa4.88□□□□□ -1.63
RAB5B-210ENST00000553116 HCG22E2RYF7 251 aa4.88□□□□□ -1.63
RAB5B-210ENST00000553116 A8MWP4 228 aa4.87□□□□□ -1.63
RAB5B-210ENST00000553116 CHKB-CPT1BH3BT56 60 aa4.87□□□□□ -1.63
RAB5B-210ENST00000553116 KRTAP13-2Q52LG2 175 aa4.86□□□□□ -1.63
RAB5B-210ENST00000553116 KRTAP1-4P0C5Y4 121 aa4.85□□□□□ -1.63
RAB5B-210ENST00000553116 PRR15Q8IV56 129 aa4.85□□□□□ -1.63
RAB5B-210ENST00000553116 TYMSOSQ8TAI1 123 aa4.85□□□□□ -1.63
RAB5B-210ENST00000553116 IGHV6-1A0A0B4J1U7 121 aa4.84□□□□□ -1.63
RAB5B-210ENST00000553116 NDUFC1O43677 76 aa4.84□□□□□ -1.63
RAB5B-210ENST00000553116 Q96NJ1 140 aa4.84□□□□□ -1.63
RAB5B-210ENST00000553116 CASC2Q6XLA1 102 aa4.84□□□□□ -1.64
RAB5B-210ENST00000553116 APOBP04114 4563 aaKnown RBP4.83□□□□□ -1.64
RAB5B-210ENST00000553116 hDV103S1A0JD37 113 aa4.83□□□□□ -1.64
RAB5B-210ENST00000553116 PRR15LQ9BU68 103 aa4.83□□□□□ -1.64
RAB5B-210ENST00000553116 FAT1Q14517 4588 aa4.82□□□□□ -1.64
RAB5B-210ENST00000553116 OCR1Q9BZK8 76 aa4.82□□□□□ -1.64
RAB5B-210ENST00000553116 RYR3Q15413 4870 aa4.81□□□□□ -1.64
RAB5B-210ENST00000553116 LIMD2Q9BT23 127 aa4.81□□□□□ -1.64
RAB5B-210ENST00000553116 A6NED7 52 aa4.81□□□□□ -1.64
RAB5B-210ENST00000553116 A0A1B0GVX0 72 aa4.8□□□□□ -1.64
RAB5B-210ENST00000553116 ATP5EP56381 51 aaPredicted RBP4.8□□□□□ -1.64
RAB5B-210ENST00000553116 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
RAB5B-210ENST00000553116 MMP24-AS1A0A0U1RRL7 71 aa4.79□□□□□ -1.64
RAB5B-210ENST00000553116 C8orf17Q9NRJ1 99 aa4.79□□□□□ -1.64
RAB5B-210ENST00000553116 NDUFS5O43920 106 aa4.79□□□□□ -1.64
RAB5B-210ENST00000553116 LINC00304Q8N9R0 145 aa4.79□□□□□ -1.64
RAB5B-210ENST00000553116 Q75L30 129 aa4.78□□□□□ -1.64
RAB5B-210ENST00000553116 KRTAP29-1A8MX34 341 aaPredicted RBP4.77□□□□□ -1.65
RAB5B-210ENST00000553116 Q5VV11 94 aa4.77□□□□□ -1.65
RAB5B-210ENST00000553116 SPINK1P00995 79 aa4.77□□□□□ -1.65
RAB5B-210ENST00000553116 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
RAB5B-210ENST00000553116 Q5VSD8 79 aa4.77□□□□□ -1.65
RAB5B-210ENST00000553116 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
RAB5B-210ENST00000553116 KRTAP10-4P60372 401 aaPredicted RBP4.76□□□□□ -1.65
RAB5B-210ENST00000553116 LINC00208Q96KT6 92 aa4.75□□□□□ -1.65
RAB5B-210ENST00000553116 MP68P56378 58 aa4.75□□□□□ -1.65
RAB5B-210ENST00000553116 LCA10Q71F78 164 aa4.75□□□□□ -1.65
RAB5B-210ENST00000553116 SPAG11AQ6PDA7 123 aa4.74□□□□□ -1.65
RAB5B-210ENST00000553116 NOTCH2NLQ7Z3S9 236 aa4.74□□□□□ -1.65
RAB5B-210ENST00000553116 ADM2Q7Z4H4 148 aa4.74□□□□□ -1.65
RAB5B-210ENST00000553116 Q1T7F1 81 aa4.74□□□□□ -1.65
RAB5B-210ENST00000553116 MRPL34Q9BQ48 92 aaKnown RBP4.74□□□□□ -1.65
RAB5B-210ENST00000553116 C8orf87E5RJ46 101 aa4.73□□□□□ -1.65
RAB5B-210ENST00000553116 H0Y9P7 68 aa4.73□□□□□ -1.65
RAB5B-210ENST00000553116 LINC00313P59037 77 aa4.72□□□□□ -1.65
RAB5B-210ENST00000553116 TP53AIP1Q9HCN2 124 aa4.71□□□□□ -1.66
RAB5B-210ENST00000553116 PCOTHQ58A44 107 aa4.71□□□□□ -1.66
RAB5B-210ENST00000553116 FLG2Q5D862 2391 aaPredicted RBP4.7□□□□□ -1.66
RAB5B-210ENST00000553116 HSPG2P98160 4391 aa4.7□□□□□ -1.66
RAB5B-210ENST00000553116 RPS29P62273 56 aaKnown RBP4.69□□□□□ -1.66
RAB5B-210ENST00000553116 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
RAB5B-210ENST00000553116 Q8N9P0 234 aaPredicted RBP4.68□□□□□ -1.66
RAB5B-210ENST00000553116 RYR1P21817 5038 aa4.67□□□□□ -1.66
RAB5B-210ENST00000553116 KRTAP3-3Q9BYR6 98 aa4.67□□□□□ -1.66
RAB5B-210ENST00000553116 KRTAP3-2Q9BYR7 98 aa4.67□□□□□ -1.66
RAB5B-210ENST00000553116 RETNLBQ9BQ08 111 aa4.67□□□□□ -1.66
RAB5B-210ENST00000553116 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
RAB5B-210ENST00000553116 H3BPC8 53 aa4.66□□□□□ -1.66
RAB5B-210ENST00000553116 SPINK7P58062 85 aa4.66□□□□□ -1.66
RAB5B-210ENST00000553116 Q8N1X5 172 aa4.65□□□□□ -1.67
RAB5B-210ENST00000553116 ZCCHC13Q8WW36 166 aaKnown RBP4.65□□□□□ -1.67
RAB5B-210ENST00000553116 A6NN06 94 aa4.64□□□□□ -1.67
RAB5B-210ENST00000553116 EPPK1P58107 5090 aaKnown RBP4.64□□□□□ -1.67
RAB5B-210ENST00000553116 LRP1Q07954 4544 aaKnown RBP4.64□□□□□ -1.67
RAB5B-210ENST00000553116 DMBT1Q9UGM3 2413 aaPredicted RBP4.64□□□□□ -1.67
RAB5B-210ENST00000553116 C9orf92A6NGG3 77 aa4.63□□□□□ -1.67
RAB5B-210ENST00000553116 C7orf65Q6ZTY9 151 aa4.63□□□□□ -1.67
RAB5B-210ENST00000553116 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
RAB5B-210ENST00000553116 COA5Q86WW8 74 aa4.62□□□□□ -1.67
RAB5B-210ENST00000553116 Q5W150 140 aa4.61□□□□□ -1.67
RAB5B-210ENST00000553116 ATP11AUNQ6ZP68 121 aa4.61□□□□□ -1.67
RAB5B-210ENST00000553116 KRTAP17-1Q9BYP8 105 aa4.61□□□□□ -1.67
RAB5B-210ENST00000553116 KRTAP16-1A8MUX0 517 aa4.61□□□□□ -1.67
RAB5B-210ENST00000553116 KRTAP10-8P60410 259 aa4.6□□□□□ -1.67
RAB5B-210ENST00000553116 LOC101927531A0A1B0GV80 90 aa4.59□□□□□ -1.67
RAB5B-210ENST00000553116 MYCBP2O75592 4640 aa4.58□□□□□ -1.68
RAB5B-210ENST00000553116 CYP4F30PQ9H0H9 118 aa4.58□□□□□ -1.68
RAB5B-210ENST00000553116 TNXBP22105 4242 aa4.56□□□□□ -1.68
RAB5B-210ENST00000553116 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
RAB5B-210ENST00000553116 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
RAB5B-210ENST00000553116 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
RAB5B-210ENST00000553116 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
RAB5B-210ENST00000553116 KRTAP13-3Q3SY46 172 aa4.55□□□□□ -1.68
RAB5B-210ENST00000553116 SPANXA2-OT1Q8N9U9 137 aa4.55□□□□□ -1.68
RAB5B-210ENST00000553116 LINC01554Q52M75 96 aa4.53□□□□□ -1.68
RAB5B-210ENST00000553116 IGLV7-46A0A075B6I9 117 aa4.52□□□□□ -1.69
RAB5B-210ENST00000553116 MT1HL1P0DM35 61 aa4.52□□□□□ -1.69
RAB5B-210ENST00000553116 KRTAP4-5Q9BYR2 181 aa4.52□□□□□ -1.69
RAB5B-210ENST00000553116 C20orf166-AS1Q96NR2 134 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms