RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 Q96NJ1 140 aa6.38□□□□□ -1.39
TRAFD1-209ENST00000552896 JMJD7-PLA2G4BH0Y9G9 81 aa6.37□□□□□ -1.39
TRAFD1-209ENST00000552896 COL5A1-AS1Q5SY13 56 aa6.37□□□□□ -1.39
TRAFD1-209ENST00000552896 KRTAP4-11Q9BYQ6 195 aa6.37□□□□□ -1.39
TRAFD1-209ENST00000552896 LOC110117498A0A087WWA1 95 aa6.35□□□□□ -1.39
TRAFD1-209ENST00000552896 H3BT86 120 aa6.35□□□□□ -1.39
TRAFD1-209ENST00000552896 VPS25Q9BRG1 176 aa6.35□□□□□ -1.39
TRAFD1-209ENST00000552896 A0A0U1RQV1 116 aa6.34□□□□□ -1.39
TRAFD1-209ENST00000552896 Q6ZQT0 140 aa6.34□□□□□ -1.39
TRAFD1-209ENST00000552896 OBSCN-AS1Q96MR7 158 aa6.34□□□□□ -1.39
TRAFD1-209ENST00000552896 PDE6GP18545 87 aa6.33□□□□□ -1.4
TRAFD1-209ENST00000552896 SIGMAR1Q99720 223 aa6.33□□□□□ -1.4
TRAFD1-209ENST00000552896 SPCS1Q9Y6A9 102 aa6.33□□□□□ -1.4
TRAFD1-209ENST00000552896 RPL37P61927 97 aaKnown RBP6.32□□□□□ -1.4
TRAFD1-209ENST00000552896 A0A1B0GW54 56 aa6.31□□□□□ -1.4
TRAFD1-209ENST00000552896 KRTAP9-7A8MTY7 169 aa6.31□□□□□ -1.4
TRAFD1-209ENST00000552896 LINC00472Q9H8W2 130 aa6.31□□□□□ -1.4
TRAFD1-209ENST00000552896 C14orf132Q9NPU4 83 aa6.31□□□□□ -1.4
TRAFD1-209ENST00000552896 IGKV4-1P06312 121 aa6.3□□□□□ -1.4
TRAFD1-209ENST00000552896 MTURNQ8N3F0 131 aa6.3□□□□□ -1.4
TRAFD1-209ENST00000552896 PCP4L1A6NKN8 68 aa6.29□□□□□ -1.4
TRAFD1-209ENST00000552896 PCOTHQ58A44 107 aa6.29□□□□□ -1.4
TRAFD1-209ENST00000552896 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
TRAFD1-209ENST00000552896 Q75L30 129 aa6.28□□□□□ -1.4
TRAFD1-209ENST00000552896 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
TRAFD1-209ENST00000552896 K7EP34 96 aa6.27□□□□□ -1.41
TRAFD1-209ENST00000552896 J3KT08 172 aa6.26□□□□□ -1.41
TRAFD1-209ENST00000552896 PCP4P48539 62 aa6.26□□□□□ -1.41
TRAFD1-209ENST00000552896 DEFB116Q30KQ4 102 aa6.25□□□□□ -1.41
TRAFD1-209ENST00000552896 DSCR10P59022 87 aa6.24□□□□□ -1.41
TRAFD1-209ENST00000552896 C20orf166-AS1Q96NR2 134 aa6.24□□□□□ -1.41
TRAFD1-209ENST00000552896 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
TRAFD1-209ENST00000552896 PRO0461Q9UI25 63 aa6.23□□□□□ -1.41
TRAFD1-209ENST00000552896 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
TRAFD1-209ENST00000552896 A8MUU9 505 aa6.22□□□□□ -1.41
TRAFD1-209ENST00000552896 LINC00313P59037 77 aa6.22□□□□□ -1.41
TRAFD1-209ENST00000552896 IGHV6-1A0A0B4J1U7 121 aa6.21□□□□□ -1.42
TRAFD1-209ENST00000552896 C8orf87E5RJ46 101 aa6.21□□□□□ -1.42
TRAFD1-209ENST00000552896 ATP11AUNQ6ZP68 121 aa6.21□□□□□ -1.42
TRAFD1-209ENST00000552896 GTF2H5Q6ZYL4 71 aa6.21□□□□□ -1.42
TRAFD1-209ENST00000552896 KRTAP16-1A8MUX0 517 aa6.2□□□□□ -1.42
TRAFD1-209ENST00000552896 A8MWP4 228 aa6.18□□□□□ -1.42
TRAFD1-209ENST00000552896 NREPQ16612 68 aa6.18□□□□□ -1.42
TRAFD1-209ENST00000552896 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
TRAFD1-209ENST00000552896 NDUFB1O75438 58 aa6.17□□□□□ -1.42
TRAFD1-209ENST00000552896 F8W1H4 67 aa6.14□□□□□ -1.43
TRAFD1-209ENST00000552896 IGKV3D-7A0A0C4DH55 119 aa6.13□□□□□ -1.43
TRAFD1-209ENST00000552896 KRTAP19-2Q3LHN2 52 aa6.13□□□□□ -1.43
TRAFD1-209ENST00000552896 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
TRAFD1-209ENST00000552896 C8orf17Q9NRJ1 99 aa6.12□□□□□ -1.43
TRAFD1-209ENST00000552896 Q6ZVQ6 151 aa6.11□□□□□ -1.43
TRAFD1-209ENST00000552896 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
TRAFD1-209ENST00000552896 BPY2O14599 106 aa6.09□□□□□ -1.43
TRAFD1-209ENST00000552896 K7EQZ3 153 aa6.08□□□□□ -1.44
TRAFD1-209ENST00000552896 ETDBQ3ZM63 59 aa6.08□□□□□ -1.44
TRAFD1-209ENST00000552896 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
TRAFD1-209ENST00000552896 MMP24-AS1A0A0U1RRL7 71 aa6.07□□□□□ -1.44
TRAFD1-209ENST00000552896 UBL5Q9BZL1 73 aa6.07□□□□□ -1.44
TRAFD1-209ENST00000552896 LINC00846Q9NV44 126 aa6.07□□□□□ -1.44
TRAFD1-209ENST00000552896 TMEM254Q8TBM7 123 aa6.06□□□□□ -1.44
TRAFD1-209ENST00000552896 ZCCHC13Q8WW36 166 aaKnown RBP6.05□□□□□ -1.44
TRAFD1-209ENST00000552896 COX6B2Q6YFQ2 88 aa6.04□□□□□ -1.44
TRAFD1-209ENST00000552896 FLGP20930 4061 aaPredicted RBP6.03□□□□□ -1.44
TRAFD1-209ENST00000552896 hDV103S1A0JD37 113 aa6.03□□□□□ -1.44
TRAFD1-209ENST00000552896 MRPL34Q9BQ48 92 aaKnown RBP6.03□□□□□ -1.44
TRAFD1-209ENST00000552896 MT1HP80294 61 aa6.02□□□□□ -1.45
TRAFD1-209ENST00000552896 Q8N9L7 120 aa6.01□□□□□ -1.45
TRAFD1-209ENST00000552896 A0A1B0GV90 55 aa5.98□□□□□ -1.45
TRAFD1-209ENST00000552896 FAM240AA0A1B0GVK7 77 aa5.98□□□□□ -1.45
TRAFD1-209ENST00000552896 CXCL6P80162 114 aa5.97□□□□□ -1.45
TRAFD1-209ENST00000552896 CASC2Q6XLA1 102 aa5.97□□□□□ -1.45
TRAFD1-209ENST00000552896 NDUFS5O43920 106 aa5.96□□□□□ -1.46
TRAFD1-209ENST00000552896 ACYP1P07311 99 aa5.96□□□□□ -1.46
TRAFD1-209ENST00000552896 HRES1P13985 223 aa5.96□□□□□ -1.46
TRAFD1-209ENST00000552896 WFDC13Q8IUB5 93 aa5.96□□□□□ -1.46
TRAFD1-209ENST00000552896 MPLKIPQ8TAP9 179 aa5.96□□□□□ -1.46
TRAFD1-209ENST00000552896 HCG22E2RYF7 251 aa5.94□□□□□ -1.46
TRAFD1-209ENST00000552896 RBM12B-AS1Q9P1G2 102 aa5.94□□□□□ -1.46
TRAFD1-209ENST00000552896 SPINK7P58062 85 aa5.93□□□□□ -1.46
TRAFD1-209ENST00000552896 FAM236DA0A1B0GTK5 79 aa5.91□□□□□ -1.46
TRAFD1-209ENST00000552896 FAM236CP0DP71 79 aa5.91□□□□□ -1.46
TRAFD1-209ENST00000552896 ATP5EP2Q5VTU8 51 aa5.91□□□□□ -1.46
TRAFD1-209ENST00000552896 M0R2T5 61 aa5.9□□□□□ -1.46
TRAFD1-209ENST00000552896 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
TRAFD1-209ENST00000552896 Q5W150 140 aa5.87□□□□□ -1.47
TRAFD1-209ENST00000552896 C7orf65Q6ZTY9 151 aa5.86□□□□□ -1.47
TRAFD1-209ENST00000552896 IGKV2D-30A0A075B6S6 120 aa5.83□□□□□ -1.48
TRAFD1-209ENST00000552896 IGKV2-30P06310 120 aa5.83□□□□□ -1.48
TRAFD1-209ENST00000552896 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
TRAFD1-209ENST00000552896 LINC00643Q86TS7 51 aa5.82□□□□□ -1.48
TRAFD1-209ENST00000552896 J3QR89 54 aa5.8□□□□□ -1.48
TRAFD1-209ENST00000552896 HIST1H4AP62805 103 aaKnown RBP5.79□□□□□ -1.48
TRAFD1-209ENST00000552896 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
TRAFD1-209ENST00000552896 SCGB1A1P11684 91 aa5.74□□□□□ -1.49
TRAFD1-209ENST00000552896 A0A087WVE0 104 aa5.73□□□□□ -1.49
TRAFD1-209ENST00000552896 TRAV22A0A0B4J277 110 aa5.73□□□□□ -1.49
TRAFD1-209ENST00000552896 H1FX-AS1Q4G0G2 97 aa5.72□□□□□ -1.49
TRAFD1-209ENST00000552896 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.5
TRAFD1-209ENST00000552896 C4orf26Q17RF5 130 aa5.7□□□□□ -1.5
TRAFD1-209ENST00000552896 UQCRQO14949 82 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms