RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 LINC00313P59037 77 aa6.1□□□□□ -1.43
RFX4-210ENST00000552773 SPINK1P00995 79 aa6.09□□□□□ -1.43
RFX4-210ENST00000552773 LYSTQ99698 3801 aa6.09□□□□□ -1.44
RFX4-210ENST00000552773 RPS29P62273 56 aaKnown RBP6.08□□□□□ -1.44
RFX4-210ENST00000552773 SPAG11AQ6PDA7 123 aa6.08□□□□□ -1.44
RFX4-210ENST00000552773 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
RFX4-210ENST00000552773 PRKDCP78527 4128 aaKnown RBP6.08□□□□□ -1.44
RFX4-210ENST00000552773 STARD9Q9P2P6 4700 aa6.07□□□□□ -1.44
RFX4-210ENST00000552773 MEGF8Q7Z7M0 2845 aa6.07□□□□□ -1.44
RFX4-210ENST00000552773 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
RFX4-210ENST00000552773 PLA2G1BP04054 148 aaKnown RBP6.05□□□□□ -1.44
RFX4-210ENST00000552773 PRR4Q16378 134 aa6.05□□□□□ -1.44
RFX4-210ENST00000552773 TYMSOSQ8TAI1 123 aa6.05□□□□□ -1.44
RFX4-210ENST00000552773 A0A087X002 238 aa6.04□□□□□ -1.44
RFX4-210ENST00000552773 KRTAP13-2Q52LG2 175 aa6.04□□□□□ -1.44
RFX4-210ENST00000552773 DNAH6Q9C0G6 4158 aa6.03□□□□□ -1.44
RFX4-210ENST00000552773 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
RFX4-210ENST00000552773 KRTAP1-4P0C5Y4 121 aa6.02□□□□□ -1.45
RFX4-210ENST00000552773 PCOTHQ58A44 107 aa6.02□□□□□ -1.45
RFX4-210ENST00000552773 DNAH17Q9UFH2 4485 aa6.01□□□□□ -1.45
RFX4-210ENST00000552773 COA5Q86WW8 74 aa6.01□□□□□ -1.45
RFX4-210ENST00000552773 ACYP2P14621 99 aa5.99□□□□□ -1.45
RFX4-210ENST00000552773 NOTCH2NLQ7Z3S9 236 aa5.99□□□□□ -1.45
RFX4-210ENST00000552773 ALMS1Q8TCU4 4167 aa5.99□□□□□ -1.45
RFX4-210ENST00000552773 SRRM2Q9UQ35 2752 aaKnown RBP5.98□□□□□ -1.45
RFX4-210ENST00000552773 LINC00304Q8N9R0 145 aa5.98□□□□□ -1.45
RFX4-210ENST00000552773 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
RFX4-210ENST00000552773 TGP01266 2768 aa5.97□□□□□ -1.45
RFX4-210ENST00000552773 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
RFX4-210ENST00000552773 FBN3Q75N90 2809 aa5.97□□□□□ -1.45
RFX4-210ENST00000552773 HECTD4Q9Y4D8 3996 aa5.96□□□□□ -1.46
RFX4-210ENST00000552773 DNAH2Q9P225 4427 aa5.94□□□□□ -1.46
RFX4-210ENST00000552773 IGKV2-30P06310 120 aa5.94□□□□□ -1.46
RFX4-210ENST00000552773 KMT2AQ03164 3969 aa5.93□□□□□ -1.46
RFX4-210ENST00000552773 Q5W150 140 aa5.93□□□□□ -1.46
RFX4-210ENST00000552773 CHKB-CPT1BH3BT56 60 aa5.91□□□□□ -1.46
RFX4-210ENST00000552773 KRTAP16-1A8MUX0 517 aa5.91□□□□□ -1.46
RFX4-210ENST00000552773 PSPHP1O15172 72 aa5.91□□□□□ -1.46
RFX4-210ENST00000552773 DMAC1Q96GE9 116 aa5.91□□□□□ -1.46
RFX4-210ENST00000552773 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
RFX4-210ENST00000552773 A0A1B0GVY2 172 aa5.9□□□□□ -1.47
RFX4-210ENST00000552773 HRES1P13985 223 aa5.9□□□□□ -1.47
RFX4-210ENST00000552773 LCE2BO14633 110 aa5.89□□□□□ -1.47
RFX4-210ENST00000552773 Q75L30 129 aa5.89□□□□□ -1.47
RFX4-210ENST00000552773 PRR15LQ9BU68 103 aa5.89□□□□□ -1.47
RFX4-210ENST00000552773 A8MUN3 132 aa5.88□□□□□ -1.47
RFX4-210ENST00000552773 PRR26Q8N8Z3 221 aa5.88□□□□□ -1.47
RFX4-210ENST00000552773 DNAH8Q96JB1 4490 aa5.87□□□□□ -1.47
RFX4-210ENST00000552773 Q5VV11 94 aa5.86□□□□□ -1.47
RFX4-210ENST00000552773 C7orf65Q6ZTY9 151 aa5.85□□□□□ -1.47
RFX4-210ENST00000552773 DNHD1Q96M86 4753 aa5.85□□□□□ -1.47
RFX4-210ENST00000552773 IGKV2D-30A0A075B6S6 120 aa5.82□□□□□ -1.48
RFX4-210ENST00000552773 A6NED7 52 aa5.82□□□□□ -1.48
RFX4-210ENST00000552773 SMR3BP02814 79 aaPredicted RBP5.82□□□□□ -1.48
RFX4-210ENST00000552773 SPTSSBQ8NFR3 76 aa5.82□□□□□ -1.48
RFX4-210ENST00000552773 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
RFX4-210ENST00000552773 RETNLBQ9BQ08 111 aa5.8□□□□□ -1.48
RFX4-210ENST00000552773 DNAH5Q8TE73 4624 aa5.79□□□□□ -1.48
RFX4-210ENST00000552773 C20orf166-AS1Q96NR2 134 aa5.79□□□□□ -1.48
RFX4-210ENST00000552773 DNAH11Q96DT5 4516 aa5.78□□□□□ -1.48
RFX4-210ENST00000552773 A8MUU9 505 aa5.77□□□□□ -1.49
RFX4-210ENST00000552773 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
RFX4-210ENST00000552773 ATP11AUNQ6ZP68 121 aa5.77□□□□□ -1.49
RFX4-210ENST00000552773 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
RFX4-210ENST00000552773 PKD1P98161 4303 aa5.76□□□□□ -1.49
RFX4-210ENST00000552773 A0A1B0GU69 56 aa5.75□□□□□ -1.49
RFX4-210ENST00000552773 FAT2Q9NYQ8 4349 aa5.74□□□□□ -1.49
RFX4-210ENST00000552773 SEC61GP60059 68 aa5.72□□□□□ -1.49
RFX4-210ENST00000552773 LRP1BQ9NZR2 4599 aa5.7□□□□□ -1.5
RFX4-210ENST00000552773 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
RFX4-210ENST00000552773 C9orf92A6NGG3 77 aa5.67□□□□□ -1.5
RFX4-210ENST00000552773 UQCR11O14957 56 aa5.66□□□□□ -1.5
RFX4-210ENST00000552773 VPS13BQ7Z7G8 4022 aa5.66□□□□□ -1.5
RFX4-210ENST00000552773 Q5VSD8 79 aa5.66□□□□□ -1.5
RFX4-210ENST00000552773 KRTAP10-8P60410 259 aa5.65□□□□□ -1.51
RFX4-210ENST00000552773 LCA10Q71F78 164 aa5.65□□□□□ -1.51
RFX4-210ENST00000552773 HYDINQ4G0P3 5121 aa5.65□□□□□ -1.51
RFX4-210ENST00000552773 SPINK7P58062 85 aa5.63□□□□□ -1.51
RFX4-210ENST00000552773 LCE2CQ5TA81 110 aa5.63□□□□□ -1.51
RFX4-210ENST00000552773 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
RFX4-210ENST00000552773 SPATA8Q6RVD6 105 aa5.59□□□□□ -1.51
RFX4-210ENST00000552773 Q8N1X5 172 aa5.59□□□□□ -1.51
RFX4-210ENST00000552773 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.52
RFX4-210ENST00000552773 SACSQ9NZJ4 4579 aa5.58□□□□□ -1.52
RFX4-210ENST00000552773 COX6B2Q6YFQ2 88 aa5.58□□□□□ -1.52
RFX4-210ENST00000552773 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
RFX4-210ENST00000552773 RPL37P61927 97 aaKnown RBP5.56□□□□□ -1.52
RFX4-210ENST00000552773 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
RFX4-210ENST00000552773 DYNC1H1Q14204 4646 aaKnown RBP5.55□□□□□ -1.52
RFX4-210ENST00000552773 A6NN06 94 aa5.53□□□□□ -1.52
RFX4-210ENST00000552773 PKHD1P08F94 4074 aa5.52□□□□□ -1.53
RFX4-210ENST00000552773 A8MU10 97 aa5.5□□□□□ -1.53
RFX4-210ENST00000552773 FLG2Q5D862 2391 aaPredicted RBP5.5□□□□□ -1.53
RFX4-210ENST00000552773 APOBP04114 4563 aaKnown RBP5.49□□□□□ -1.53
RFX4-210ENST00000552773 LORP23490 312 aaPredicted RBP5.48□□□□□ -1.53
RFX4-210ENST00000552773 PKHD1L1Q86WI1 4243 aa5.48□□□□□ -1.53
RFX4-210ENST00000552773 XP32Q5T750 250 aa5.47□□□□□ -1.53
RFX4-210ENST00000552773 KRTAP3-1Q9BYR8 98 aa5.46□□□□□ -1.54
RFX4-210ENST00000552773 A0A1B0GU33 70 aa5.45□□□□□ -1.54
RFX4-210ENST00000552773 RYR2Q92736 4967 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms