RNA–Protein interactions for RNA: ENST00000552495.1

RITA1-203, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

TSL 2 BASIC

Gene RITA1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-203ENST00000552495 FAM236CP0DP71 79 aa13.5□□□□□ -0.25
RITA1-203ENST00000552495 MP68P56378 58 aa13.5□□□□□ -0.25
RITA1-203ENST00000552495 LIMD2Q9BT23 127 aa13.5□□□□□ -0.25
RITA1-203ENST00000552495 C4orf48Q5BLP8 95 aa13.5□□□□□ -0.25
RITA1-203ENST00000552495 ZCCHC13Q8WW36 166 aaKnown RBP13.46□□□□□ -0.26
RITA1-203ENST00000552495 TP53AIP1Q9HCN2 124 aa13.46□□□□□ -0.26
RITA1-203ENST00000552495 MRPL34Q9BQ48 92 aaKnown RBP13.44□□□□□ -0.26
RITA1-203ENST00000552495 C1orf195Q5TG92 126 aa13.44□□□□□ -0.26
RITA1-203ENST00000552495 SPINK1P00995 79 aa13.43□□□□□ -0.26
RITA1-203ENST00000552495 RPS28P62857 69 aaKnown RBP13.43□□□□□ -0.26
RITA1-203ENST00000552495 H0Y9P7 68 aa13.42□□□□□ -0.26
RITA1-203ENST00000552495 H3BPC8 53 aa13.42□□□□□ -0.26
RITA1-203ENST00000552495 KRTAP10-4P60372 401 aaPredicted RBP13.42□□□□□ -0.26
RITA1-203ENST00000552495 ATP5EP56381 51 aaPredicted RBP13.42□□□□□ -0.26
RITA1-203ENST00000552495 NOTCH2NLQ7Z3S9 236 aa13.42□□□□□ -0.26
RITA1-203ENST00000552495 C8orf87E5RJ46 101 aa13.41□□□□□ -0.26
RITA1-203ENST00000552495 PRR26Q8N8Z3 221 aa13.4□□□□□ -0.26
RITA1-203ENST00000552495 TRAV22A0A0B4J277 110 aa13.38□□□□□ -0.27
RITA1-203ENST00000552495 LINC00208Q96KT6 92 aa13.38□□□□□ -0.27
RITA1-203ENST00000552495 NDUFS5O43920 106 aa13.38□□□□□ -0.27
RITA1-203ENST00000552495 FAT1Q14517 4588 aa13.36□□□□□ -0.27
RITA1-203ENST00000552495 SPAG11AQ6PDA7 123 aa13.36□□□□□ -0.27
RITA1-203ENST00000552495 LINC00304Q8N9R0 145 aa13.36□□□□□ -0.27
RITA1-203ENST00000552495 RPS29P62273 56 aaKnown RBP13.33□□□□□ -0.27
RITA1-203ENST00000552495 LINC00313P59037 77 aa13.32□□□□□ -0.28
RITA1-203ENST00000552495 C1orf64Q8NEQ6 169 aa13.3□□□□□ -0.28
RITA1-203ENST00000552495 SERP1Q9Y6X1 66 aa13.3□□□□□ -0.28
RITA1-203ENST00000552495 FAM229AH3BQW9 127 aa13.28□□□□□ -0.28
RITA1-203ENST00000552495 RYR3Q15413 4870 aa13.23□□□□□ -0.29
RITA1-203ENST00000552495 OXTP01178 125 aa13.19□□□□□ -0.3
RITA1-203ENST00000552495 Q8N9P0 234 aaPredicted RBP13.17□□□□□ -0.3
RITA1-203ENST00000552495 PKHD1L1Q86WI1 4243 aa13.15□□□□□ -0.3
RITA1-203ENST00000552495 SPANXA2-OT1Q8N9U9 137 aa13.14□□□□□ -0.31
RITA1-203ENST00000552495 KRTAP16-1A8MUX0 517 aa13.12□□□□□ -0.31
RITA1-203ENST00000552495 Q5VSD8 79 aa13.12□□□□□ -0.31
RITA1-203ENST00000552495 CYP4F30PQ9H0H9 118 aa13.12□□□□□ -0.31
RITA1-203ENST00000552495 Q5W150 140 aa13.1□□□□□ -0.31
RITA1-203ENST00000552495 HSPG2P98160 4391 aa13.09□□□□□ -0.31
RITA1-203ENST00000552495 KRTAP13-3Q3SY46 172 aa13.09□□□□□ -0.31
RITA1-203ENST00000552495 LOC101927531A0A1B0GV80 90 aa13.08□□□□□ -0.32
RITA1-203ENST00000552495 PRR4Q16378 134 aa13.06□□□□□ -0.32
RITA1-203ENST00000552495 PCOTHQ58A44 107 aa13.04□□□□□ -0.32
RITA1-203ENST00000552495 SMIM26A0A096LP01 95 aa13.01□□□□□ -0.33
RITA1-203ENST00000552495 IGLV7-46A0A075B6I9 117 aa13□□□□□ -0.33
RITA1-203ENST00000552495 RYR1P21817 5038 aa12.98□□□□□ -0.33
RITA1-203ENST00000552495 KRTAP10-8P60410 259 aa12.95□□□□□ -0.34
RITA1-203ENST00000552495 RETNLBQ9BQ08 111 aa12.93□□□□□ -0.34
RITA1-203ENST00000552495 Q8N1X5 172 aa12.91□□□□□ -0.34
RITA1-203ENST00000552495 IGKV2-30P06310 120 aa12.87□□□□□ -0.35
RITA1-203ENST00000552495 FP248Q71RG6 208 aaPredicted RBP12.87□□□□□ -0.35
RITA1-203ENST00000552495 TNXBP22105 4242 aa12.85□□□□□ -0.35
RITA1-203ENST00000552495 KRTAP17-1Q9BYP8 105 aa12.84□□□□□ -0.35
RITA1-203ENST00000552495 C9orf92A6NGG3 77 aa12.83□□□□□ -0.36
RITA1-203ENST00000552495 FLG2Q5D862 2391 aaPredicted RBP12.83□□□□□ -0.36
RITA1-203ENST00000552495 LRP1Q07954 4544 aaKnown RBP12.82□□□□□ -0.36
RITA1-203ENST00000552495 C20orf166-AS1Q96NR2 134 aa12.79□□□□□ -0.36
RITA1-203ENST00000552495 KIAA1109Q2LD37 5005 aa12.79□□□□□ -0.36
RITA1-203ENST00000552495 A8MUU9 505 aa12.77□□□□□ -0.37
RITA1-203ENST00000552495 HRES1P13985 223 aa12.76□□□□□ -0.37
RITA1-203ENST00000552495 C4orf26Q17RF5 130 aa12.76□□□□□ -0.37
RITA1-203ENST00000552495 COA5Q86WW8 74 aa12.76□□□□□ -0.37
RITA1-203ENST00000552495 IGKV2D-30A0A075B6S6 120 aa12.75□□□□□ -0.37
RITA1-203ENST00000552495 FAT3Q8TDW7 4589 aa12.74□□□□□ -0.37
RITA1-203ENST00000552495 MPLKIPQ8TAP9 179 aa12.73□□□□□ -0.37
RITA1-203ENST00000552495 EPPK1P58107 5090 aaKnown RBP12.73□□□□□ -0.37
RITA1-203ENST00000552495 C7orf65Q6ZTY9 151 aa12.67□□□□□ -0.38
RITA1-203ENST00000552495 Q1T7F1 81 aa12.66□□□□□ -0.38
RITA1-203ENST00000552495 MT1HL1P0DM35 61 aa12.65□□□□□ -0.38
RITA1-203ENST00000552495 ACYP2P14621 99 aa12.65□□□□□ -0.38
RITA1-203ENST00000552495 DMAC1Q96GE9 116 aa12.64□□□□□ -0.39
RITA1-203ENST00000552495 Q75L30 129 aa12.62□□□□□ -0.39
RITA1-203ENST00000552495 V9GYY9 64 aa12.61□□□□□ -0.39
RITA1-203ENST00000552495 DMBT1Q9UGM3 2413 aaPredicted RBP12.58□□□□□ -0.4
RITA1-203ENST00000552495 MYCBP2O75592 4640 aa12.55□□□□□ -0.4
RITA1-203ENST00000552495 CHKB-CPT1BH3BT56 60 aa12.47□□□□□ -0.41
RITA1-203ENST00000552495 ATP11AUNQ6ZP68 121 aa12.44□□□□□ -0.42
RITA1-203ENST00000552495 SPINK7P58062 85 aa12.44□□□□□ -0.42
RITA1-203ENST00000552495 A8MUN3 132 aa12.42□□□□□ -0.42
RITA1-203ENST00000552495 PSPHP1O15172 72 aa12.42□□□□□ -0.42
RITA1-203ENST00000552495 RPL37P61927 97 aaKnown RBP12.42□□□□□ -0.42
RITA1-203ENST00000552495 KRTAP4-5Q9BYR2 181 aa12.42□□□□□ -0.42
RITA1-203ENST00000552495 XP32Q5T750 250 aa12.41□□□□□ -0.42
RITA1-203ENST00000552495 LINC01558Q9Y6Z2 57 aa12.36□□□□□ -0.43
RITA1-203ENST00000552495 PRR15LQ9BU68 103 aa12.34□□□□□ -0.43
RITA1-203ENST00000552495 Q5VV11 94 aa12.29□□□□□ -0.44
RITA1-203ENST00000552495 TPRXLQ17RH7 258 aa12.27□□□□□ -0.45
RITA1-203ENST00000552495 BRK1Q8WUW1 75 aa12.21□□□□□ -0.45
RITA1-203ENST00000552495 COX6B2Q6YFQ2 88 aa12.19□□□□□ -0.46
RITA1-203ENST00000552495 KRTAP3-1Q9BYR8 98 aa12.19□□□□□ -0.46
RITA1-203ENST00000552495 J3QL48 77 aa12.14□□□□□ -0.47
RITA1-203ENST00000552495 SPTSSBQ8NFR3 76 aa12.13□□□□□ -0.47
RITA1-203ENST00000552495 PRO0628Q9UI54 55 aa12.13□□□□□ -0.47
RITA1-203ENST00000552495 BIRC6Q9NR09 4857 aa12.11□□□□□ -0.47
RITA1-203ENST00000552495 ABCA13Q86UQ4 5058 aa12.1□□□□□ -0.47
RITA1-203ENST00000552495 A0A1B0GU69 56 aa12.08□□□□□ -0.48
RITA1-203ENST00000552495 HERC2O95714 4834 aa12.07□□□□□ -0.48
RITA1-203ENST00000552495 A6NED7 52 aa12.05□□□□□ -0.48
RITA1-203ENST00000552495 SVIPQ8NHG7 77 aa11.97□□□□□ -0.49
RITA1-203ENST00000552495 LRP2P98164 4655 aa11.96□□□□□ -0.5
RITA1-203ENST00000552495 LPAP08519 4548 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms