RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 A0A1B0GW54 56 aa9.84□□□□□ -0.83
PRPF40B-216ENST00000552301 LINC00313P59037 77 aa9.83□□□□□ -0.84
PRPF40B-216ENST00000552301 LCE2AQ5TA79 106 aaPredicted RBP9.83□□□□□ -0.84
PRPF40B-216ENST00000552301 PCP4L1A6NKN8 68 aa9.82□□□□□ -0.84
PRPF40B-216ENST00000552301 J3KT08 172 aa9.82□□□□□ -0.84
PRPF40B-216ENST00000552301 IGHV6-1A0A0B4J1U7 121 aa9.81□□□□□ -0.84
PRPF40B-216ENST00000552301 C20orf166-AS1Q96NR2 134 aa9.8□□□□□ -0.84
PRPF40B-216ENST00000552301 A8MUU9 505 aa9.78□□□□□ -0.84
PRPF40B-216ENST00000552301 A0A1B0GVX0 72 aa9.77□□□□□ -0.85
PRPF40B-216ENST00000552301 C8orf87E5RJ46 101 aa9.76□□□□□ -0.85
PRPF40B-216ENST00000552301 NDUFB1O75438 58 aa9.76□□□□□ -0.85
PRPF40B-216ENST00000552301 KRTAP9-2Q9BYQ4 174 aa9.76□□□□□ -0.85
PRPF40B-216ENST00000552301 K7EP34 96 aa9.73□□□□□ -0.85
PRPF40B-216ENST00000552301 NREPQ16612 68 aa9.73□□□□□ -0.85
PRPF40B-216ENST00000552301 NOTCH2NLQ7Z3S9 236 aa9.72□□□□□ -0.85
PRPF40B-216ENST00000552301 KRTAP16-1A8MUX0 517 aa9.71□□□□□ -0.86
PRPF40B-216ENST00000552301 A8MWP4 228 aa9.68□□□□□ -0.86
PRPF40B-216ENST00000552301 GTF2H5Q6ZYL4 71 aa9.68□□□□□ -0.86
PRPF40B-216ENST00000552301 SMCPP49901 116 aaPredicted RBP9.67□□□□□ -0.86
PRPF40B-216ENST00000552301 COX6B2Q6YFQ2 88 aa9.66□□□□□ -0.86
PRPF40B-216ENST00000552301 PRO0461Q9UI25 63 aa9.64□□□□□ -0.87
PRPF40B-216ENST00000552301 KRTAP19-2Q3LHN2 52 aa9.63□□□□□ -0.87
PRPF40B-216ENST00000552301 IGKV3D-7A0A0C4DH55 119 aa9.62□□□□□ -0.87
PRPF40B-216ENST00000552301 C8orf17Q9NRJ1 99 aa9.62□□□□□ -0.87
PRPF40B-216ENST00000552301 LCE2CQ5TA81 110 aa9.61□□□□□ -0.87
PRPF40B-216ENST00000552301 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
PRPF40B-216ENST00000552301 BPY2O14599 106 aa9.57□□□□□ -0.88
PRPF40B-216ENST00000552301 F8W1H4 67 aa9.55□□□□□ -0.88
PRPF40B-216ENST00000552301 Q6ZVQ6 151 aa9.55□□□□□ -0.88
PRPF40B-216ENST00000552301 MT1HP80294 61 aa9.53□□□□□ -0.88
PRPF40B-216ENST00000552301 K7EQZ3 153 aa9.52□□□□□ -0.89
PRPF40B-216ENST00000552301 Q8N9P0 234 aaPredicted RBP9.52□□□□□ -0.89
PRPF40B-216ENST00000552301 ZCCHC13Q8WW36 166 aaKnown RBP9.52□□□□□ -0.89
PRPF40B-216ENST00000552301 UBL5Q9BZL1 73 aa9.51□□□□□ -0.89
PRPF40B-216ENST00000552301 MMP24-AS1A0A0U1RRL7 71 aa9.5□□□□□ -0.89
PRPF40B-216ENST00000552301 KRTAP9-6A0A140TA67 174 aa9.5□□□□□ -0.89
PRPF40B-216ENST00000552301 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
PRPF40B-216ENST00000552301 M0R2T5 61 aa9.48□□□□□ -0.89
PRPF40B-216ENST00000552301 ETDBQ3ZM63 59 aa9.48□□□□□ -0.89
PRPF40B-216ENST00000552301 MRPL34Q9BQ48 92 aaKnown RBP9.48□□□□□ -0.89
PRPF40B-216ENST00000552301 hDV103S1A0JD37 113 aa9.47□□□□□ -0.89
PRPF40B-216ENST00000552301 LINC00846Q9NV44 126 aa9.47□□□□□ -0.89
PRPF40B-216ENST00000552301 FAM236DA0A1B0GTK5 79 aa9.44□□□□□ -0.9
PRPF40B-216ENST00000552301 NDUFS5O43920 106 aa9.44□□□□□ -0.9
PRPF40B-216ENST00000552301 FAM236CP0DP71 79 aa9.44□□□□□ -0.9
PRPF40B-216ENST00000552301 Q8N9L7 120 aa9.43□□□□□ -0.9
PRPF40B-216ENST00000552301 RBM12B-AS1Q9P1G2 102 aa9.42□□□□□ -0.9
PRPF40B-216ENST00000552301 WFDC13Q8IUB5 93 aa9.4□□□□□ -0.9
PRPF40B-216ENST00000552301 HRES1P13985 223 aa9.39□□□□□ -0.91
PRPF40B-216ENST00000552301 SPINK7P58062 85 aa9.38□□□□□ -0.91
PRPF40B-216ENST00000552301 CASC2Q6XLA1 102 aa9.38□□□□□ -0.91
PRPF40B-216ENST00000552301 FLGP20930 4061 aaPredicted RBP9.35□□□□□ -0.91
PRPF40B-216ENST00000552301 KRTAP10-6P60371 365 aaPredicted RBP9.32□□□□□ -0.92
PRPF40B-216ENST00000552301 MPLKIPQ8TAP9 179 aa9.32□□□□□ -0.92
PRPF40B-216ENST00000552301 HCG22E2RYF7 251 aa9.31□□□□□ -0.92
PRPF40B-216ENST00000552301 CXCL6P80162 114 aa9.29□□□□□ -0.92
PRPF40B-216ENST00000552301 ACYP1P07311 99 aa9.28□□□□□ -0.92
PRPF40B-216ENST00000552301 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
PRPF40B-216ENST00000552301 A0A1B0GV90 55 aa9.25□□□□□ -0.93
PRPF40B-216ENST00000552301 FSIP2Q5CZC0 6907 aa9.25□□□□□ -0.93
PRPF40B-216ENST00000552301 FAM240AA0A1B0GVK7 77 aa9.24□□□□□ -0.93
PRPF40B-216ENST00000552301 IGKV2D-30A0A075B6S6 120 aa9.23□□□□□ -0.93
PRPF40B-216ENST00000552301 IGKV2-30P06310 120 aa9.23□□□□□ -0.93
PRPF40B-216ENST00000552301 Q5W150 140 aa9.21□□□□□ -0.94
PRPF40B-216ENST00000552301 C7orf65Q6ZTY9 151 aa9.21□□□□□ -0.94
PRPF40B-216ENST00000552301 ATP5EP2Q5VTU8 51 aa9.18□□□□□ -0.94
PRPF40B-216ENST00000552301 CRCT1Q9UGL9 99 aa9.18□□□□□ -0.94
PRPF40B-216ENST00000552301 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
PRPF40B-216ENST00000552301 LOC100996750A0A140TA64 210 aa9.11□□□□□ -0.95
PRPF40B-216ENST00000552301 KRTAP4-6Q9BYQ5 205 aa9.11□□□□□ -0.95
PRPF40B-216ENST00000552301 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
PRPF40B-216ENST00000552301 LINC00643Q86TS7 51 aa9.06□□□□□ -0.96
PRPF40B-216ENST00000552301 J3QR89 54 aa9.05□□□□□ -0.96
PRPF40B-216ENST00000552301 H1FX-AS1Q4G0G2 97 aa9.04□□□□□ -0.96
PRPF40B-216ENST00000552301 KRTAP9-8Q9BYQ0 159 aa9.02□□□□□ -0.97
PRPF40B-216ENST00000552301 C4orf26Q17RF5 130 aa9□□□□□ -0.97
PRPF40B-216ENST00000552301 TRAV22A0A0B4J277 110 aa8.96□□□□□ -0.98
PRPF40B-216ENST00000552301 MT2AP02795 61 aa8.95□□□□□ -0.98
PRPF40B-216ENST00000552301 A0A087WVE0 104 aa8.94□□□□□ -0.98
PRPF40B-216ENST00000552301 UQCRQO14949 82 aa8.92□□□□□ -0.98
PRPF40B-216ENST00000552301 LOC101927531A0A1B0GV80 90 aa8.9□□□□□ -0.98
PRPF40B-216ENST00000552301 KRTAP10-10P60014 251 aa8.9□□□□□ -0.98
PRPF40B-216ENST00000552301 C1orf64Q8NEQ6 169 aa8.88□□□□□ -0.99
PRPF40B-216ENST00000552301 MT1FP04733 61 aa8.87□□□□□ -0.99
PRPF40B-216ENST00000552301 CYP4F30PQ9H0H9 118 aa8.87□□□□□ -0.99
PRPF40B-216ENST00000552301 H0Y9P7 68 aa8.86□□□□□ -0.99
PRPF40B-216ENST00000552301 ATOX1O00244 68 aa8.86□□□□□ -0.99
PRPF40B-216ENST00000552301 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
PRPF40B-216ENST00000552301 S4R3F8 94 aa8.8□□□□□ -1
PRPF40B-216ENST00000552301 K7ERU9 68 aa8.77□□□□□ -1.01
PRPF40B-216ENST00000552301 MP68P56378 58 aa8.76□□□□□ -1.01
PRPF40B-216ENST00000552301 SSPOA2VEC9 5147 aa8.75□□□□□ -1.01
PRPF40B-216ENST00000552301 C5orf47Q569G3 176 aa8.75□□□□□ -1.01
PRPF40B-216ENST00000552301 OCR1Q9BZK8 76 aa8.75□□□□□ -1.01
PRPF40B-216ENST00000552301 USH2AO75445 5202 aa8.75□□□□□ -1.01
PRPF40B-216ENST00000552301 SCGB1A1P11684 91 aa8.74□□□□□ -1.01
PRPF40B-216ENST00000552301 LINC00208Q96KT6 92 aa8.74□□□□□ -1.01
PRPF40B-216ENST00000552301 KRTAP9-3Q9BYQ3 159 aa8.73□□□□□ -1.01
PRPF40B-216ENST00000552301 CSAG1Q6PB30 78 aa8.7□□□□□ -1.02
PRPF40B-216ENST00000552301 LCA10Q71F78 164 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms