RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 Q75L30 129 aa14.07□□□□□ -0.16
NPAS3-211ENST00000551634 PMAIP1Q13794 54 aa14.04□□□□□ -0.16
NPAS3-211ENST00000551634 VPS13DQ5THJ4 4388 aa14.02□□□□□ -0.16
NPAS3-211ENST00000551634 ANAPC11Q9NYG5 84 aa14.02□□□□□ -0.17
NPAS3-211ENST00000551634 A0A087X002 238 aa13.99□□□□□ -0.17
NPAS3-211ENST00000551634 NOTCH2NLQ7Z3S9 236 aa13.99□□□□□ -0.17
NPAS3-211ENST00000551634 STARD9Q9P2P6 4700 aa13.99□□□□□ -0.17
NPAS3-211ENST00000551634 LINC01558Q9Y6Z2 57 aa13.99□□□□□ -0.17
NPAS3-211ENST00000551634 A8MU10 97 aa13.97□□□□□ -0.17
NPAS3-211ENST00000551634 HECTD4Q9Y4D8 3996 aa13.95□□□□□ -0.18
NPAS3-211ENST00000551634 HRES1P13985 223 aa13.94□□□□□ -0.18
NPAS3-211ENST00000551634 DNAH8Q96JB1 4490 aa13.94□□□□□ -0.18
NPAS3-211ENST00000551634 A6NED7 52 aa13.92□□□□□ -0.18
NPAS3-211ENST00000551634 IGLV7-43P04211 117 aa13.9□□□□□ -0.18
NPAS3-211ENST00000551634 SPAG11AQ6PDA7 123 aa13.9□□□□□ -0.18
NPAS3-211ENST00000551634 DNAH17Q9UFH2 4485 aa13.89□□□□□ -0.19
NPAS3-211ENST00000551634 KRTAP13-3Q3SY46 172 aa13.89□□□□□ -0.19
NPAS3-211ENST00000551634 LCA10Q71F78 164 aa13.89□□□□□ -0.19
NPAS3-211ENST00000551634 SPINK6Q6UWN8 80 aa13.88□□□□□ -0.19
NPAS3-211ENST00000551634 ATP11AUNQ6ZP68 121 aa13.88□□□□□ -0.19
NPAS3-211ENST00000551634 KMT2CQ8NEZ4 4911 aaKnown RBP13.87□□□□□ -0.19
NPAS3-211ENST00000551634 Q5W150 140 aa13.85□□□□□ -0.19
NPAS3-211ENST00000551634 SSBP3-AS1Q7Z2R9 100 aa13.85□□□□□ -0.19
NPAS3-211ENST00000551634 C8orf87E5RJ46 101 aa13.85□□□□□ -0.19
NPAS3-211ENST00000551634 SEC61GP60059 68 aa13.84□□□□□ -0.19
NPAS3-211ENST00000551634 CDC42SE1Q9NRR8 79 aa13.84□□□□□ -0.19
NPAS3-211ENST00000551634 CIRBP-AS1Q8TBR5 109 aa13.83□□□□□ -0.2
NPAS3-211ENST00000551634 FRAS1Q86XX4 4008 aa13.79□□□□□ -0.2
NPAS3-211ENST00000551634 C1orf134Q5TEV5 83 aa13.79□□□□□ -0.2
NPAS3-211ENST00000551634 SPTSSBQ8NFR3 76 aa13.77□□□□□ -0.2
NPAS3-211ENST00000551634 DNAH2Q9P225 4427 aa13.75□□□□□ -0.21
NPAS3-211ENST00000551634 KMT2AQ03164 3969 aa13.74□□□□□ -0.21
NPAS3-211ENST00000551634 ACYP2P14621 99 aa13.73□□□□□ -0.21
NPAS3-211ENST00000551634 HYDINQ4G0P3 5121 aa13.71□□□□□ -0.21
NPAS3-211ENST00000551634 LINC00313P59037 77 aa13.68□□□□□ -0.22
NPAS3-211ENST00000551634 KTN1-AS1Q86SY8 53 aa13.68□□□□□ -0.22
NPAS3-211ENST00000551634 FAM229AH3BQW9 127 aa13.68□□□□□ -0.22
NPAS3-211ENST00000551634 PRR26Q8N8Z3 221 aa13.68□□□□□ -0.22
NPAS3-211ENST00000551634 A6NN06 94 aa13.66□□□□□ -0.22
NPAS3-211ENST00000551634 SPINK7P58062 85 aa13.65□□□□□ -0.22
NPAS3-211ENST00000551634 DMAC1Q96GE9 116 aa13.65□□□□□ -0.22
NPAS3-211ENST00000551634 RYR3Q15413 4870 aa13.58□□□□□ -0.23
NPAS3-211ENST00000551634 IGKV2-30P06310 120 aa13.57□□□□□ -0.24
NPAS3-211ENST00000551634 ALMS1Q8TCU4 4167 aa13.57□□□□□ -0.24
NPAS3-211ENST00000551634 KRTAP13-2Q52LG2 175 aa13.55□□□□□ -0.24
NPAS3-211ENST00000551634 LY6G6CO95867 125 aa13.53□□□□□ -0.24
NPAS3-211ENST00000551634 SACSQ9NZJ4 4579 aa13.51□□□□□ -0.25
NPAS3-211ENST00000551634 KRTAP10-2P60368 255 aa13.51□□□□□ -0.25
NPAS3-211ENST00000551634 DNAH11Q96DT5 4516 aa13.5□□□□□ -0.25
NPAS3-211ENST00000551634 KRTAP16-1A8MUX0 517 aa13.5□□□□□ -0.25
NPAS3-211ENST00000551634 Q6ZSA8 131 aa13.47□□□□□ -0.25
NPAS3-211ENST00000551634 RETNLBQ9BQ08 111 aa13.46□□□□□ -0.25
NPAS3-211ENST00000551634 DNAH5Q8TE73 4624 aa13.44□□□□□ -0.26
NPAS3-211ENST00000551634 C7orf65Q6ZTY9 151 aa13.44□□□□□ -0.26
NPAS3-211ENST00000551634 DNAH6Q9C0G6 4158 aa13.42□□□□□ -0.26
NPAS3-211ENST00000551634 A0A1B0GU69 56 aa13.39□□□□□ -0.27
NPAS3-211ENST00000551634 KRTAP1-4P0C5Y4 121 aa13.38□□□□□ -0.27
NPAS3-211ENST00000551634 KRTAP10-1P60331 282 aa13.36□□□□□ -0.27
NPAS3-211ENST00000551634 RBM12B-AS1Q9P1G2 102 aa13.35□□□□□ -0.27
NPAS3-211ENST00000551634 IGKV2D-30A0A075B6S6 120 aa13.3□□□□□ -0.28
NPAS3-211ENST00000551634 RYR2Q92736 4967 aa13.3□□□□□ -0.28
NPAS3-211ENST00000551634 C4orf48Q5BLP8 95 aa13.29□□□□□ -0.28
NPAS3-211ENST00000551634 SPATA8Q6RVD6 105 aa13.28□□□□□ -0.28
NPAS3-211ENST00000551634 LRP1BQ9NZR2 4599 aa13.28□□□□□ -0.28
NPAS3-211ENST00000551634 SPINK1P00995 79 aa13.26□□□□□ -0.29
NPAS3-211ENST00000551634 PLA2G1BP04054 148 aaKnown RBP13.22□□□□□ -0.29
NPAS3-211ENST00000551634 TYMSOSQ8TAI1 123 aa13.22□□□□□ -0.29
NPAS3-211ENST00000551634 UQCR11O14957 56 aa13.21□□□□□ -0.29
NPAS3-211ENST00000551634 PKD1P98161 4303 aa13.21□□□□□ -0.3
NPAS3-211ENST00000551634 PKHD1P08F94 4074 aa13.19□□□□□ -0.3
NPAS3-211ENST00000551634 MIR22HGQ0VDD5 57 aa13.17□□□□□ -0.3
NPAS3-211ENST00000551634 EPPK1P58107 5090 aaKnown RBP13.15□□□□□ -0.3
NPAS3-211ENST00000551634 RPS29P62273 56 aaKnown RBP13.12□□□□□ -0.31
NPAS3-211ENST00000551634 VPS13BQ7Z7G8 4022 aa13.1□□□□□ -0.31
NPAS3-211ENST00000551634 FAT2Q9NYQ8 4349 aa13.09□□□□□ -0.31
NPAS3-211ENST00000551634 LINC00304Q8N9R0 145 aa13.04□□□□□ -0.32
NPAS3-211ENST00000551634 Q8N1X5 172 aa12.97□□□□□ -0.33
NPAS3-211ENST00000551634 PRAC1Q96KF2 57 aa12.94□□□□□ -0.34
NPAS3-211ENST00000551634 ADM2Q7Z4H4 148 aa12.9□□□□□ -0.35
NPAS3-211ENST00000551634 C20orf166-AS1Q96NR2 134 aa12.87□□□□□ -0.35
NPAS3-211ENST00000551634 A8MUU9 505 aa12.87□□□□□ -0.35
NPAS3-211ENST00000551634 KIAA1109Q2LD37 5005 aa12.77□□□□□ -0.37
NPAS3-211ENST00000551634 C9orf92A6NGG3 77 aa12.75□□□□□ -0.37
NPAS3-211ENST00000551634 DYNC1H1Q14204 4646 aaKnown RBP12.72□□□□□ -0.37
NPAS3-211ENST00000551634 KRTAP3-1Q9BYR8 98 aa12.71□□□□□ -0.37
NPAS3-211ENST00000551634 SMR3BP02814 79 aaPredicted RBP12.69□□□□□ -0.38
NPAS3-211ENST00000551634 LINC01554Q52M75 96 aa12.69□□□□□ -0.38
NPAS3-211ENST00000551634 H0YAA0 97 aa12.66□□□□□ -0.38
NPAS3-211ENST00000551634 FAT1Q14517 4588 aa12.65□□□□□ -0.38
NPAS3-211ENST00000551634 PKHD1L1Q86WI1 4243 aa12.64□□□□□ -0.39
NPAS3-211ENST00000551634 A0A1B0GU33 70 aa12.62□□□□□ -0.39
NPAS3-211ENST00000551634 KRTAP10-4P60372 401 aaPredicted RBP12.62□□□□□ -0.39
NPAS3-211ENST00000551634 CSAG1Q6PB30 78 aa12.59□□□□□ -0.39
NPAS3-211ENST00000551634 H1FX-AS1Q4G0G2 97 aa12.57□□□□□ -0.4
NPAS3-211ENST00000551634 APOBP04114 4563 aaKnown RBP12.56□□□□□ -0.4
NPAS3-211ENST00000551634 A0A1B0GVY2 172 aa12.53□□□□□ -0.4
NPAS3-211ENST00000551634 COX6B2Q6YFQ2 88 aa12.53□□□□□ -0.4
NPAS3-211ENST00000551634 H3BS24 57 aa12.45□□□□□ -0.42
NPAS3-211ENST00000551634 HSPG2P98160 4391 aa12.42□□□□□ -0.42
NPAS3-211ENST00000551634 FLG2Q5D862 2391 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms