RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 FP248Q71RG6 208 aaPredicted RBP5.9□□□□□ -1.46
NEK3-203ENST00000551355 FAT3Q8TDW7 4589 aa5.89□□□□□ -1.47
NEK3-203ENST00000551355 A8MWP4 228 aa5.89□□□□□ -1.47
NEK3-203ENST00000551355 MYCBP2O75592 4640 aa5.89□□□□□ -1.47
NEK3-203ENST00000551355 DEFB116Q30KQ4 102 aa5.88□□□□□ -1.47
NEK3-203ENST00000551355 TNXBP22105 4242 aa5.87□□□□□ -1.47
NEK3-203ENST00000551355 DSCR10P59022 87 aa5.86□□□□□ -1.47
NEK3-203ENST00000551355 PRR15Q8IV56 129 aa5.86□□□□□ -1.47
NEK3-203ENST00000551355 IMUPQ9GZP8 106 aa5.86□□□□□ -1.47
NEK3-203ENST00000551355 IGKV3D-7A0A0C4DH55 119 aa5.85□□□□□ -1.47
NEK3-203ENST00000551355 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
NEK3-203ENST00000551355 A0A1B0GVX0 72 aa5.84□□□□□ -1.47
NEK3-203ENST00000551355 C8orf87E5RJ46 101 aa5.84□□□□□ -1.47
NEK3-203ENST00000551355 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
NEK3-203ENST00000551355 DMBT1Q9UGM3 2413 aaPredicted RBP5.83□□□□□ -1.48
NEK3-203ENST00000551355 RETNLBQ9BQ08 111 aa5.83□□□□□ -1.48
NEK3-203ENST00000551355 ABCA13Q86UQ4 5058 aa5.83□□□□□ -1.48
NEK3-203ENST00000551355 K7EQZ3 153 aa5.82□□□□□ -1.48
NEK3-203ENST00000551355 HIST1H4AP62805 103 aaKnown RBP5.82□□□□□ -1.48
NEK3-203ENST00000551355 IGLV7-46A0A075B6I9 117 aa5.81□□□□□ -1.48
NEK3-203ENST00000551355 IGHV6-1A0A0B4J1U7 121 aa5.81□□□□□ -1.48
NEK3-203ENST00000551355 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
NEK3-203ENST00000551355 MT-ATP8P03928 68 aa5.81□□□□□ -1.48
NEK3-203ENST00000551355 LINC00313P59037 77 aa5.8□□□□□ -1.48
NEK3-203ENST00000551355 PRR4Q16378 134 aa5.8□□□□□ -1.48
NEK3-203ENST00000551355 Q8N9L7 120 aa5.79□□□□□ -1.48
NEK3-203ENST00000551355 C8orf17Q9NRJ1 99 aa5.79□□□□□ -1.48
NEK3-203ENST00000551355 HCG22E2RYF7 251 aa5.78□□□□□ -1.48
NEK3-203ENST00000551355 hDV103S1A0JD37 113 aa5.76□□□□□ -1.49
NEK3-203ENST00000551355 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
NEK3-203ENST00000551355 CASC2Q6XLA1 102 aa5.76□□□□□ -1.49
NEK3-203ENST00000551355 MMP24-AS1A0A0U1RRL7 71 aa5.75□□□□□ -1.49
NEK3-203ENST00000551355 TMEM254Q8TBM7 123 aa5.75□□□□□ -1.49
NEK3-203ENST00000551355 A0A087WVE0 104 aa5.73□□□□□ -1.49
NEK3-203ENST00000551355 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
NEK3-203ENST00000551355 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
NEK3-203ENST00000551355 WFDC13Q8IUB5 93 aa5.72□□□□□ -1.49
NEK3-203ENST00000551355 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
NEK3-203ENST00000551355 C9orf92A6NGG3 77 aa5.71□□□□□ -1.5
NEK3-203ENST00000551355 SCGB1A1P11684 91 aa5.71□□□□□ -1.5
NEK3-203ENST00000551355 PCLOQ9Y6V0 5065 aa5.7□□□□□ -1.5
NEK3-203ENST00000551355 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
NEK3-203ENST00000551355 Q8N9P0 234 aaPredicted RBP5.7□□□□□ -1.5
NEK3-203ENST00000551355 TP53AIP1Q9HCN2 124 aa5.69□□□□□ -1.5
NEK3-203ENST00000551355 FAM236AA0A1B0GUQ0 79 aa5.68□□□□□ -1.5
NEK3-203ENST00000551355 FAM236BA0A1B0GV22 79 aa5.68□□□□□ -1.5
NEK3-203ENST00000551355 SMIM20Q8N5G0 67 aa5.68□□□□□ -1.5
NEK3-203ENST00000551355 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
NEK3-203ENST00000551355 A8MUU9 505 aa5.67□□□□□ -1.5
NEK3-203ENST00000551355 Q75L30 129 aa5.67□□□□□ -1.5
NEK3-203ENST00000551355 ATOX1O00244 68 aa5.66□□□□□ -1.5
NEK3-203ENST00000551355 NDUFS5O43920 106 aa5.66□□□□□ -1.5
NEK3-203ENST00000551355 UQCRQO14949 82 aa5.64□□□□□ -1.51
NEK3-203ENST00000551355 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
NEK3-203ENST00000551355 RPL37P61927 97 aaKnown RBP5.63□□□□□ -1.51
NEK3-203ENST00000551355 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
NEK3-203ENST00000551355 ATP11AUNQ6ZP68 121 aa5.62□□□□□ -1.51
NEK3-203ENST00000551355 OCR1Q9BZK8 76 aa5.62□□□□□ -1.51
NEK3-203ENST00000551355 TRAV7A0A075B6U4 112 aa5.6□□□□□ -1.51
NEK3-203ENST00000551355 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.51
NEK3-203ENST00000551355 C5orf47Q569G3 176 aa5.59□□□□□ -1.51
NEK3-203ENST00000551355 ZCCHC13Q8WW36 166 aaKnown RBP5.59□□□□□ -1.51
NEK3-203ENST00000551355 TRAV22A0A0B4J277 110 aa5.57□□□□□ -1.52
NEK3-203ENST00000551355 MP68P56378 58 aa5.57□□□□□ -1.52
NEK3-203ENST00000551355 SERP2Q8N6R1 65 aa5.57□□□□□ -1.52
NEK3-203ENST00000551355 H3BPC8 53 aa5.55□□□□□ -1.52
NEK3-203ENST00000551355 ANAPC13Q9BS18 74 aa5.55□□□□□ -1.52
NEK3-203ENST00000551355 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
NEK3-203ENST00000551355 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
NEK3-203ENST00000551355 HERC1Q15751 4861 aa5.54□□□□□ -1.52
NEK3-203ENST00000551355 H0Y9P7 68 aa5.53□□□□□ -1.52
NEK3-203ENST00000551355 Q5W150 140 aa5.53□□□□□ -1.52
NEK3-203ENST00000551355 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
NEK3-203ENST00000551355 COX7CP15954 63 aa5.51□□□□□ -1.53
NEK3-203ENST00000551355 PCOTHQ58A44 107 aa5.51□□□□□ -1.53
NEK3-203ENST00000551355 KRTAP19-1Q8IUB9 90 aa5.51□□□□□ -1.53
NEK3-203ENST00000551355 C1orf64Q8NEQ6 169 aa5.49□□□□□ -1.53
NEK3-203ENST00000551355 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
NEK3-203ENST00000551355 C7orf65Q6ZTY9 151 aa5.48□□□□□ -1.53
NEK3-203ENST00000551355 LINC00208Q96KT6 92 aa5.48□□□□□ -1.53
NEK3-203ENST00000551355 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
NEK3-203ENST00000551355 IGKV2-30P06310 120 aa5.47□□□□□ -1.53
NEK3-203ENST00000551355 LPAP08519 4548 aa5.47□□□□□ -1.53
NEK3-203ENST00000551355 SPINK7P58062 85 aa5.46□□□□□ -1.54
NEK3-203ENST00000551355 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
NEK3-203ENST00000551355 A0A0U1RQV1 116 aa5.45□□□□□ -1.54
NEK3-203ENST00000551355 C20orf197Q8N268 126 aa5.45□□□□□ -1.54
NEK3-203ENST00000551355 CYP4F30PQ9H0H9 118 aa5.45□□□□□ -1.54
NEK3-203ENST00000551355 KLKP1Q107X0 134 aa5.44□□□□□ -1.54
NEK3-203ENST00000551355 LRP2P98164 4655 aa5.42□□□□□ -1.54
NEK3-203ENST00000551355 NDUFC1O43677 76 aa5.42□□□□□ -1.54
NEK3-203ENST00000551355 SNURFQ9Y675 71 aa5.4□□□□□ -1.54
NEK3-203ENST00000551355 CCDC179H3BU77 68 aa5.37□□□□□ -1.55
NEK3-203ENST00000551355 PCP4P48539 62 aa5.37□□□□□ -1.55
NEK3-203ENST00000551355 RBM12B-AS1Q9P1G2 102 aa5.36□□□□□ -1.55
NEK3-203ENST00000551355 HRES1P13985 223 aa5.35□□□□□ -1.55
NEK3-203ENST00000551355 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
NEK3-203ENST00000551355 SPANXA2-OT1Q8N9U9 137 aa5.33□□□□□ -1.56
NEK3-203ENST00000551355 KRTAP4-1Q9BYQ7 146 aa5.33□□□□□ -1.56
NEK3-203ENST00000551355 H7BZZ5 65 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms