RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 C1orf195Q5TG92 126 aa6.61□□□□□ -1.35
RAB5C-208ENST00000551338 MRPL34Q9BQ48 92 aaKnown RBP6.61□□□□□ -1.35
RAB5C-208ENST00000551338 PRR26Q8N8Z3 221 aa6.6□□□□□ -1.35
RAB5C-208ENST00000551338 LIMD2Q9BT23 127 aa6.6□□□□□ -1.35
RAB5C-208ENST00000551338 DYNC1H1Q14204 4646 aaKnown RBP6.59□□□□□ -1.35
RAB5C-208ENST00000551338 OXTP01178 125 aa6.59□□□□□ -1.35
RAB5C-208ENST00000551338 MP68P56378 58 aa6.59□□□□□ -1.35
RAB5C-208ENST00000551338 ATP5EP56381 51 aaPredicted RBP6.59□□□□□ -1.35
RAB5C-208ENST00000551338 RPS28P62857 69 aaKnown RBP6.59□□□□□ -1.35
RAB5C-208ENST00000551338 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
RAB5C-208ENST00000551338 H3BPC8 53 aa6.58□□□□□ -1.36
RAB5C-208ENST00000551338 RYR2Q92736 4967 aa6.58□□□□□ -1.36
RAB5C-208ENST00000551338 TRAV22A0A0B4J277 110 aa6.57□□□□□ -1.36
RAB5C-208ENST00000551338 LINC00208Q96KT6 92 aa6.57□□□□□ -1.36
RAB5C-208ENST00000551338 TP53AIP1Q9HCN2 124 aa6.57□□□□□ -1.36
RAB5C-208ENST00000551338 SPINK1P00995 79 aa6.55□□□□□ -1.36
RAB5C-208ENST00000551338 C4orf48Q5BLP8 95 aa6.55□□□□□ -1.36
RAB5C-208ENST00000551338 LINC00304Q8N9R0 145 aa6.55□□□□□ -1.36
RAB5C-208ENST00000551338 SERP1Q9Y6X1 66 aa6.55□□□□□ -1.36
RAB5C-208ENST00000551338 NDUFS5O43920 106 aa6.54□□□□□ -1.36
RAB5C-208ENST00000551338 LCE2DQ5TA82 110 aaPredicted RBP6.54□□□□□ -1.36
RAB5C-208ENST00000551338 RPS29P62273 56 aaKnown RBP6.53□□□□□ -1.36
RAB5C-208ENST00000551338 C1orf64Q8NEQ6 169 aa6.52□□□□□ -1.37
RAB5C-208ENST00000551338 APOBP04114 4563 aaKnown RBP6.51□□□□□ -1.37
RAB5C-208ENST00000551338 KRTAP16-1A8MUX0 517 aa6.51□□□□□ -1.37
RAB5C-208ENST00000551338 LINC00313P59037 77 aa6.51□□□□□ -1.37
RAB5C-208ENST00000551338 KRTAP13-3Q3SY46 172 aa6.5□□□□□ -1.37
RAB5C-208ENST00000551338 SPAG11AQ6PDA7 123 aa6.5□□□□□ -1.37
RAB5C-208ENST00000551338 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
RAB5C-208ENST00000551338 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
RAB5C-208ENST00000551338 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
RAB5C-208ENST00000551338 CYP4F30PQ9H0H9 118 aa6.48□□□□□ -1.37
RAB5C-208ENST00000551338 Q5W150 140 aa6.47□□□□□ -1.37
RAB5C-208ENST00000551338 Q8N9P0 234 aaPredicted RBP6.47□□□□□ -1.37
RAB5C-208ENST00000551338 PKHD1P08F94 4074 aa6.46□□□□□ -1.37
RAB5C-208ENST00000551338 PRR4Q16378 134 aa6.45□□□□□ -1.38
RAB5C-208ENST00000551338 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
RAB5C-208ENST00000551338 PKHD1L1Q86WI1 4243 aa6.44□□□□□ -1.38
RAB5C-208ENST00000551338 FAM229AH3BQW9 127 aa6.44□□□□□ -1.38
RAB5C-208ENST00000551338 Q5VSD8 79 aa6.44□□□□□ -1.38
RAB5C-208ENST00000551338 PCOTHQ58A44 107 aa6.42□□□□□ -1.38
RAB5C-208ENST00000551338 KRTAP17-1Q9BYP8 105 aa6.42□□□□□ -1.38
RAB5C-208ENST00000551338 LOC101927531A0A1B0GV80 90 aa6.41□□□□□ -1.38
RAB5C-208ENST00000551338 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
RAB5C-208ENST00000551338 KMT2CQ8NEZ4 4911 aaKnown RBP6.38□□□□□ -1.39
RAB5C-208ENST00000551338 IGLV7-46A0A075B6I9 117 aa6.38□□□□□ -1.39
RAB5C-208ENST00000551338 FP248Q71RG6 208 aaPredicted RBP6.38□□□□□ -1.39
RAB5C-208ENST00000551338 RETNLBQ9BQ08 111 aa6.38□□□□□ -1.39
RAB5C-208ENST00000551338 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
RAB5C-208ENST00000551338 FAT1Q14517 4588 aa6.36□□□□□ -1.39
RAB5C-208ENST00000551338 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
RAB5C-208ENST00000551338 Q8N1X5 172 aa6.35□□□□□ -1.39
RAB5C-208ENST00000551338 FLG2Q5D862 2391 aaPredicted RBP6.33□□□□□ -1.4
RAB5C-208ENST00000551338 C9orf92A6NGG3 77 aa6.31□□□□□ -1.4
RAB5C-208ENST00000551338 A8MUU9 505 aa6.3□□□□□ -1.4
RAB5C-208ENST00000551338 C4orf26Q17RF5 130 aa6.3□□□□□ -1.4
RAB5C-208ENST00000551338 COA5Q86WW8 74 aa6.29□□□□□ -1.4
RAB5C-208ENST00000551338 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
RAB5C-208ENST00000551338 HSPG2P98160 4391 aa6.28□□□□□ -1.4
RAB5C-208ENST00000551338 HRES1P13985 223 aa6.28□□□□□ -1.4
RAB5C-208ENST00000551338 IGKV2D-30A0A075B6S6 120 aa6.26□□□□□ -1.41
RAB5C-208ENST00000551338 RYR3Q15413 4870 aa6.26□□□□□ -1.41
RAB5C-208ENST00000551338 RYR1P21817 5038 aa6.25□□□□□ -1.41
RAB5C-208ENST00000551338 MT1HL1P0DM35 61 aa6.25□□□□□ -1.41
RAB5C-208ENST00000551338 MPLKIPQ8TAP9 179 aa6.25□□□□□ -1.41
RAB5C-208ENST00000551338 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
RAB5C-208ENST00000551338 Q1T7F1 81 aa6.22□□□□□ -1.41
RAB5C-208ENST00000551338 C7orf65Q6ZTY9 151 aa6.21□□□□□ -1.42
RAB5C-208ENST00000551338 Q75L30 129 aa6.19□□□□□ -1.42
RAB5C-208ENST00000551338 ACYP2P14621 99 aa6.17□□□□□ -1.42
RAB5C-208ENST00000551338 TNXBP22105 4242 aa6.17□□□□□ -1.42
RAB5C-208ENST00000551338 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
RAB5C-208ENST00000551338 V9GYY9 64 aa6.15□□□□□ -1.42
RAB5C-208ENST00000551338 KRTAP4-5Q9BYR2 181 aa6.14□□□□□ -1.43
RAB5C-208ENST00000551338 LRP1Q07954 4544 aaKnown RBP6.14□□□□□ -1.43
RAB5C-208ENST00000551338 KIAA1109Q2LD37 5005 aa6.13□□□□□ -1.43
RAB5C-208ENST00000551338 RPL37P61927 97 aaKnown RBP6.11□□□□□ -1.43
RAB5C-208ENST00000551338 XP32Q5T750 250 aa6.11□□□□□ -1.43
RAB5C-208ENST00000551338 A8MUN3 132 aa6.1□□□□□ -1.43
RAB5C-208ENST00000551338 PSPHP1O15172 72 aa6.1□□□□□ -1.43
RAB5C-208ENST00000551338 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
RAB5C-208ENST00000551338 SPINK7P58062 85 aa6.09□□□□□ -1.43
RAB5C-208ENST00000551338 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
RAB5C-208ENST00000551338 Q5VV11 94 aa6.08□□□□□ -1.44
RAB5C-208ENST00000551338 PRR15LQ9BU68 103 aa6.08□□□□□ -1.44
RAB5C-208ENST00000551338 DMBT1Q9UGM3 2413 aaPredicted RBP6.06□□□□□ -1.44
RAB5C-208ENST00000551338 EPPK1P58107 5090 aaKnown RBP6.06□□□□□ -1.44
RAB5C-208ENST00000551338 ATP11AUNQ6ZP68 121 aa6.04□□□□□ -1.44
RAB5C-208ENST00000551338 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
RAB5C-208ENST00000551338 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
RAB5C-208ENST00000551338 COX6B2Q6YFQ2 88 aa5.99□□□□□ -1.45
RAB5C-208ENST00000551338 BRK1Q8WUW1 75 aa5.99□□□□□ -1.45
RAB5C-208ENST00000551338 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
RAB5C-208ENST00000551338 SVIPQ8NHG7 77 aa5.94□□□□□ -1.46
RAB5C-208ENST00000551338 A0A1B0GU69 56 aa5.9□□□□□ -1.46
RAB5C-208ENST00000551338 A6NED7 52 aa5.9□□□□□ -1.46
RAB5C-208ENST00000551338 A8MU10 97 aa5.9□□□□□ -1.46
RAB5C-208ENST00000551338 J3QL48 77 aa5.9□□□□□ -1.46
RAB5C-208ENST00000551338 SPTSSBQ8NFR3 76 aa5.89□□□□□ -1.47
RAB5C-208ENST00000551338 MYCBP2O75592 4640 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms