RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 IGHV6-1A0A0B4J1U7 121 aa8.4□□□□□ -1.06
SCN8A-207ENST00000551216 SPINK1P00995 79 aa8.4□□□□□ -1.06
SCN8A-207ENST00000551216 RPS29P62273 56 aaKnown RBP8.4□□□□□ -1.06
SCN8A-207ENST00000551216 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.07
SCN8A-207ENST00000551216 TYMSOSQ8TAI1 123 aa8.4□□□□□ -1.07
SCN8A-207ENST00000551216 LRP1BQ9NZR2 4599 aa8.39□□□□□ -1.07
SCN8A-207ENST00000551216 SPAG11AQ6PDA7 123 aa8.38□□□□□ -1.07
SCN8A-207ENST00000551216 MRPL34Q9BQ48 92 aaKnown RBP8.38□□□□□ -1.07
SCN8A-207ENST00000551216 TRAV22A0A0B4J277 110 aa8.36□□□□□ -1.07
SCN8A-207ENST00000551216 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
SCN8A-207ENST00000551216 C1orf195Q5TG92 126 aa8.35□□□□□ -1.07
SCN8A-207ENST00000551216 H0Y9P7 68 aa8.34□□□□□ -1.07
SCN8A-207ENST00000551216 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
SCN8A-207ENST00000551216 PKHD1P08F94 4074 aa8.34□□□□□ -1.07
SCN8A-207ENST00000551216 SERP1Q9Y6X1 66 aa8.32□□□□□ -1.08
SCN8A-207ENST00000551216 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
SCN8A-207ENST00000551216 LINC00208Q96KT6 92 aa8.31□□□□□ -1.08
SCN8A-207ENST00000551216 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
SCN8A-207ENST00000551216 LINC00313P59037 77 aa8.29□□□□□ -1.08
SCN8A-207ENST00000551216 RYR2Q92736 4967 aa8.29□□□□□ -1.08
SCN8A-207ENST00000551216 NOTCH2NLQ7Z3S9 236 aa8.28□□□□□ -1.08
SCN8A-207ENST00000551216 C1orf64Q8NEQ6 169 aa8.28□□□□□ -1.08
SCN8A-207ENST00000551216 NDUFS5O43920 106 aa8.27□□□□□ -1.09
SCN8A-207ENST00000551216 PRR26Q8N8Z3 221 aa8.27□□□□□ -1.09
SCN8A-207ENST00000551216 SPANXA2-OT1Q8N9U9 137 aa8.26□□□□□ -1.09
SCN8A-207ENST00000551216 FAM229AH3BQW9 127 aa8.25□□□□□ -1.09
SCN8A-207ENST00000551216 DYNC1H1Q14204 4646 aaKnown RBP8.24□□□□□ -1.09
SCN8A-207ENST00000551216 Q8N9P0 234 aaPredicted RBP8.24□□□□□ -1.09
SCN8A-207ENST00000551216 CYP4F30PQ9H0H9 118 aa8.24□□□□□ -1.09
SCN8A-207ENST00000551216 LOC101927531A0A1B0GV80 90 aa8.19□□□□□ -1.1
SCN8A-207ENST00000551216 KMT2CQ8NEZ4 4911 aaKnown RBP8.19□□□□□ -1.1
SCN8A-207ENST00000551216 KRTAP16-1A8MUX0 517 aa8.18□□□□□ -1.1
SCN8A-207ENST00000551216 KRTAP13-3Q3SY46 172 aa8.18□□□□□ -1.1
SCN8A-207ENST00000551216 APOBP04114 4563 aaKnown RBP8.17□□□□□ -1.1
SCN8A-207ENST00000551216 OXTP01178 125 aa8.17□□□□□ -1.1
SCN8A-207ENST00000551216 SMIM26A0A096LP01 95 aa8.15□□□□□ -1.1
SCN8A-207ENST00000551216 IGLV7-46A0A075B6I9 117 aa8.14□□□□□ -1.11
SCN8A-207ENST00000551216 Q5VSD8 79 aa8.11□□□□□ -1.11
SCN8A-207ENST00000551216 Q5W150 140 aa8.11□□□□□ -1.11
SCN8A-207ENST00000551216 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
SCN8A-207ENST00000551216 PCOTHQ58A44 107 aa8.05□□□□□ -1.12
SCN8A-207ENST00000551216 PKHD1L1Q86WI1 4243 aa8.03□□□□□ -1.12
SCN8A-207ENST00000551216 IGKV2-30P06310 120 aa8.03□□□□□ -1.12
SCN8A-207ENST00000551216 FAT1Q14517 4588 aa8.02□□□□□ -1.13
SCN8A-207ENST00000551216 PRR4Q16378 134 aa8.02□□□□□ -1.13
SCN8A-207ENST00000551216 FP248Q71RG6 208 aaPredicted RBP8□□□□□ -1.13
SCN8A-207ENST00000551216 Q8N1X5 172 aa8□□□□□ -1.13
SCN8A-207ENST00000551216 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
SCN8A-207ENST00000551216 A8MUU9 505 aa7.98□□□□□ -1.13
SCN8A-207ENST00000551216 FLG2Q5D862 2391 aaPredicted RBP7.97□□□□□ -1.13
SCN8A-207ENST00000551216 RYR3Q15413 4870 aa7.96□□□□□ -1.13
SCN8A-207ENST00000551216 Q1T7F1 81 aa7.95□□□□□ -1.14
SCN8A-207ENST00000551216 V9GYY9 64 aa7.95□□□□□ -1.14
SCN8A-207ENST00000551216 COA5Q86WW8 74 aa7.93□□□□□ -1.14
SCN8A-207ENST00000551216 HSPG2P98160 4391 aa7.93□□□□□ -1.14
SCN8A-207ENST00000551216 HRES1P13985 223 aa7.92□□□□□ -1.14
SCN8A-207ENST00000551216 ACYP2P14621 99 aa7.91□□□□□ -1.14
SCN8A-207ENST00000551216 C7orf65Q6ZTY9 151 aa7.91□□□□□ -1.14
SCN8A-207ENST00000551216 DMAC1Q96GE9 116 aa7.91□□□□□ -1.14
SCN8A-207ENST00000551216 RETNLBQ9BQ08 111 aa7.91□□□□□ -1.14
SCN8A-207ENST00000551216 C4orf26Q17RF5 130 aa7.9□□□□□ -1.14
SCN8A-207ENST00000551216 Q75L30 129 aa7.89□□□□□ -1.15
SCN8A-207ENST00000551216 RYR1P21817 5038 aa7.89□□□□□ -1.15
SCN8A-207ENST00000551216 C9orf92A6NGG3 77 aa7.89□□□□□ -1.15
SCN8A-207ENST00000551216 IGKV2D-30A0A075B6S6 120 aa7.88□□□□□ -1.15
SCN8A-207ENST00000551216 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
SCN8A-207ENST00000551216 KRTAP17-1Q9BYP8 105 aa7.85□□□□□ -1.15
SCN8A-207ENST00000551216 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
SCN8A-207ENST00000551216 A8MUN3 132 aa7.82□□□□□ -1.16
SCN8A-207ENST00000551216 TNXBP22105 4242 aa7.81□□□□□ -1.16
SCN8A-207ENST00000551216 DMBT1Q9UGM3 2413 aaPredicted RBP7.76□□□□□ -1.17
SCN8A-207ENST00000551216 CHKB-CPT1BH3BT56 60 aa7.75□□□□□ -1.17
SCN8A-207ENST00000551216 ATP11AUNQ6ZP68 121 aa7.74□□□□□ -1.17
SCN8A-207ENST00000551216 LINC01558Q9Y6Z2 57 aa7.74□□□□□ -1.17
SCN8A-207ENST00000551216 KIAA1109Q2LD37 5005 aa7.74□□□□□ -1.17
SCN8A-207ENST00000551216 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
SCN8A-207ENST00000551216 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
SCN8A-207ENST00000551216 SPINK7P58062 85 aa7.73□□□□□ -1.17
SCN8A-207ENST00000551216 FAT3Q8TDW7 4589 aa7.71□□□□□ -1.17
SCN8A-207ENST00000551216 XP32Q5T750 250 aa7.7□□□□□ -1.18
SCN8A-207ENST00000551216 EPPK1P58107 5090 aaKnown RBP7.69□□□□□ -1.18
SCN8A-207ENST00000551216 PSPHP1O15172 72 aa7.68□□□□□ -1.18
SCN8A-207ENST00000551216 BIRC6Q9NR09 4857 aa7.67□□□□□ -1.18
SCN8A-207ENST00000551216 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
SCN8A-207ENST00000551216 Q5VV11 94 aa7.65□□□□□ -1.18
SCN8A-207ENST00000551216 PRR15LQ9BU68 103 aa7.65□□□□□ -1.18
SCN8A-207ENST00000551216 SPTSSBQ8NFR3 76 aa7.63□□□□□ -1.19
SCN8A-207ENST00000551216 PRO0628Q9UI54 55 aa7.61□□□□□ -1.19
SCN8A-207ENST00000551216 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
SCN8A-207ENST00000551216 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
SCN8A-207ENST00000551216 MYCBP2O75592 4640 aa7.57□□□□□ -1.2
SCN8A-207ENST00000551216 BRK1Q8WUW1 75 aa7.57□□□□□ -1.2
SCN8A-207ENST00000551216 SVIPQ8NHG7 77 aa7.56□□□□□ -1.2
SCN8A-207ENST00000551216 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
SCN8A-207ENST00000551216 A0A1B0GU69 56 aa7.52□□□□□ -1.2
SCN8A-207ENST00000551216 J3QL48 77 aa7.5□□□□□ -1.21
SCN8A-207ENST00000551216 A6NED7 52 aa7.49□□□□□ -1.21
SCN8A-207ENST00000551216 SEC61GP60059 68 aa7.45□□□□□ -1.22
SCN8A-207ENST00000551216 CDC42SE1Q9NRR8 79 aa7.45□□□□□ -1.22
SCN8A-207ENST00000551216 SEC61BP60468 96 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms